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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4576079..4578046+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010874-T1 ID=KJC3_010874-T1|Name=KJC3_010874-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1968bp|location=Sequence derived from alignment at ch7:4576079..4578046+ (Aspergillus niger KJC3)
ATGTCGGGTCGGAACGCGCCTCGCTCGAAGAATGGTATGCCAACCCTTGC
CCGAGTTCCCCGGAGTTTGGCGGAAAGCTCGGGGAAAAGATTCCAGCTGA
CATGTGTCGACGGGCTGACTGACTGACTGACTGACTCGCTTCTTGCAGGC
TGCAGCACCTGCCGCCGTCGTAAAGTAAAATGCGGGGAGGAGCGTCCAGT
CTGCAAACGCTGCTTCAATCTACGACTGAACTGTGAATGGGGGATTCCCG
TTAAGCGCGGCAAGGCCAATGCCCCGGTTCGGCATCTGCAGCCCGCGCAA
CCTCGCTGGCCGACCAGTGATGGCATCACCACTTGTTCCTCCCCATCCGC
GACCGCTTCCTCACCTGTTCGCGCCGCCGTGACCAACGGCATTCTTCATC
CTCATTATGCCAACACCTTAGCTGCCCTCTGGCATCGGCAGTCCCCCGGA
CCAGCCCCAGATTTCACCCCGGTTTCCCCAGATGTCACTTTCCCCACGGG
ATGGCCGTTTCCGCCCTACGCGCACCCATCGCCCCTCTACCGGCCCCAGC
CCGGAACAGGTGGCCTGCCCTGCACTAATTCGCTTGTCTTGTCGGAGCAT
GATCAGAAATACTTCCAGTACTTCCCCTCCTCGTCCGTCGTGTTCTACTA
CATGAAGAACTGGCAATGGAGCAGCTTCCGCTATCTGTATGAGGGGCCAG
CGGCGACCAGCAAGGTCATCATGCGCATGATTTTGGCTCTGTCGGCAAGT
GATATGCATCGGAATGGCTTGGTTGTCCGGTCACCAGGTCGTCCGACCGC
CGAGGATCATGGCCGGTACCACTACGGCATGGCTGTTAAGGAGTTCCGGC
AATTACTGGAAACCCCCAAACCTCAGGTATCGTTTGCGGAGCTTGAGATG
ATCTTTGCAACGATGTTTCTCATGGTCGCGTACGAATGGCAATTTGGTCA
TTGCGTGCGTCATCTCCACCTCCATCTGCAGGGAGTGCGGTCTTTGCTGG
AGACACATCCGGAATTGTTCCATGTGCGCGATGTCAACGAGGTGTTGTTG
GCAATGGAGGCGGACCAGCCCAGTGATACGGTCTCTCGAGCTTCGTTCAT
CTCGGACCAGTTCTTGCTGTGGATATTGTAAGTATGCCTCCTTTCTCACA
TTAAGCGTCGCTAACAGCTCAGATATATCGACGTCAACCGTCGCTCGATC
GGGACTACAGAGTCACTCTACGACTACGTGCTCAACTCCGGCAATGAATC
TCTTCACCCGGACCATCTGTATCGCTGCGCACGGCTCTGGAGCCGATGCT
TCTGGGGAAAGCAATACCCGGACCAGGAGGTATCGGACGACATGGAGAAC
TACCGGGCGCTGGAGTTTGTACACGTCGGATACACTTTATGGCATAAGCT
CTGGAAATGCTTGGATGAAAAACACGCCGAGTCTGGCGACGCACTGTTCG
CCGAAATGATGACGGTTCGGGATGTATGTCGACATCTTGACACATTAATG
TGAAACCCATGCTAACCATTACAGAAATATTCCGACCTCCTATTAACCGC
CAAGCTCGCCAGTCCAGGCTCCACCCGCCGGACGCTCAACACCATCTACA
TGGCCGTGAACAACTTCTACGCCCTGATTCTATTTCACCGTCGTCTCTTC
GATACAGCCCGCCCACCAGCAGCACTTCACCGCCAAGCCCTCACCAACAT
CATCGACAACGCCCACAAACAACACTCCGCAGACCCGCGTCTATTACGGC
GACTACACTGGCCACTACTAATGGCCATTGTCGAAACCGATGACCCAGTC
CAACGCGAGTGGCTACGCGAGCGGCTCTACGAGCTGCGATCCTTCCACTC
AGAACACCTATGGGCATTTCAACTCGCAGAAGAGGTACTTGCTCGCCAGG
ACGCGAGCGCAGGGGAGTACGCGAATTTGGCGGAATTGCTGCGCAACCAC
CAGATCCGTTTGCAGTAA back to topCoding sequence (CDS) from alignment at ch7:4576079..4578046+ >KJC3_010874-T1 ID=KJC3_010874-T1|Name=KJC3_010874-T1|organism=Aspergillus niger KJC3|type=CDS|length=7032bp|location=Sequence derived from alignment at ch7:4576079..4578046+ (Aspergillus niger KJC3)
ATGTCGGGTCGGAACGCGCCTCGCTCGAAGAATGGCTGCAGCACCTGCCG
CCGTCGTAAAGTAAAATGCGGGGAGGAGCGTCCAGTCTGCAAACGCTGCT
TCAATCTACGACTGAACTGTGAATGGGGGATTCCCGTTAAGCGCGGCAAG
GCCAATGCCCCGGTTCGGCATCTGCAGCCCGCGCAACCTCGCTGGCCGAC
CAGTGATGGCATCACCACTTGTTCCTCCCCATCCGCGACCGCTTCCTCAC
CTGTTCGCGCCGCCGTGACCAACGGCATTCTTCATCCTCATTATGCCAAC
ACCTTAGCTGCCCTCTGGCATCGGCAGTCCCCCGGACCAGCCCCAGATTT
CACCCCGGTTTCCCCAGATGTCACTTTCCCCACGGGATGGCCGTTTCCGC
CCTACGCGCACCCATCGCCCCTCTACCGGCCCCAGCCCGGAACAGGTGGC
CTGCCCTGCACTAATTCGCTTGTCTTGTCGGAGCATGATCAGAAATACTT
CCAGTACTTCCCCTCCTCGTCCGTCGTGTTCTACTACATGAAGAACTGGC
AATGGAGCAGCTTCCGCTATCTGTATGAGGGGCCAGCGGCGACCAGCAAG
GTCATCATGCGCATGATTTTGGCTCTGTCGGCAAGTGATATGCATCGGAA
TGGCTTGGTTGTCCGGTCACCAGGTCGTCCGACCGCCGAGGATCATGGCC
GGTACCACTACGGCATGGCTGTTAAGGAGTTCCGGCAATTACTGGAAACC
CCCAAACCTCAGGTATCGTTTGCGGAGCTTGAGATGATCTTTGCAACGAT
GTTTCTCATGGTCGCGTACGAATGGCAATTTGGTCATTGCGTGCGTCATC
TCCACCTCCATCTGCAGGGAGTGCGGTCTTTGCTGGAGACACATCCGGAA
TTGTTCCATGTGCGCGATGTCAACGAGGTGTTGTTGGCAATGGAGGCGGA
CCAGCCCAGTGATACGGTCTCTCGAGCTTCGTTCATCTCGGACCAGTTCT
TGCTGTGGATATTATATATCGACGTCAACCGTCGCTCGATCGGGACTACA
GAGTCACTCTACGACTACGTGCTCAACTCCGGCAATGAATCTCTTCACCC
GGACCATCTGTATCGCTGCGCACGGCTCTGGAGCCGATGCTTCTGGGGAA
AGCAATACCCGGACCAGGAGGTATCGGACGACATGGAGAACTACCGGGCG
CTGGAGTTTGTACACGTCGGATACACTTTATGGCATAAGCTCTGGAAATG
CTTGGATGAAAAACACGCCGAGTCTGGCGACGCACTGTTCGCCGAAATGA
TGACGGTTCGGGATAAATATTCCGACCTCCTATTAACCGCCAAGCTCGCC
AGTCCAGGCTCCACCCGCCGGACGCTCAACACCATCTACATGGCCGTGAA
CAACTTCTACGCCCTGATTCTATTTCACCGTCGTCTCTTCGATACAGCCC
GCCCACCAGCAGCACTTCACCGCCAAGCCCTCACCAACATCATCGACAAC
GCCCACAAACAACACTCCGCAGACCCGCGTCTATTACGGCGACTACACTG
GCCACTACTAATGGCCATTGTCGAAACCGATGACCCAGTCCAACGCGAGT
GGCTACGCGAGCGGCTCTACGAGCTGCGATCCTTCCACTCAGAACACCTA
TGGGCATTTCAACTCGCAGAAGAGGTACTTGCTCGCCAGGACGCGAGCGC
AGGGGAGTACGCGAATTTGGCGGAATTGCTGCGCAACCACCAGATCCGTT
TGCAGTAAATGTCGGGTCGGAACGCGCCTCGCTCGAAGAATGGCTGCAGC
ACCTGCCGCCGTCGTAAAGTAAAATGCGGGGAGGAGCGTCCAGTCTGCAA
ACGCTGCTTCAATCTACGACTGAACTGTGAATGGGGGATTCCCGTTAAGC
GCGGCAAGGCCAATGCCCCGGTTCGGCATCTGCAGCCCGCGCAACCTCGC
TGGCCGACCAGTGATGGCATCACCACTTGTTCCTCCCCATCCGCGACCGC
TTCCTCACCTGTTCGCGCCGCCGTGACCAACGGCATTCTTCATCCTCATT
ATGCCAACACCTTAGCTGCCCTCTGGCATCGGCAGTCCCCCGGACCAGCC
CCAGATTTCACCCCGGTTTCCCCAGATGTCACTTTCCCCACGGGATGGCC
GTTTCCGCCCTACGCGCACCCATCGCCCCTCTACCGGCCCCAGCCCGGAA
CAGGTGGCCTGCCCTGCACTAATTCGCTTGTCTTGTCGGAGCATGATCAG
AAATACTTCCAGTACTTCCCCTCCTCGTCCGTCGTGTTCTACTACATGAA
GAACTGGCAATGGAGCAGCTTCCGCTATCTGTATGAGGGGCCAGCGGCGA
CCAGCAAGGTCATCATGCGCATGATTTTGGCTCTGTCGGCAAGTGATATG
CATCGGAATGGCTTGGTTGTCCGGTCACCAGGTCGTCCGACCGCCGAGGA
TCATGGCCGGTACCACTACGGCATGGCTGTTAAGGAGTTCCGGCAATTAC
TGGAAACCCCCAAACCTCAGGTATCGTTTGCGGAGCTTGAGATGATCTTT
GCAACGATGTTTCTCATGGTCGCGTACGAATGGCAATTTGGTCATTGCGT
GCGTCATCTCCACCTCCATCTGCAGGGAGTGCGGTCTTTGCTGGAGACAC
ATCCGGAATTGTTCCATGTGCGCGATGTCAACGAGGTGTTGTTGGCAATG
GAGGCGGACCAGCCCAGTGATACGGTCTCTCGAGCTTCGTTCATCTCGGA
CCAGTTCTTGCTGTGGATATTATATATCGACGTCAACCGTCGCTCGATCG
GGACTACAGAGTCACTCTACGACTACGTGCTCAACTCCGGCAATGAATCT
CTTCACCCGGACCATCTGTATCGCTGCGCACGGCTCTGGAGCCGATGCTT
CTGGGGAAAGCAATACCCGGACCAGGAGGTATCGGACGACATGGAGAACT
ACCGGGCGCTGGAGTTTGTACACGTCGGATACACTTTATGGCATAAGCTC
TGGAAATGCTTGGATGAAAAACACGCCGAGTCTGGCGACGCACTGTTCGC
CGAAATGATGACGGTTCGGGATAAATATTCCGACCTCCTATTAACCGCCA
AGCTCGCCAGTCCAGGCTCCACCCGCCGGACGCTCAACACCATCTACATG
GCCGTGAACAACTTCTACGCCCTGATTCTATTTCACCGTCGTCTCTTCGA
TACAGCCCGCCCACCAGCAGCACTTCACCGCCAAGCCCTCACCAACATCA
TCGACAACGCCCACAAACAACACTCCGCAGACCCGCGTCTATTACGGCGA
CTACACTGGCCACTACTAATGGCCATTGTCGAAACCGATGACCCAGTCCA
ACGCGAGTGGCTACGCGAGCGGCTCTACGAGCTGCGATCCTTCCACTCAG
AACACCTATGGGCATTTCAACTCGCAGAAGAGGTACTTGCTCGCCAGGAC
GCGAGCGCAGGGGAGTACGCGAATTTGGCGGAATTGCTGCGCAACCACCA
GATCCGTTTGCAGTAAATGTCGGGTCGGAACGCGCCTCGCTCGAAGAATG
GCTGCAGCACCTGCCGCCGTCGTAAAGTAAAATGCGGGGAGGAGCGTCCA
GTCTGCAAACGCTGCTTCAATCTACGACTGAACTGTGAATGGGGGATTCC
CGTTAAGCGCGGCAAGGCCAATGCCCCGGTTCGGCATCTGCAGCCCGCGC
AACCTCGCTGGCCGACCAGTGATGGCATCACCACTTGTTCCTCCCCATCC
GCGACCGCTTCCTCACCTGTTCGCGCCGCCGTGACCAACGGCATTCTTCA
TCCTCATTATGCCAACACCTTAGCTGCCCTCTGGCATCGGCAGTCCCCCG
GACCAGCCCCAGATTTCACCCCGGTTTCCCCAGATGTCACTTTCCCCACG
GGATGGCCGTTTCCGCCCTACGCGCACCCATCGCCCCTCTACCGGCCCCA
GCCCGGAACAGGTGGCCTGCCCTGCACTAATTCGCTTGTCTTGTCGGAGC
ATGATCAGAAATACTTCCAGTACTTCCCCTCCTCGTCCGTCGTGTTCTAC
TACATGAAGAACTGGCAATGGAGCAGCTTCCGCTATCTGTATGAGGGGCC
AGCGGCGACCAGCAAGGTCATCATGCGCATGATTTTGGCTCTGTCGGCAA
GTGATATGCATCGGAATGGCTTGGTTGTCCGGTCACCAGGTCGTCCGACC
GCCGAGGATCATGGCCGGTACCACTACGGCATGGCTGTTAAGGAGTTCCG
GCAATTACTGGAAACCCCCAAACCTCAGGTATCGTTTGCGGAGCTTGAGA
TGATCTTTGCAACGATGTTTCTCATGGTCGCGTACGAATGGCAATTTGGT
CATTGCGTGCGTCATCTCCACCTCCATCTGCAGGGAGTGCGGTCTTTGCT
GGAGACACATCCGGAATTGTTCCATGTGCGCGATGTCAACGAGGTGTTGT
TGGCAATGGAGGCGGACCAGCCCAGTGATACGGTCTCTCGAGCTTCGTTC
ATCTCGGACCAGTTCTTGCTGTGGATATTATATATCGACGTCAACCGTCG
CTCGATCGGGACTACAGAGTCACTCTACGACTACGTGCTCAACTCCGGCA
ATGAATCTCTTCACCCGGACCATCTGTATCGCTGCGCACGGCTCTGGAGC
CGATGCTTCTGGGGAAAGCAATACCCGGACCAGGAGGTATCGGACGACAT
GGAGAACTACCGGGCGCTGGAGTTTGTACACGTCGGATACACTTTATGGC
ATAAGCTCTGGAAATGCTTGGATGAAAAACACGCCGAGTCTGGCGACGCA
CTGTTCGCCGAAATGATGACGGTTCGGGATAAATATTCCGACCTCCTATT
AACCGCCAAGCTCGCCAGTCCAGGCTCCACCCGCCGGACGCTCAACACCA
TCTACATGGCCGTGAACAACTTCTACGCCCTGATTCTATTTCACCGTCGT
CTCTTCGATACAGCCCGCCCACCAGCAGCACTTCACCGCCAAGCCCTCAC
CAACATCATCGACAACGCCCACAAACAACACTCCGCAGACCCGCGTCTAT
TACGGCGACTACACTGGCCACTACTAATGGCCATTGTCGAAACCGATGAC
CCAGTCCAACGCGAGTGGCTACGCGAGCGGCTCTACGAGCTGCGATCCTT
CCACTCAGAACACCTATGGGCATTTCAACTCGCAGAAGAGGTACTTGCTC
GCCAGGACGCGAGCGCAGGGGAGTACGCGAATTTGGCGGAATTGCTGCGC
AACCACCAGATCCGTTTGCAGTAAATGTCGGGTCGGAACGCGCCTCGCTC
GAAGAATGGCTGCAGCACCTGCCGCCGTCGTAAAGTAAAATGCGGGGAGG
AGCGTCCAGTCTGCAAACGCTGCTTCAATCTACGACTGAACTGTGAATGG
GGGATTCCCGTTAAGCGCGGCAAGGCCAATGCCCCGGTTCGGCATCTGCA
GCCCGCGCAACCTCGCTGGCCGACCAGTGATGGCATCACCACTTGTTCCT
CCCCATCCGCGACCGCTTCCTCACCTGTTCGCGCCGCCGTGACCAACGGC
ATTCTTCATCCTCATTATGCCAACACCTTAGCTGCCCTCTGGCATCGGCA
GTCCCCCGGACCAGCCCCAGATTTCACCCCGGTTTCCCCAGATGTCACTT
TCCCCACGGGATGGCCGTTTCCGCCCTACGCGCACCCATCGCCCCTCTAC
CGGCCCCAGCCCGGAACAGGTGGCCTGCCCTGCACTAATTCGCTTGTCTT
GTCGGAGCATGATCAGAAATACTTCCAGTACTTCCCCTCCTCGTCCGTCG
TGTTCTACTACATGAAGAACTGGCAATGGAGCAGCTTCCGCTATCTGTAT
GAGGGGCCAGCGGCGACCAGCAAGGTCATCATGCGCATGATTTTGGCTCT
GTCGGCAAGTGATATGCATCGGAATGGCTTGGTTGTCCGGTCACCAGGTC
GTCCGACCGCCGAGGATCATGGCCGGTACCACTACGGCATGGCTGTTAAG
GAGTTCCGGCAATTACTGGAAACCCCCAAACCTCAGGTATCGTTTGCGGA
GCTTGAGATGATCTTTGCAACGATGTTTCTCATGGTCGCGTACGAATGGC
AATTTGGTCATTGCGTGCGTCATCTCCACCTCCATCTGCAGGGAGTGCGG
TCTTTGCTGGAGACACATCCGGAATTGTTCCATGTGCGCGATGTCAACGA
GGTGTTGTTGGCAATGGAGGCGGACCAGCCCAGTGATACGGTCTCTCGAG
CTTCGTTCATCTCGGACCAGTTCTTGCTGTGGATATTATATATCGACGTC
AACCGTCGCTCGATCGGGACTACAGAGTCACTCTACGACTACGTGCTCAA
CTCCGGCAATGAATCTCTTCACCCGGACCATCTGTATCGCTGCGCACGGC
TCTGGAGCCGATGCTTCTGGGGAAAGCAATACCCGGACCAGGAGGTATCG
GACGACATGGAGAACTACCGGGCGCTGGAGTTTGTACACGTCGGATACAC
TTTATGGCATAAGCTCTGGAAATGCTTGGATGAAAAACACGCCGAGTCTG
GCGACGCACTGTTCGCCGAAATGATGACGGTTCGGGATAAATATTCCGAC
CTCCTATTAACCGCCAAGCTCGCCAGTCCAGGCTCCACCCGCCGGACGCT
CAACACCATCTACATGGCCGTGAACAACTTCTACGCCCTGATTCTATTTC
ACCGTCGTCTCTTCGATACAGCCCGCCCACCAGCAGCACTTCACCGCCAA
GCCCTCACCAACATCATCGACAACGCCCACAAACAACACTCCGCAGACCC
GCGTCTATTACGGCGACTACACTGGCCACTACTAATGGCCATTGTCGAAA
CCGATGACCCAGTCCAACGCGAGTGGCTACGCGAGCGGCTCTACGAGCTG
CGATCCTTCCACTCAGAACACCTATGGGCATTTCAACTCGCAGAAGAGGT
ACTTGCTCGCCAGGACGCGAGCGCAGGGGAGTACGCGAATTTGGCGGAAT
TGCTGCGCAACCACCAGATCCGTTTGCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4576079..4578046 + |
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