You are here

Home

KJC3_010911-T1, KJC3_010911-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010911-T1
Unique NameKJC3_010911-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4662713..4665704-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010911-T1 ID=KJC3_010911-T1|Name=KJC3_010911-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2992bp|location=Sequence derived from alignment at ch7:4662713..4665704- (Aspergillus niger KJC3)
CTAATATGGATCAAGCACACAGGAACTAAATATTCGCGAGCCGACGAGGG
TCTGGAGTCTATTTTGCACGCTAAAACGGCACCGCCATAGCAGCCTAATC
GAAGGCATTCGTCATCTACGTCGACACGTAAGTACGCCATTTTCGAGAAT
GGTGGGCTCATCCAAAATAATAAATCTTTCAAATAGGGGTTCGCAGTGTT
GAATAGCCTTCTTTGCTGAGAAATCAGCCTTGTCTGCTACACAATGAGTA
GCCGTGCTTCATCTCCGTCGAAGCTTTGAACATCGGTACACTGTAGAGGG
TTTAGACGTGGGTTGGCAGTCAAGGCAGGTCTTATGCCCAATTGCGGTGC
CTTTTTTCGTGCTGCAAGCAGACAATTAATGCTCGAGACAGCCGTGGGTA
TGTTCTGGCGACAGGCTTGCCCGGGTCTGTCGGCTACGGAGCATACGTAT
GCCCCGGACAACCCTGATTTTTCCAAAGGTCACTCAGACCCTTAGAATGT
CCACCAAGTCGAACAAGGGTCCGTATCAGTGCATTATGGGACTTTACACG
GTGCCTCGGTCCAAGTACAGGTTCAATTCTGGCACCTCTTCCCCGCCGAG
CAATTGGAACATCACAAGGCAAATTAGCCGACTCCGAACGGAGTACACAT
ACTCAAGAAACGATACACACGTTATCACTTCACACTCAATAGACATGCCG
TCTATCCCGCTTCAGATATTTTTGCTATGGCACAAACCCCGCGCAGCCTT
GTCGGCCAGCCGCTCATTCGTGGCTACGCGCTAACTTATGGCCGCATTGC
GTAAGCGCTCCACCGAGTATATGTGGCATCGATATCAACATATCAACATC
TTTTCTACCGTTTGAACATGCATGGGCTGTTATGCTTAATAGCCATTTTA
TCTGCCGGGACTAGTCGTGCACGAGTCAGAACTCGAAACCTGGTAAAAAG
ACGCAACGCACCCATCTTAGCCTGCAGATCCCATCCAACTACAGCGATTT
CCCTCACTATACTAGTTTCCCTTGCTATTCTTGGCGAGCCCTACGGCTGC
CGGCCATAACGGTTGGTTTATCTATTCTGAGCCGAATAAGCGCTTACGTA
TGTCTTCATTTTTTCGACATGACCCCTTCGGGTTGATCAAGTCATTGTAA
CAGCCGGGCGCCGTGGGGGACCGGTCAACAAACCAATGGAAAAGCTTTGG
TATGAATCCTGATGCTTTTACTTATGCACTAGCTGACTTTTTCTGTCTTA
AGGGGCTCCATGATACCCTGGCGATCTAAGCCTATTGTATAGCTTGCCAG
CTCATTACTTGAATAAGATGGAGTGCGGACCCAGAAGGGTCTTTACTTTT
CCAAAATTGTTTTCATGCGACGTGCGTATGCCACGACATGTCTTACAGAA
ATCTATCAAGTATAGATGTCTCCGATAGGGCGAACCTCCCCGATTACGAG
TTACACAATGTCCCTGTCGCACCGCCGTATACAGCCACTGCATCGGCTCC
CGTAGCTGCAGGAGCAGGAGCAGGAGCAGCAGAAGCAGCACAGAAAGCCG
GTGTTGCAAAGGGCGCCGGAGGACCGTGGTATGACCCGCGCTCATGGTCA
CTGTTAACGAAGTTGCTCGTCGCCGGAGGTGTTGTGGTTGTCATCGTTGC
GCTTGTTGTGGGAATCTACGAGGGCACGAAATCATCTTCATATCCGGACT
ACACTGCACTGAGCTATAAGCTCGCAGATACATACTCGGGCTCTTCATTC
TTTGACGAGTTCGAATACTACACAGCCGCCGATACGACAGACGGATTCGT
AGAGTATGTGCATCACTTCCACACACACCTCCCTCCATATACACAAAGCA
AAGAACTCAACTAACCCTATCCCAGCTACGTCGACAGCTCCACCGCCTCA
GAAATGAACCTAACCTACGCATCCAGCTCCCGCGCCGTCCTGCGCGTGGA
CACCGACACCTCAAACCAAACCAGCGGCCGCAAATCCGTGCGCATCACCT
CCAAGAAAACCTACAACGATGGGCTCTTCATCTTCGACATCACCCACACG
CCCTACGGCTGCGCCACCTGGCCCGCCCTCTGGCTCACAGACCCTAGTAA
CTGGCCCGAACACGGCGAAATCGACGTCCTGGAGTCCAACAATAAAGCCA
CCCACGGCAACGCCATGACATTACACACCTCAAGCGGATGCAAAATGAAC
GTGAAGCGCAAAGAAACCGGCACAGCCAAATACACCAACTGCCTCAACAC
CGCAAACGACAACGCCGGCTGCAGCGTAACAGGTGCAAAGGCAACATATG
GCGAGAAATTCAACAGCAATGGTGGCGGCGTAAGCAATCCCCAATCCCCC
CATTCCCCATTCCCCCATTCCATCCCCAACAACCCCCATATCTAATATAT
CCACCAGGTCTACGCCATGGAACTCCGCCCCGCCGGCATCCGCGTATGGA
TGTTCACCCGCGACTCCATCCCCAGCGACATCTCCAACTCGAGCAGCACG
CCCGACCCATCGACCTGGGGCGAAGCACTCGCCGACTTCCCCAACACGAA
CTGCGACATCTCGTCGCATTTCAAGAACCAGAGTATTATCGTTAACATCG
ATATCTGTGGTGATCTTGCGGGCGCGAGCACCTACTACACCGATCTGTAT
GATTGTCCGTCGACGTGCACGAAATGGGCCGCGGAGAATGGGGCCAACTT
CACGAATGCGTATTGGGAGTTTAAGAGCTTTAAGGTTTATCAGACGAGTT
CGAGTAGTAATAGTTCTTCGTCGGCGAGTGCGACGGCGTCGTCGTCTACG
GCGGTGGGGTATGGGGCTTCGGCTGCTTCTACTACGACGACGACGGCGGC
GGATGGGGCGGGGAGTACGACGGGTCAGGGAGGGGGGAGTCAGAGTGGGC
AACAGGGACAGAGTGGGCAGCAGGAGGGACAGCAGGGGGGAAGTAGTAGT
AGTAGTCAAGAGAAAGAGCAGGGTGGGCAGGGTGGGTATTGA
back to top

Coding sequence (CDS) from alignment at ch7:4662713..4665704-

>KJC3_010911-T1 ID=KJC3_010911-T1|Name=KJC3_010911-T1|organism=Aspergillus niger KJC3|type=CDS|length=4365bp|location=Sequence derived from alignment at ch7:4662713..4665704- (Aspergillus niger KJC3)
GTCTACGCCATGGAACTCCGCCCCGCCGGCATCCGCGTATGGATGTTCAC
CCGCGACTCCATCCCCAGCGACATCTCCAACTCGAGCAGCACGCCCGACC
CATCGACCTGGGGCGAAGCACTCGCCGACTTCCCCAACACGAACTGCGAC
ATCTCGTCGCATTTCAAGAACCAGAGTATTATCGTTAACATCGATATCTG
TGGTGATCTTGCGGGCGCGAGCACCTACTACACCGATCTGTATGATTGTC
CGTCGACGTGCACGAAATGGGCCGCGGAGAATGGGGCCAACTTCACGAAT
GCGTATTGGGAGTTTAAGAGCTTTAAGGTTTATCAGACGAGTTCGAGTAG
TAATAGTTCTTCGTCGGCGAGTGCGACGGCGTCGTCGTCTACGGCGGTGG
GGTATGGGGCTTCGGCTGCTTCTACTACGACGACGACGGCGGCGGATGGG
GCGGGGAGTACGACGGGTCAGGGAGGGGGGAGTCAGAGTGGGCAACAGGG
ACAGAGTGGGCAGCAGGAGGGACAGCAGGGGGGAAGTAGTAGTAGTAGTC
AAGAGAAAGAGCAGGGTGGGCAGGGTGGGTATTGACTACGTCGACAGCTC
CACCGCCTCAGAAATGAACCTAACCTACGCATCCAGCTCCCGCGCCGTCC
TGCGCGTGGACACCGACACCTCAAACCAAACCAGCGGCCGCAAATCCGTG
CGCATCACCTCCAAGAAAACCTACAACGATGGGCTCTTCATCTTCGACAT
CACCCACACGCCCTACGGCTGCGCCACCTGGCCCGCCCTCTGGCTCACAG
ACCCTAGTAACTGGCCCGAACACGGCGAAATCGACGTCCTGGAGTCCAAC
AATAAAGCCACCCACGGCAACGCCATGACATTACACACCTCAAGCGGATG
CAAAATGAACGTGAAGCGCAAAGAAACCGGCACAGCCAAATACACCAACT
GCCTCAACACCGCAAACGACAACGCCGGCTGCAGCGTAACAGGTGCAAAG
GCAACATATGGCGAGAAATTCAACAGCAATGGTGGCGGCATGTCTTACAG
AAATCTATCAAGTATAGATGTCTCCGATAGGGCGAACCTCCCCGATTACG
AGTTACACAATGTCCCTGTCGCACCGCCGTATACAGCCACTGCATCGGCT
CCCGTAGCTGCAGGAGCAGGAGCAGGAGCAGCAGAAGCAGCACAGAAAGC
CGGTGTTGCAAAGGGCGCCGGAGGACCGTGGTATGACCCGCGCTCATGGT
CACTGTTAACGAAGTTGCTCGTCGCCGGAGGTGTTGTGGTTGTCATCGTT
GCGCTTGTTGTGGGAATCTACGAGGGCACGAAATCATCTTCATATCCGGA
CTACACTGCACTGAGCTATAAGCTCGCAGATACATACTCGGGCTCTTCAT
TCTTTGACGAGTTCGAATACTACACAGCCGCCGATACGACAGACGGATTC
GTAGAGTCTACGCCATGGAACTCCGCCCCGCCGGCATCCGCGTATGGATG
TTCACCCGCGACTCCATCCCCAGCGACATCTCCAACTCGAGCAGCACGCC
CGACCCATCGACCTGGGGCGAAGCACTCGCCGACTTCCCCAACACGAACT
GCGACATCTCGTCGCATTTCAAGAACCAGAGTATTATCGTTAACATCGAT
ATCTGTGGTGATCTTGCGGGCGCGAGCACCTACTACACCGATCTGTATGA
TTGTCCGTCGACGTGCACGAAATGGGCCGCGGAGAATGGGGCCAACTTCA
CGAATGCGTATTGGGAGTTTAAGAGCTTTAAGGTTTATCAGACGAGTTCG
AGTAGTAATAGTTCTTCGTCGGCGAGTGCGACGGCGTCGTCGTCTACGGC
GGTGGGGTATGGGGCTTCGGCTGCTTCTACTACGACGACGACGGCGGCGG
ATGGGGCGGGGAGTACGACGGGTCAGGGAGGGGGGAGTCAGAGTGGGCAA
CAGGGACAGAGTGGGCAGCAGGAGGGACAGCAGGGGGGAAGTAGTAGTAG
TAGTCAAGAGAAAGAGCAGGGTGGGCAGGGTGGGTATTGACTACGTCGAC
AGCTCCACCGCCTCAGAAATGAACCTAACCTACGCATCCAGCTCCCGCGC
CGTCCTGCGCGTGGACACCGACACCTCAAACCAAACCAGCGGCCGCAAAT
CCGTGCGCATCACCTCCAAGAAAACCTACAACGATGGGCTCTTCATCTTC
GACATCACCCACACGCCCTACGGCTGCGCCACCTGGCCCGCCCTCTGGCT
CACAGACCCTAGTAACTGGCCCGAACACGGCGAAATCGACGTCCTGGAGT
CCAACAATAAAGCCACCCACGGCAACGCCATGACATTACACACCTCAAGC
GGATGCAAAATGAACGTGAAGCGCAAAGAAACCGGCACAGCCAAATACAC
CAACTGCCTCAACACCGCAAACGACAACGCCGGCTGCAGCGTAACAGGTG
CAAAGGCAACATATGGCGAGAAATTCAACAGCAATGGTGGCGGCATGTCT
TACAGAAATCTATCAAGTATAGATGTCTCCGATAGGGCGAACCTCCCCGA
TTACGAGTTACACAATGTCCCTGTCGCACCGCCGTATACAGCCACTGCAT
CGGCTCCCGTAGCTGCAGGAGCAGGAGCAGGAGCAGCAGAAGCAGCACAG
AAAGCCGGTGTTGCAAAGGGCGCCGGAGGACCGTGGTATGACCCGCGCTC
ATGGTCACTGTTAACGAAGTTGCTCGTCGCCGGAGGTGTTGTGGTTGTCA
TCGTTGCGCTTGTTGTGGGAATCTACGAGGGCACGAAATCATCTTCATAT
CCGGACTACACTGCACTGAGCTATAAGCTCGCAGATACATACTCGGGCTC
TTCATTCTTTGACGAGTTCGAATACTACACAGCCGCCGATACGACAGACG
GATTCGTAGAGTCTACGCCATGGAACTCCGCCCCGCCGGCATCCGCGTAT
GGATGTTCACCCGCGACTCCATCCCCAGCGACATCTCCAACTCGAGCAGC
ACGCCCGACCCATCGACCTGGGGCGAAGCACTCGCCGACTTCCCCAACAC
GAACTGCGACATCTCGTCGCATTTCAAGAACCAGAGTATTATCGTTAACA
TCGATATCTGTGGTGATCTTGCGGGCGCGAGCACCTACTACACCGATCTG
TATGATTGTCCGTCGACGTGCACGAAATGGGCCGCGGAGAATGGGGCCAA
CTTCACGAATGCGTATTGGGAGTTTAAGAGCTTTAAGGTTTATCAGACGA
GTTCGAGTAGTAATAGTTCTTCGTCGGCGAGTGCGACGGCGTCGTCGTCT
ACGGCGGTGGGGTATGGGGCTTCGGCTGCTTCTACTACGACGACGACGGC
GGCGGATGGGGCGGGGAGTACGACGGGTCAGGGAGGGGGGAGTCAGAGTG
GGCAACAGGGACAGAGTGGGCAGCAGGAGGGACAGCAGGGGGGAAGTAGT
AGTAGTAGTCAAGAGAAAGAGCAGGGTGGGCAGGGTGGGTATTGACTACG
TCGACAGCTCCACCGCCTCAGAAATGAACCTAACCTACGCATCCAGCTCC
CGCGCCGTCCTGCGCGTGGACACCGACACCTCAAACCAAACCAGCGGCCG
CAAATCCGTGCGCATCACCTCCAAGAAAACCTACAACGATGGGCTCTTCA
TCTTCGACATCACCCACACGCCCTACGGCTGCGCCACCTGGCCCGCCCTC
TGGCTCACAGACCCTAGTAACTGGCCCGAACACGGCGAAATCGACGTCCT
GGAGTCCAACAATAAAGCCACCCACGGCAACGCCATGACATTACACACCT
CAAGCGGATGCAAAATGAACGTGAAGCGCAAAGAAACCGGCACAGCCAAA
TACACCAACTGCCTCAACACCGCAAACGACAACGCCGGCTGCAGCGTAAC
AGGTGCAAAGGCAACATATGGCGAGAAATTCAACAGCAATGGTGGCGGCA
TGTCTTACAGAAATCTATCAAGTATAGATGTCTCCGATAGGGCGAACCTC
CCCGATTACGAGTTACACAATGTCCCTGTCGCACCGCCGTATACAGCCAC
TGCATCGGCTCCCGTAGCTGCAGGAGCAGGAGCAGGAGCAGCAGAAGCAG
CACAGAAAGCCGGTGTTGCAAAGGGCGCCGGAGGACCGTGGTATGACCCG
CGCTCATGGTCACTGTTAACGAAGTTGCTCGTCGCCGGAGGTGTTGTGGT
TGTCATCGTTGCGCTTGTTGTGGGAATCTACGAGGGCACGAAATCATCTT
CATATCCGGACTACACTGCACTGAGCTATAAGCTCGCAGATACATACTCG
GGCTCTTCATTCTTTGACGAGTTCGAATACTACACAGCCGCCGATACGAC
AGACGGATTCGTAGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010911KJC3_010911Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010911-T1KJC3_010911-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010911-T1.cdsKJC3_010911-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010911-T1.exon5KJC3_010911-T1.exon5Aspergillus niger KJC3exon
KJC3_010911-T1.exon4KJC3_010911-T1.exon4Aspergillus niger KJC3exon
KJC3_010911-T1.exon3KJC3_010911-T1.exon3Aspergillus niger KJC3exon
KJC3_010911-T1.exon2KJC3_010911-T1.exon2Aspergillus niger KJC3exon
KJC3_010911-T1.exon1KJC3_010911-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010911-T1.utr5p3KJC3_010911-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_010911-T1.utr5p2KJC3_010911-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_010911-T1.utr5p1KJC3_010911-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR000757
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4662713..4665704 -
Powered by Drupal