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KJC3_010865-T1, KJC3_010865-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010865-T1
Unique NameKJC3_010865-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4552033..4553684+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010865-T1 ID=KJC3_010865-T1|Name=KJC3_010865-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1652bp|location=Sequence derived from alignment at ch7:4552033..4553684+ (Aspergillus niger KJC3)
CGGTATCCCTGGCTGAAGCGCCCATCGCCGTTAGAGATTGATACCCGGGT
GGATCGGAGGGTCCCCTTGGTCTTTCCACCAATAATGGAGGTATCTCACT
GCTTTGTTCAGGAACAGAAGCTTAGCATGGACCAGTCTTTCACGTATAAA
ACTCTCCAGGACTTCCGTCGTTGAGATGCTCTATCCAACAACACCTCACT
CTTCCACTCCTTGTTCTTTCTTTCTGTTGACCAGACCCCATCCATTCTTT
TGGCCGAAACCTGTTCTGTTGACCAGAACCTATACCAACAATCACCATGC
ACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTCTCTGCC
GCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTCTACCTG
CACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCTGCTCCG
ATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTCGACCTG
TCCGATGCTGCTGATGGCTCCACCGTATGTGCTCTCAGCCGTCTTCCATC
CTGGCTATCACGCTAACACCATCTAGATCACCTTCGAGGGCACCACTTCC
TTCGGATACAAGGAATGGAAGGGCCCCCTGATCCGCTTCGGTGGTAAGGA
TCTGACTGTCACCATGGCCGACGGCGCTGTCATCGACGGTGACGGTTCCC
GCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAGCCCAAGTTC
ATGTACATCCACGATGTTGAGGACTCGACCTTCAAGGGCATCAACATCAA
GAACACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACGTCCACCTGA
ACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGTGGCCACAAC
ACCGACGGTTTCGACATCAGCGAGTCTACCGGTGTCTACATCAGCGGTGC
TACCGTCAAGAACCAGGACGACTGCATTGCCATCAACTCTGGCGAGGCAC
GATATCCCTATTCCACTATCATTCCTTCCATTCATATCGCTAACAATCAA
ACCCACAGAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCACGGT
CTCTCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGAACGT
GACCATCTCCGACTCCACTGTCAGCAACTCCGCCAACGGTGTCCGCATCA
AGACCATCTACAAGGAGACCGGTGATGTCAGCGAGATCACCTACTCTAAC
ATCCAGCTCTCCGGAATCACCGACTACGGTATCGTCATCGAGCAGGACTA
CGAGAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATCACTG
ATGTCACCGTTGACGGTGTCACCGGTACTCTCGAGGATGACGCCACCCAG
GTCTACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGTCCGG
TGTTGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTTCCTT
CCGGTGCTTCTTGCTAAATCGTTCCTCCGGATGCGAGGCAACGTCTGTAG
GACGTCTGGTTGTATATATCGATCCACACTTGACATGTACTAGTTAGGTG
GTTTTACTGCCATAGTGTTAGTGAATAATAGGAGCTTTGCTCAATATGTG
AA
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Coding sequence (CDS) from alignment at ch7:4552033..4553684+

>KJC3_010865-T1 ID=KJC3_010865-T1|Name=KJC3_010865-T1|organism=Aspergillus niger KJC3|type=CDS|length=3321bp|location=Sequence derived from alignment at ch7:4552033..4553684+ (Aspergillus niger KJC3)
ATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTCTC
TGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTCTA
CCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCTGC
TCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTCGA
CCTGTCCGATGCTGCTGATGGCTCCACCATCACCTTCGAGGGCACCACTT
CCTTCGGATACAAGGAATGGAAGGGCCCCCTGATCCGCTTCGGTGGTAAG
GATCTGACTGTCACCATGGCCGACGGCGCTGTCATCGACGGTGACGGTTC
CCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAGCCCAAGT
TCATGTACATCCACGATGTTGAGGACTCGACCTTCAAGGGCATCAACATC
AAGAACACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACGTCCACCT
GAACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGTGGCCACA
ACACCGACGGTTTCGACATCAGCGAGTCTACCGGTGTCTACATCAGCGGT
GCTACCGTCAAGAACCAGGACGACTGCATTGCCATCAACTCTGGCGAGAG
CATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCACGGTCTCTCCATCG
GCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGAACGTGACCATCTCC
GACTCCACTGTCAGCAACTCCGCCAACGGTGTCCGCATCAAGACCATCTA
CAAGGAGACCGGTGATGTCAGCGAGATCACCTACTCTAACATCCAGCTCT
CCGGAATCACCGACTACGGTATCGTCATCGAGCAGGACTACGAGAACGGC
TCTCCCACCGGCACCCCCTCCACCGGTATCCCCATCACTGATGTCACCGT
TGACGGTGTCACCGGTACTCTCGAGGATGACGCCACCCAGGTCTACATTC
TCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGTCCGGTGTTGACCTC
TCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTTCCTTCCGGTGCTTC
TTGCTAAATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCC
TCGTCTCTGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAG
GCCTCTACCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTC
CAGCTGCTCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGA
CCCTCGACCTGTCCGATGCTGCTGATGGCTCCACCATCACCTTCGAGGGC
ACCACTTCCTTCGGATACAAGGAATGGAAGGGCCCCCTGATCCGCTTCGG
TGGTAAGGATCTGACTGTCACCATGGCCGACGGCGCTGTCATCGACGGTG
ACGGTTCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAG
CCCAAGTTCATGTACATCCACGATGTTGAGGACTCGACCTTCAAGGGCAT
CAACATCAAGAACACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACG
TCCACCTGAACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGT
GGCCACAACACCGACGGTTTCGACATCAGCGAGTCTACCGGTGTCTACAT
CAGCGGTGCTACCGTCAAGAACCAGGACGACTGCATTGCCATCAACTCTG
GCGAGAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCACGGTCTC
TCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGAACGTGAC
CATCTCCGACTCCACTGTCAGCAACTCCGCCAACGGTGTCCGCATCAAGA
CCATCTACAAGGAGACCGGTGATGTCAGCGAGATCACCTACTCTAACATC
CAGCTCTCCGGAATCACCGACTACGGTATCGTCATCGAGCAGGACTACGA
GAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATCACTGATG
TCACCGTTGACGGTGTCACCGGTACTCTCGAGGATGACGCCACCCAGGTC
TACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGTCCGGTGT
TGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTTCCTTCCG
GTGCTTCTTGCTAAATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTC
GGCTCCCTCGTCTCTGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGC
TAAGAAGGCCTCTACCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGA
GCATCTCCAGCTGCTCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCT
GGCGAGACCCTCGACCTGTCCGATGCTGCTGATGGCTCCACCATCACCTT
CGAGGGCACCACTTCCTTCGGATACAAGGAATGGAAGGGCCCCCTGATCC
GCTTCGGTGGTAAGGATCTGACTGTCACCATGGCCGACGGCGCTGTCATC
GACGGTGACGGTTCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAA
GACCAAGCCCAAGTTCATGTACATCCACGATGTTGAGGACTCGACCTTCA
AGGGCATCAACATCAAGAACACTCCCGTCCAGGCCATCAGTGTCCAGGCT
ACCAACGTCCACCTGAACGACTTCACCATCGACAACTCCGACGGTGATGA
CAACGGTGGCCACAACACCGACGGTTTCGACATCAGCGAGTCTACCGGTG
TCTACATCAGCGGTGCTACCGTCAAGAACCAGGACGACTGCATTGCCATC
AACTCTGGCGAGAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCA
CGGTCTCTCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGA
ACGTGACCATCTCCGACTCCACTGTCAGCAACTCCGCCAACGGTGTCCGC
ATCAAGACCATCTACAAGGAGACCGGTGATGTCAGCGAGATCACCTACTC
TAACATCCAGCTCTCCGGAATCACCGACTACGGTATCGTCATCGAGCAGG
ACTACGAGAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATC
ACTGATGTCACCGTTGACGGTGTCACCGGTACTCTCGAGGATGACGCCAC
CCAGGTCTACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGT
CCGGTGTTGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTT
CCTTCCGGTGCTTCTTGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010865KJC3_010865Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010865-T1KJC3_010865-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010865-T1.utr5p1KJC3_010865-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_010865-T1.utr5p2KJC3_010865-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010865-T1.exon1KJC3_010865-T1.exon1Aspergillus niger KJC3exon
KJC3_010865-T1.exon2KJC3_010865-T1.exon2Aspergillus niger KJC3exon
KJC3_010865-T1.exon3KJC3_010865-T1.exon3Aspergillus niger KJC3exon
KJC3_010865-T1.exon4KJC3_010865-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010865-T1.cdsKJC3_010865-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010865-T1.utr3p1KJC3_010865-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4552033..4553684 +
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