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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4675701..4678114- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010916-T1 ID=KJC3_010916-T1|Name=KJC3_010916-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2414bp|location=Sequence derived from alignment at ch7:4675701..4678114- (Aspergillus niger KJC3)
ATGGACACTCAAGATGTTTCTCAAGCACCGGAATACCTGCAATACCTACA
GAAACAGAAGCGAGTTCTCCAAAATGCGCAACTCCACAAGGGCAAGACTC
TCAAGCCCACCAAGTCTCGCGACGAAATCATAATGGAGTTCATGTTTCGT
CAGATGATGTCTAGTAATAAACTTGCCAACAAGCATCAGATTCGCTCGTC
GTTTGTGCCTCCAGCCTACCCGCCCTCTGTTGCTGCTTTGAGTACCCTGA
AACGAGTATTCATCAGAGATCTTACTCTTGAAACTCATCATCGTGGATTC
TACATTCTGCTTAAAGCAGTCACGCCGACAGATAGAATGACTGCGGTGAT
GGCCGTAGTAGAAGATGAAAGAGGGGATGTTCTCATGTTACAATTATACA
ATCAGGAGGAAGAGCTCTCGACCGATGGCCGTCTCGTCGAAGGGACAGTG
ATACTTGTGAAGGAACCTTACTTGAAGATCATGGCTGATGAAAATTACGG
AATCCGAGTCGACCATCTCTCTGACCTTAGATTTCTCCCAAGCCATGACC
CTTTAGTACCCGTGTCATGGGGAGGTCGACGCGGAATGGATCAAACGGCC
AGCTATTGCAAAACAAAAGCCAACGACCATTTCAACAAGGGTCAGTACTA
TCTTGCTATTGATTGGTAAGTATCCACGGAAGAAGAATGCAGAGAGGAAA
GCTGATCAAAATGTAGGTACTCCAAGGCTCTGGATACCTCCCCAACAACC
GATGAAGCCCTCATAATCAGGCTCAACCGCGCTCTTACTTATCTCAAGAC
TCATCAATTTGACGCGGCGCTTTATGACCTCAAAACTGTCTTGTCAGACC
AGGAATCTTCCGAAAAAGCCCTCTTTCGCAAATCTCAGGCTCTTTACCAT
CTCGCCAGATTTGAAGAATCCTGCAAAGTCCACCAAGTGCTCTTTGCCAC
GTTTCCGAATAACACCGCCGCTAAACTCGAGTTTAATCGCGCCACTGCAC
GGCTTGCAGAAGAGCGGACTGGGAAATACCCTTTCAAGAACCTGCAACGA
GAGGCGAAGAAACGTTGCCCGCCGCTCCTTGATCGCGGATCATATATCGG
ACCCGTGTCTGTCAGGCCAACGGAGTCTCGCGGTCGAGGCTTATTCACGA
CAGAGGCTGTTCGAGCCGGTGATCTATTATTTTGCGAGAAAGCCTTTGCG
CATGCATTTCATGACGAAGTCGCCGGTGCTTCGGGCAGCGTCTCGATCTT
GATGAACCCGGAAACAAACACCATCACAGTGGGTACTCAGGCGGACCTTA
TCGCTTTAATCGCACAGAAACTATACAAAAACCCGTCGCTTAGGTCGAAG
TTCACTGACCTTTATCACGGTTCGTACCATCCTGTTGAGGTTGCGGAAGT
TGACGGTACACCTGTCGTAGACACGTGAGTTCTAAACACTGGATTCATTT
TACCTTAACGGAAGAGCTAACACCTTTAGCTTTCTCATTGAGCGTATAAT
GTCACTCAACTGCTTCGGTTGCCCCCTCTCCTCCCGCGAATCCCACCTAT
GCACCATGAAAGACGCCGGATCACAGTCAGAACCCGCTGAGAACAAGAAG
TTCCACTCCTGCGGTGTCTGGCCTCTAGCATCCTACATCAACCATTCCTG
CTACAGCAATGTTCGCCGCTCATTCATTGGTGATATGTTGATCGTCCGTG
CTACTCAGGACCTCCCTGCGAATACCGAGCTGTTTTTCTGGTACCAACAA
CCCTCGGACAGCACTTCCAAGGCAAAACAACTCAACCTGAAACACTGGGG
CTTCAAGTGCAACTGCGTGATCTGTCAAGATTCCACTGAGACAGAGGAGA
GTGATCTGATGAAGCGAAGGAGGCTCACAGCGGACTTGGTGAATGCTTTT
CGGGCCCTGAGCAAGCCCCGCAAGCCGAAGTCAGCTATGGCTCGAATTGA
GGAACTTATTTCTAAACTTGAGGAGACGTATCGCAAGCCAGCCGTTCAAG
TCCCACGTCTCGGTATCTGGAAGGCGTATTTGGGCATAGCGGAGGCCCAC
GCCGCACAGGGCGTCTTAGCGAAGACTGTTGAGTTTGCACTGAAGACTTT
AGAGTCACTTGGGTATGTGCTTGAAGGCGGAGGAGTCCCGTATACTTCTG
GTGCACCGCTACACGTTATGAAATGGGGTCTGATGATGGATGGACTTGTT
AGATGTTGGATGATTCTTTGCAGAGCGTATTGCGATTTAGCTCCTGAACT
AGCAAGTCAAGCAGAGGACTATGCTAGGATCACCTATAGGATATGCGTTG
GTGAGGATGAGACTTTTGCGGATACGTACAGTCGATTCTCAAAGGGGACA
GATGGGCTTCTTGATGGGGTGAAATAGAAGTAGGAAAGTATATAGAACCG
ACTATTAGCATGGG back to topCoding sequence (CDS) from alignment at ch7:4675701..4678114- >KJC3_010916-T1 ID=KJC3_010916-T1|Name=KJC3_010916-T1|organism=Aspergillus niger KJC3|type=CDS|length=6813bp|location=Sequence derived from alignment at ch7:4675701..4678114- (Aspergillus niger KJC3)
CTTTCTCATTGAGCGTATAATGTCACTCAACTGCTTCGGTTGCCCCCTCT
CCTCCCGCGAATCCCACCTATGCACCATGAAAGACGCCGGATCACAGTCA
GAACCCGCTGAGAACAAGAAGTTCCACTCCTGCGGTGTCTGGCCTCTAGC
ATCCTACATCAACCATTCCTGCTACAGCAATGTTCGCCGCTCATTCATTG
GTGATATGTTGATCGTCCGTGCTACTCAGGACCTCCCTGCGAATACCGAG
CTGTTTTTCTGGTACCAACAACCCTCGGACAGCACTTCCAAGGCAAAACA
ACTCAACCTGAAACACTGGGGCTTCAAGTGCAACTGCGTGATCTGTCAAG
ATTCCACTGAGACAGAGGAGAGTGATCTGATGAAGCGAAGGAGGCTCACA
GCGGACTTGGTGAATGCTTTTCGGGCCCTGAGCAAGCCCCGCAAGCCGAA
GTCAGCTATGGCTCGAATTGAGGAACTTATTTCTAAACTTGAGGAGACGT
ATCGCAAGCCAGCCGTTCAAGTCCCACGTCTCGGTATCTGGAAGGCGTAT
TTGGGCATAGCGGAGGCCCACGCCGCACAGGGCGTCTTAGCGAAGACTGT
TGAGTTTGCACTGAAGACTTTAGAGTCACTTGGGTATGTGCTTGAAGGCG
GAGGAGTCCCGTATACTTCTGGTGCACCGCTACACGTTATGAAATGGGGT
CTGATGATGGATGGACTTGTTAGATGTTGGATGATTCTTTGCAGAGCGTA
TTGCGATTTAGCTCCTGAACTAGCAAGTCAAGCAGAGGACTATGCTAGGA
TCACCTATAGGATATGCGTTGGTGAGGATGAGACTTTTGCGGATACGTAC
AGTCGATTCTCAAAGGGGACAGATGGGCTTCTTGATGGGGTGAAATAGGT
ACTCCAAGGCTCTGGATACCTCCCCAACAACCGATGAAGCCCTCATAATC
AGGCTCAACCGCGCTCTTACTTATCTCAAGACTCATCAATTTGACGCGGC
GCTTTATGACCTCAAAACTGTCTTGTCAGACCAGGAATCTTCCGAAAAAG
CCCTCTTTCGCAAATCTCAGGCTCTTTACCATCTCGCCAGATTTGAAGAA
TCCTGCAAAGTCCACCAAGTGCTCTTTGCCACGTTTCCGAATAACACCGC
CGCTAAACTCGAGTTTAATCGCGCCACTGCACGGCTTGCAGAAGAGCGGA
CTGGGAAATACCCTTTCAAGAACCTGCAACGAGAGGCGAAGAAACGTTGC
CCGCCGCTCCTTGATCGCGGATCATATATCGGACCCGTGTCTGTCAGGCC
AACGGAGTCTCGCGGTCGAGGCTTATTCACGACAGAGGCTGTTCGAGCCG
GTGATCTATTATTTTGCGAGAAAGCCTTTGCGCATGCATTTCATGACGAA
GTCGCCGGTGCTTCGGGCAGCGTCTCGATCTTGATGAACCCGGAAACAAA
CACCATCACAGTGGGTACTCAGGCGGACCTTATCGCTTTAATCGCACAGA
AACTATACAAAAACCCGTCGCTTAGGTCGAAGTTCACTGACCTTTATCAC
GGTTCGTACCATCCTGTTGAGGTTGCGGAAGTTGACGGTACACCTGTCGT
AGACACATGGACACTCAAGATGTTTCTCAAGCACCGGAATACCTGCAATA
CCTACAGAAACAGAAGCGAGTTCTCCAAAATGCGCAACTCCACAAGGGCA
AGACTCTCAAGCCCACCAAGTCTCGCGACGAAATCATAATGGAGTTCATG
TTTCGTCAGATGATGTCTAGTAATAAACTTGCCAACAAGCATCAGATTCG
CTCGTCGTTTGTGCCTCCAGCCTACCCGCCCTCTGTTGCTGCTTTGAGTA
CCCTGAAACGAGTATTCATCAGAGATCTTACTCTTGAAACTCATCATCGT
GGATTCTACATTCTGCTTAAAGCAGTCACGCCGACAGATAGAATGACTGC
GGTGATGGCCGTAGTAGAAGATGAAAGAGGGGATGTTCTCATGTTACAAT
TATACAATCAGGAGGAAGAGCTCTCGACCGATGGCCGTCTCGTCGAAGGG
ACAGTGATACTTGTGAAGGAACCTTACTTGAAGATCATGGCTGATGAAAA
TTACGGAATCCGAGTCGACCATCTCTCTGACCTTAGATTTCTCCCAAGCC
ATGACCCTTTAGTACCCGTGTCATGGGGAGGTCGACGCGGAATGGATCAA
ACGGCCAGCTATTGCAAAACAAAAGCCAACGACCATTTCAACAAGGGTCA
GTACTATCTTGCTATTGATTGCTTTCTCATTGAGCGTATAATGTCACTCA
ACTGCTTCGGTTGCCCCCTCTCCTCCCGCGAATCCCACCTATGCACCATG
AAAGACGCCGGATCACAGTCAGAACCCGCTGAGAACAAGAAGTTCCACTC
CTGCGGTGTCTGGCCTCTAGCATCCTACATCAACCATTCCTGCTACAGCA
ATGTTCGCCGCTCATTCATTGGTGATATGTTGATCGTCCGTGCTACTCAG
GACCTCCCTGCGAATACCGAGCTGTTTTTCTGGTACCAACAACCCTCGGA
CAGCACTTCCAAGGCAAAACAACTCAACCTGAAACACTGGGGCTTCAAGT
GCAACTGCGTGATCTGTCAAGATTCCACTGAGACAGAGGAGAGTGATCTG
ATGAAGCGAAGGAGGCTCACAGCGGACTTGGTGAATGCTTTTCGGGCCCT
GAGCAAGCCCCGCAAGCCGAAGTCAGCTATGGCTCGAATTGAGGAACTTA
TTTCTAAACTTGAGGAGACGTATCGCAAGCCAGCCGTTCAAGTCCCACGT
CTCGGTATCTGGAAGGCGTATTTGGGCATAGCGGAGGCCCACGCCGCACA
GGGCGTCTTAGCGAAGACTGTTGAGTTTGCACTGAAGACTTTAGAGTCAC
TTGGGTATGTGCTTGAAGGCGGAGGAGTCCCGTATACTTCTGGTGCACCG
CTACACGTTATGAAATGGGGTCTGATGATGGATGGACTTGTTAGATGTTG
GATGATTCTTTGCAGAGCGTATTGCGATTTAGCTCCTGAACTAGCAAGTC
AAGCAGAGGACTATGCTAGGATCACCTATAGGATATGCGTTGGTGAGGAT
GAGACTTTTGCGGATACGTACAGTCGATTCTCAAAGGGGACAGATGGGCT
TCTTGATGGGGTGAAATAGGTACTCCAAGGCTCTGGATACCTCCCCAACA
ACCGATGAAGCCCTCATAATCAGGCTCAACCGCGCTCTTACTTATCTCAA
GACTCATCAATTTGACGCGGCGCTTTATGACCTCAAAACTGTCTTGTCAG
ACCAGGAATCTTCCGAAAAAGCCCTCTTTCGCAAATCTCAGGCTCTTTAC
CATCTCGCCAGATTTGAAGAATCCTGCAAAGTCCACCAAGTGCTCTTTGC
CACGTTTCCGAATAACACCGCCGCTAAACTCGAGTTTAATCGCGCCACTG
CACGGCTTGCAGAAGAGCGGACTGGGAAATACCCTTTCAAGAACCTGCAA
CGAGAGGCGAAGAAACGTTGCCCGCCGCTCCTTGATCGCGGATCATATAT
CGGACCCGTGTCTGTCAGGCCAACGGAGTCTCGCGGTCGAGGCTTATTCA
CGACAGAGGCTGTTCGAGCCGGTGATCTATTATTTTGCGAGAAAGCCTTT
GCGCATGCATTTCATGACGAAGTCGCCGGTGCTTCGGGCAGCGTCTCGAT
CTTGATGAACCCGGAAACAAACACCATCACAGTGGGTACTCAGGCGGACC
TTATCGCTTTAATCGCACAGAAACTATACAAAAACCCGTCGCTTAGGTCG
AAGTTCACTGACCTTTATCACGGTTCGTACCATCCTGTTGAGGTTGCGGA
AGTTGACGGTACACCTGTCGTAGACACATGGACACTCAAGATGTTTCTCA
AGCACCGGAATACCTGCAATACCTACAGAAACAGAAGCGAGTTCTCCAAA
ATGCGCAACTCCACAAGGGCAAGACTCTCAAGCCCACCAAGTCTCGCGAC
GAAATCATAATGGAGTTCATGTTTCGTCAGATGATGTCTAGTAATAAACT
TGCCAACAAGCATCAGATTCGCTCGTCGTTTGTGCCTCCAGCCTACCCGC
CCTCTGTTGCTGCTTTGAGTACCCTGAAACGAGTATTCATCAGAGATCTT
ACTCTTGAAACTCATCATCGTGGATTCTACATTCTGCTTAAAGCAGTCAC
GCCGACAGATAGAATGACTGCGGTGATGGCCGTAGTAGAAGATGAAAGAG
GGGATGTTCTCATGTTACAATTATACAATCAGGAGGAAGAGCTCTCGACC
GATGGCCGTCTCGTCGAAGGGACAGTGATACTTGTGAAGGAACCTTACTT
GAAGATCATGGCTGATGAAAATTACGGAATCCGAGTCGACCATCTCTCTG
ACCTTAGATTTCTCCCAAGCCATGACCCTTTAGTACCCGTGTCATGGGGA
GGTCGACGCGGAATGGATCAAACGGCCAGCTATTGCAAAACAAAAGCCAA
CGACCATTTCAACAAGGGTCAGTACTATCTTGCTATTGATTGCTTTCTCA
TTGAGCGTATAATGTCACTCAACTGCTTCGGTTGCCCCCTCTCCTCCCGC
GAATCCCACCTATGCACCATGAAAGACGCCGGATCACAGTCAGAACCCGC
TGAGAACAAGAAGTTCCACTCCTGCGGTGTCTGGCCTCTAGCATCCTACA
TCAACCATTCCTGCTACAGCAATGTTCGCCGCTCATTCATTGGTGATATG
TTGATCGTCCGTGCTACTCAGGACCTCCCTGCGAATACCGAGCTGTTTTT
CTGGTACCAACAACCCTCGGACAGCACTTCCAAGGCAAAACAACTCAACC
TGAAACACTGGGGCTTCAAGTGCAACTGCGTGATCTGTCAAGATTCCACT
GAGACAGAGGAGAGTGATCTGATGAAGCGAAGGAGGCTCACAGCGGACTT
GGTGAATGCTTTTCGGGCCCTGAGCAAGCCCCGCAAGCCGAAGTCAGCTA
TGGCTCGAATTGAGGAACTTATTTCTAAACTTGAGGAGACGTATCGCAAG
CCAGCCGTTCAAGTCCCACGTCTCGGTATCTGGAAGGCGTATTTGGGCAT
AGCGGAGGCCCACGCCGCACAGGGCGTCTTAGCGAAGACTGTTGAGTTTG
CACTGAAGACTTTAGAGTCACTTGGGTATGTGCTTGAAGGCGGAGGAGTC
CCGTATACTTCTGGTGCACCGCTACACGTTATGAAATGGGGTCTGATGAT
GGATGGACTTGTTAGATGTTGGATGATTCTTTGCAGAGCGTATTGCGATT
TAGCTCCTGAACTAGCAAGTCAAGCAGAGGACTATGCTAGGATCACCTAT
AGGATATGCGTTGGTGAGGATGAGACTTTTGCGGATACGTACAGTCGATT
CTCAAAGGGGACAGATGGGCTTCTTGATGGGGTGAAATAGGTACTCCAAG
GCTCTGGATACCTCCCCAACAACCGATGAAGCCCTCATAATCAGGCTCAA
CCGCGCTCTTACTTATCTCAAGACTCATCAATTTGACGCGGCGCTTTATG
ACCTCAAAACTGTCTTGTCAGACCAGGAATCTTCCGAAAAAGCCCTCTTT
CGCAAATCTCAGGCTCTTTACCATCTCGCCAGATTTGAAGAATCCTGCAA
AGTCCACCAAGTGCTCTTTGCCACGTTTCCGAATAACACCGCCGCTAAAC
TCGAGTTTAATCGCGCCACTGCACGGCTTGCAGAAGAGCGGACTGGGAAA
TACCCTTTCAAGAACCTGCAACGAGAGGCGAAGAAACGTTGCCCGCCGCT
CCTTGATCGCGGATCATATATCGGACCCGTGTCTGTCAGGCCAACGGAGT
CTCGCGGTCGAGGCTTATTCACGACAGAGGCTGTTCGAGCCGGTGATCTA
TTATTTTGCGAGAAAGCCTTTGCGCATGCATTTCATGACGAAGTCGCCGG
TGCTTCGGGCAGCGTCTCGATCTTGATGAACCCGGAAACAAACACCATCA
CAGTGGGTACTCAGGCGGACCTTATCGCTTTAATCGCACAGAAACTATAC
AAAAACCCGTCGCTTAGGTCGAAGTTCACTGACCTTTATCACGGTTCGTA
CCATCCTGTTGAGGTTGCGGAAGTTGACGGTACACCTGTCGTAGACACAT
GGACACTCAAGATGTTTCTCAAGCACCGGAATACCTGCAATACCTACAGA
AACAGAAGCGAGTTCTCCAAAATGCGCAACTCCACAAGGGCAAGACTCTC
AAGCCCACCAAGTCTCGCGACGAAATCATAATGGAGTTCATGTTTCGTCA
GATGATGTCTAGTAATAAACTTGCCAACAAGCATCAGATTCGCTCGTCGT
TTGTGCCTCCAGCCTACCCGCCCTCTGTTGCTGCTTTGAGTACCCTGAAA
CGAGTATTCATCAGAGATCTTACTCTTGAAACTCATCATCGTGGATTCTA
CATTCTGCTTAAAGCAGTCACGCCGACAGATAGAATGACTGCGGTGATGG
CCGTAGTAGAAGATGAAAGAGGGGATGTTCTCATGTTACAATTATACAAT
CAGGAGGAAGAGCTCTCGACCGATGGCCGTCTCGTCGAAGGGACAGTGAT
ACTTGTGAAGGAACCTTACTTGAAGATCATGGCTGATGAAAATTACGGAA
TCCGAGTCGACCATCTCTCTGACCTTAGATTTCTCCCAAGCCATGACCCT
TTAGTACCCGTGTCATGGGGAGGTCGACGCGGAATGGATCAAACGGCCAG
CTATTGCAAAACAAAAGCCAACGACCATTTCAACAAGGGTCAGTACTATC
TTGCTATTGATTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010916-T1.utr3p1 | KJC3_010916-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR019734 |
| DBxref | InterPro:IPR001214 |
| DBxref | PFAM:PF00856 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4675701..4678114 - |
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