|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4678364..4681308- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010917-T1 ID=KJC3_010917-T1|Name=KJC3_010917-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2945bp|location=Sequence derived from alignment at ch7:4678364..4681308- (Aspergillus niger KJC3)
ACTCGACTAAATCTTCTGGAAAGATGAGCACTACTCCGGAGGATGATTAC
TTGGTCCGGCTTGGAGCCCGACTGGCAGAAATCCCAGTTGGGCTCAAGTA
AACATCTAAGTGGACACCGGCATTTATTCCTGGACGCTGTACCACCGGGC
TCCAGCCTTTAAAGGACGGTTCCAGCCAAAAATCTCAATGGCCAGCTAAG
TCGAAAAATCCCAGGGGAGATGTCACGCAAGCATGCTCGCAATTCCATGG
TGGAAGATGTGGTCATTCCTGCCCATCTCCTGGCCGCCACCACCCAAGTA
AACGGTCCCTTTACAGCTCGGAGTGACGAGGCATCTGAGTCTGGGCCTGG
CCCTATTCATCAGGCCATCCGCACTGAGGCATTGGAACGACAGTTTGGTC
AGCTCCGCCGCTCAGCCAGTGTGAACAGCTCACATCCACAAAAGCCTAAG
GATACTCGCTTCCGGCGCCAGAGTGCACCCTTGAGTGTAGCTGAGATATC
TACGATTGCGGAGATCGAACCAGCACAACTTTCGCCCAATGGGTCTTCTC
ATGTCCAGTGGCAGCATGGCCAGGACGACTTCGGAGCACACAGCAGACAG
CTGAGCGAGTCAATTCCGGCGACGAGGGGTGACGCGTGGCCTCTTCCACC
CCGACCTCACAGTTACCGTATCTCCCGCATTGAACCGACAGAGGAGCCTC
CCCAACGGACAAACCGACACAGTATATACGATGTATACGAGAAGGCCAAA
GAAAGGCGCATCGCCCTGCAGAGAAAGTACTGGGTGCAGGTCCTCTTCGA
ATACACAGTATATATTTTCCTTGCAGCCTTCATCTACTTCGTCCTGATTG
GGATGCCCCTCTGGCGAGGTGCCGTGTGGTGGCTCTACTACGTAGTGCGT
ACCAAGTTTGTCATTCCAGGTGGCTGGGGAATCACAATTGGCATTGCTAT
TCTGTAGGTATCGCTCATCGTCTTTACGACAAGAGACTAATGACTTACTC
CAAAGCTACGCGTTTACTCCCTTGCTACTGCTCTTCGAGAAGAACCCTCC
CCCTGTGGACAGCAATTCAAAAGAGGGCGACCTCGAGGGCAATCGAAACA
CAGCGAAAAGTACAGCCCTTCTCATTCCCTGCTATAAATCTGCCAACATT
ATTGGCCCGACACTCGACGCGGCGCTACACATCTTTCCGCCTGAAAACAT
TTTCGTCATTGCGAACGGCAACTCCCCAGAGCCATTAGACAATACTGAAG
AAGTGTGCCGCCCATACGGCGTAAACCACCTTTGGTGTCCAGTTGGAAGC
AAGATTATCGCCCAGTTTGTTGGTTGCTACGCGGCTAAAGAGTTTCCCCA
TGTTCTCCTGATCGACGACGACTGCGCACTGCCTCCGAACTTTCCTGTCG
TTAGTGACCGACTCAAAGGCCGTGTACAATGTATCGGATATACCATTAAG
AGTGTTGGGCCCGAGTCCTCACGCGGCACCTTATGCCAGCAGGCACAGGA
CCTCGAGTACAAGATATCAGGCCTTCAGCGTGCATTCGCCGGTCTTTTAG
GCAGCGCAACATTCCCGCACGGAGCCATCTCTCTATGGAAGACCGACTTC
CTCAAGCAGACCTTCCATGACCATCCAGGATTCTCTGTGTCTGAAGATTG
GTTTTTCGGAGATAGCTGTCGTCGGCTAGGCGGGCGTATCAAGATGTGCT
CTGCTGTTTTTGTTGAGACAGAGACCCCGTCCGCCGTTTTCTTCAGTTCA
GGCGGCTCACGAGGAGGATTCGGCGAGATGACCATCTTCAAACAGAGATT
TATGCGCTGGAACTTCTTCTTCGTCAACGGCATGTGGTACAATATGAAAT
ATATCTTATGCAGCTGGAATCTCGGTTTCTGGGAGCTGGGCGCGAAGCTG
TTTGTTTTTCAAGAGGTAGGTTCTACATCCGCCGAGCTGTGCAATGGCAC
AAACAACAAGACCTTATGCTTACTAAAACCAGGTCTACGAAACCCTACTA
TACCTCCTCGCTCCGTTCGTCCTACCGATTTCGCTCGTGGTCCAACCAGC
ATTCTGCGGCATCATGTTGGGCGTCACCAACGGCTTGTACTTTCTAAACG
TCGTCATCTTCAACCTGGTACATCTACGCCTGAAGAAGGAAGCTGTCTCC
TGGAAATGCTTGCTCCTCTACTACATGCCGTATAAAATCGTCCTTTTCAT
CATCAACGTCGTCAGCTGCTATTGGTCTCTGTTCAAGTACGCCCGGTACT
TCGCCACGAGACACCCCAAAGTCATCGAGGATGACAAAGCTGTGGAGGTA
GTACTGCGTCTAGAAGATACCACTAATAATGATCCCAAGCCAACGAACAA
GGCACCGGGTCTTGGTCGGAGTTTCTCCGTGACTAAGGTCAGGGCTAGGA
AGACTAGCAACGCGGGCTCAAAACCGGCCGGGCCTGGAGGTGTTTCTGTT
GCTGGTGCCGAGGGCTCTTGGATTTGATCGAAGTTGATTGCTGCTTTCTC
CTGTATATATTTAGAATAACCTCATCATAGTGAACAAGACTTACAGAGCT
ACGAAAGATTTGCGGTTGAAGACCATGTCCGTGATATAATCGCACAATCA
TGCACGATTACTCGAAGCTTGGAAGAGATTTCAACTCGGCAATAGAGTCA
GATTCGATAACCACGGGAATGCTCTGGATGAAGGAGGAGCTGGTACACCA
GAAGAACCCCATTCTAGTTCCCATTGATCCCGGCCCGACCAAATCTGTAT
CCATCAAGTTGACGACATACAATCCGCCGCATAAGTCCTCCGTCGAGAAC
TTGTGAGTTGGACTTTGGGACTTATTCCCTGCATGGAGCAGTGAGATCCG
GCACATGCTGGGAACGCGCTACTAACGTTAGCGTATGCACGTCGATTCGT
AACCCGTTCAATACCCCAGGTTCAGAATCCAATTACATGCAGGAT back to topCoding sequence (CDS) from alignment at ch7:4678364..4681308- >KJC3_010917-T1 ID=KJC3_010917-T1|Name=KJC3_010917-T1|organism=Aspergillus niger KJC3|type=CDS|length=6417bp|location=Sequence derived from alignment at ch7:4678364..4681308- (Aspergillus niger KJC3)
GTCTACGAAACCCTACTATACCTCCTCGCTCCGTTCGTCCTACCGATTTC
GCTCGTGGTCCAACCAGCATTCTGCGGCATCATGTTGGGCGTCACCAACG
GCTTGTACTTTCTAAACGTCGTCATCTTCAACCTGGTACATCTACGCCTG
AAGAAGGAAGCTGTCTCCTGGAAATGCTTGCTCCTCTACTACATGCCGTA
TAAAATCGTCCTTTTCATCATCAACGTCGTCAGCTGCTATTGGTCTCTGT
TCAAGTACGCCCGGTACTTCGCCACGAGACACCCCAAAGTCATCGAGGAT
GACAAAGCTGTGGAGGTAGTACTGCGTCTAGAAGATACCACTAATAATGA
TCCCAAGCCAACGAACAAGGCACCGGGTCTTGGTCGGAGTTTCTCCGTGA
CTAAGGTCAGGGCTAGGAAGACTAGCAACGCGGGCTCAAAACCGGCCGGG
CCTGGAGGTGTTTCTGTTGCTGGTGCCGAGGGCTCTTGGATTTGACTACG
CGTTTACTCCCTTGCTACTGCTCTTCGAGAAGAACCCTCCCCCTGTGGAC
AGCAATTCAAAAGAGGGCGACCTCGAGGGCAATCGAAACACAGCGAAAAG
TACAGCCCTTCTCATTCCCTGCTATAAATCTGCCAACATTATTGGCCCGA
CACTCGACGCGGCGCTACACATCTTTCCGCCTGAAAACATTTTCGTCATT
GCGAACGGCAACTCCCCAGAGCCATTAGACAATACTGAAGAAGTGTGCCG
CCCATACGGCGTAAACCACCTTTGGTGTCCAGTTGGAAGCAAGATTATCG
CCCAGTTTGTTGGTTGCTACGCGGCTAAAGAGTTTCCCCATGTTCTCCTG
ATCGACGACGACTGCGCACTGCCTCCGAACTTTCCTGTCGTTAGTGACCG
ACTCAAAGGCCGTGTACAATGTATCGGATATACCATTAAGAGTGTTGGGC
CCGAGTCCTCACGCGGCACCTTATGCCAGCAGGCACAGGACCTCGAGTAC
AAGATATCAGGCCTTCAGCGTGCATTCGCCGGTCTTTTAGGCAGCGCAAC
ATTCCCGCACGGAGCCATCTCTCTATGGAAGACCGACTTCCTCAAGCAGA
CCTTCCATGACCATCCAGGATTCTCTGTGTCTGAAGATTGGTTTTTCGGA
GATAGCTGTCGTCGGCTAGGCGGGCGTATCAAGATGTGCTCTGCTGTTTT
TGTTGAGACAGAGACCCCGTCCGCCGTTTTCTTCAGTTCAGGCGGCTCAC
GAGGAGGATTCGGCGAGATGACCATCTTCAAACAGAGATTTATGCGCTGG
AACTTCTTCTTCGTCAACGGCATGTGGTACAATATGAAATATATCTTATG
CAGCTGGAATCTCGGTTTCTGGGAGCTGGGCGCGAAGCTGTTTGTTTTTC
AAGAGATGTCACGCAAGCATGCTCGCAATTCCATGGTGGAAGATGTGGTC
ATTCCTGCCCATCTCCTGGCCGCCACCACCCAAGTAAACGGTCCCTTTAC
AGCTCGGAGTGACGAGGCATCTGAGTCTGGGCCTGGCCCTATTCATCAGG
CCATCCGCACTGAGGCATTGGAACGACAGTTTGGTCAGCTCCGCCGCTCA
GCCAGTGTGAACAGCTCACATCCACAAAAGCCTAAGGATACTCGCTTCCG
GCGCCAGAGTGCACCCTTGAGTGTAGCTGAGATATCTACGATTGCGGAGA
TCGAACCAGCACAACTTTCGCCCAATGGGTCTTCTCATGTCCAGTGGCAG
CATGGCCAGGACGACTTCGGAGCACACAGCAGACAGCTGAGCGAGTCAAT
TCCGGCGACGAGGGGTGACGCGTGGCCTCTTCCACCCCGACCTCACAGTT
ACCGTATCTCCCGCATTGAACCGACAGAGGAGCCTCCCCAACGGACAAAC
CGACACAGTATATACGATGTATACGAGAAGGCCAAAGAAAGGCGCATCGC
CCTGCAGAGAAAGTACTGGGTGCAGGTCCTCTTCGAATACACAGTATATA
TTTTCCTTGCAGCCTTCATCTACTTCGTCCTGATTGGGATGCCCCTCTGG
CGAGGTGCCGTGTGGTGGCTCTACTACGTAGTGCGTACCAAGTTTGTCAT
TCCAGGTGGCTGGGGAATCACAATTGGCATTGCTATTCTGTCTACGAAAC
CCTACTATACCTCCTCGCTCCGTTCGTCCTACCGATTTCGCTCGTGGTCC
AACCAGCATTCTGCGGCATCATGTTGGGCGTCACCAACGGCTTGTACTTT
CTAAACGTCGTCATCTTCAACCTGGTACATCTACGCCTGAAGAAGGAAGC
TGTCTCCTGGAAATGCTTGCTCCTCTACTACATGCCGTATAAAATCGTCC
TTTTCATCATCAACGTCGTCAGCTGCTATTGGTCTCTGTTCAAGTACGCC
CGGTACTTCGCCACGAGACACCCCAAAGTCATCGAGGATGACAAAGCTGT
GGAGGTAGTACTGCGTCTAGAAGATACCACTAATAATGATCCCAAGCCAA
CGAACAAGGCACCGGGTCTTGGTCGGAGTTTCTCCGTGACTAAGGTCAGG
GCTAGGAAGACTAGCAACGCGGGCTCAAAACCGGCCGGGCCTGGAGGTGT
TTCTGTTGCTGGTGCCGAGGGCTCTTGGATTTGACTACGCGTTTACTCCC
TTGCTACTGCTCTTCGAGAAGAACCCTCCCCCTGTGGACAGCAATTCAAA
AGAGGGCGACCTCGAGGGCAATCGAAACACAGCGAAAAGTACAGCCCTTC
TCATTCCCTGCTATAAATCTGCCAACATTATTGGCCCGACACTCGACGCG
GCGCTACACATCTTTCCGCCTGAAAACATTTTCGTCATTGCGAACGGCAA
CTCCCCAGAGCCATTAGACAATACTGAAGAAGTGTGCCGCCCATACGGCG
TAAACCACCTTTGGTGTCCAGTTGGAAGCAAGATTATCGCCCAGTTTGTT
GGTTGCTACGCGGCTAAAGAGTTTCCCCATGTTCTCCTGATCGACGACGA
CTGCGCACTGCCTCCGAACTTTCCTGTCGTTAGTGACCGACTCAAAGGCC
GTGTACAATGTATCGGATATACCATTAAGAGTGTTGGGCCCGAGTCCTCA
CGCGGCACCTTATGCCAGCAGGCACAGGACCTCGAGTACAAGATATCAGG
CCTTCAGCGTGCATTCGCCGGTCTTTTAGGCAGCGCAACATTCCCGCACG
GAGCCATCTCTCTATGGAAGACCGACTTCCTCAAGCAGACCTTCCATGAC
CATCCAGGATTCTCTGTGTCTGAAGATTGGTTTTTCGGAGATAGCTGTCG
TCGGCTAGGCGGGCGTATCAAGATGTGCTCTGCTGTTTTTGTTGAGACAG
AGACCCCGTCCGCCGTTTTCTTCAGTTCAGGCGGCTCACGAGGAGGATTC
GGCGAGATGACCATCTTCAAACAGAGATTTATGCGCTGGAACTTCTTCTT
CGTCAACGGCATGTGGTACAATATGAAATATATCTTATGCAGCTGGAATC
TCGGTTTCTGGGAGCTGGGCGCGAAGCTGTTTGTTTTTCAAGAGATGTCA
CGCAAGCATGCTCGCAATTCCATGGTGGAAGATGTGGTCATTCCTGCCCA
TCTCCTGGCCGCCACCACCCAAGTAAACGGTCCCTTTACAGCTCGGAGTG
ACGAGGCATCTGAGTCTGGGCCTGGCCCTATTCATCAGGCCATCCGCACT
GAGGCATTGGAACGACAGTTTGGTCAGCTCCGCCGCTCAGCCAGTGTGAA
CAGCTCACATCCACAAAAGCCTAAGGATACTCGCTTCCGGCGCCAGAGTG
CACCCTTGAGTGTAGCTGAGATATCTACGATTGCGGAGATCGAACCAGCA
CAACTTTCGCCCAATGGGTCTTCTCATGTCCAGTGGCAGCATGGCCAGGA
CGACTTCGGAGCACACAGCAGACAGCTGAGCGAGTCAATTCCGGCGACGA
GGGGTGACGCGTGGCCTCTTCCACCCCGACCTCACAGTTACCGTATCTCC
CGCATTGAACCGACAGAGGAGCCTCCCCAACGGACAAACCGACACAGTAT
ATACGATGTATACGAGAAGGCCAAAGAAAGGCGCATCGCCCTGCAGAGAA
AGTACTGGGTGCAGGTCCTCTTCGAATACACAGTATATATTTTCCTTGCA
GCCTTCATCTACTTCGTCCTGATTGGGATGCCCCTCTGGCGAGGTGCCGT
GTGGTGGCTCTACTACGTAGTGCGTACCAAGTTTGTCATTCCAGGTGGCT
GGGGAATCACAATTGGCATTGCTATTCTGTCTACGAAACCCTACTATACC
TCCTCGCTCCGTTCGTCCTACCGATTTCGCTCGTGGTCCAACCAGCATTC
TGCGGCATCATGTTGGGCGTCACCAACGGCTTGTACTTTCTAAACGTCGT
CATCTTCAACCTGGTACATCTACGCCTGAAGAAGGAAGCTGTCTCCTGGA
AATGCTTGCTCCTCTACTACATGCCGTATAAAATCGTCCTTTTCATCATC
AACGTCGTCAGCTGCTATTGGTCTCTGTTCAAGTACGCCCGGTACTTCGC
CACGAGACACCCCAAAGTCATCGAGGATGACAAAGCTGTGGAGGTAGTAC
TGCGTCTAGAAGATACCACTAATAATGATCCCAAGCCAACGAACAAGGCA
CCGGGTCTTGGTCGGAGTTTCTCCGTGACTAAGGTCAGGGCTAGGAAGAC
TAGCAACGCGGGCTCAAAACCGGCCGGGCCTGGAGGTGTTTCTGTTGCTG
GTGCCGAGGGCTCTTGGATTTGACTACGCGTTTACTCCCTTGCTACTGCT
CTTCGAGAAGAACCCTCCCCCTGTGGACAGCAATTCAAAAGAGGGCGACC
TCGAGGGCAATCGAAACACAGCGAAAAGTACAGCCCTTCTCATTCCCTGC
TATAAATCTGCCAACATTATTGGCCCGACACTCGACGCGGCGCTACACAT
CTTTCCGCCTGAAAACATTTTCGTCATTGCGAACGGCAACTCCCCAGAGC
CATTAGACAATACTGAAGAAGTGTGCCGCCCATACGGCGTAAACCACCTT
TGGTGTCCAGTTGGAAGCAAGATTATCGCCCAGTTTGTTGGTTGCTACGC
GGCTAAAGAGTTTCCCCATGTTCTCCTGATCGACGACGACTGCGCACTGC
CTCCGAACTTTCCTGTCGTTAGTGACCGACTCAAAGGCCGTGTACAATGT
ATCGGATATACCATTAAGAGTGTTGGGCCCGAGTCCTCACGCGGCACCTT
ATGCCAGCAGGCACAGGACCTCGAGTACAAGATATCAGGCCTTCAGCGTG
CATTCGCCGGTCTTTTAGGCAGCGCAACATTCCCGCACGGAGCCATCTCT
CTATGGAAGACCGACTTCCTCAAGCAGACCTTCCATGACCATCCAGGATT
CTCTGTGTCTGAAGATTGGTTTTTCGGAGATAGCTGTCGTCGGCTAGGCG
GGCGTATCAAGATGTGCTCTGCTGTTTTTGTTGAGACAGAGACCCCGTCC
GCCGTTTTCTTCAGTTCAGGCGGCTCACGAGGAGGATTCGGCGAGATGAC
CATCTTCAAACAGAGATTTATGCGCTGGAACTTCTTCTTCGTCAACGGCA
TGTGGTACAATATGAAATATATCTTATGCAGCTGGAATCTCGGTTTCTGG
GAGCTGGGCGCGAAGCTGTTTGTTTTTCAAGAGATGTCACGCAAGCATGC
TCGCAATTCCATGGTGGAAGATGTGGTCATTCCTGCCCATCTCCTGGCCG
CCACCACCCAAGTAAACGGTCCCTTTACAGCTCGGAGTGACGAGGCATCT
GAGTCTGGGCCTGGCCCTATTCATCAGGCCATCCGCACTGAGGCATTGGA
ACGACAGTTTGGTCAGCTCCGCCGCTCAGCCAGTGTGAACAGCTCACATC
CACAAAAGCCTAAGGATACTCGCTTCCGGCGCCAGAGTGCACCCTTGAGT
GTAGCTGAGATATCTACGATTGCGGAGATCGAACCAGCACAACTTTCGCC
CAATGGGTCTTCTCATGTCCAGTGGCAGCATGGCCAGGACGACTTCGGAG
CACACAGCAGACAGCTGAGCGAGTCAATTCCGGCGACGAGGGGTGACGCG
TGGCCTCTTCCACCCCGACCTCACAGTTACCGTATCTCCCGCATTGAACC
GACAGAGGAGCCTCCCCAACGGACAAACCGACACAGTATATACGATGTAT
ACGAGAAGGCCAAAGAAAGGCGCATCGCCCTGCAGAGAAAGTACTGGGTG
CAGGTCCTCTTCGAATACACAGTATATATTTTCCTTGCAGCCTTCATCTA
CTTCGTCCTGATTGGGATGCCCCTCTGGCGAGGTGCCGTGTGGTGGCTCT
ACTACGTAGTGCGTACCAAGTTTGTCATTCCAGGTGGCTGGGGAATCACA
ATTGGCATTGCTATTCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010917-T1.utr3p1 | KJC3_010917-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010917-T1.utr5p1 | KJC3_010917-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT2_Glyco_tranf_2_3 |
| DBxref | InterPro:IPR029044 |
| DBxref | PFAM:PF13632 |
| DBxref | PFAM:PF13641 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4678364..4681308 - |
|
