|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4721886..4722615+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010933-T1 ID=KJC3_010933-T1|Name=KJC3_010933-T1|organism=Aspergillus niger KJC3|type=mRNA|length=730bp|location=Sequence derived from alignment at ch7:4721886..4722615+ (Aspergillus niger KJC3)
GTAACATACACGATCTTATTTTGAATCTATACATTCGTTCACTTATTTCT
TTTCATACAACAAGATACCCTTATAATCATCTCTCGCTCATCACAAATCC
CAATTTCTCACCACCACAACCACACGTACTTAAAAACAGATAATCAATCA
AAATGGGTGAAGGTCAAGAATGGTCCTCCAGCTTCTGGGACTGCTGCTCC
CCCTGCGGCACCTGTACGTCTCCCTCCCCCTCCCTCCCCTCTCAACAACC
CCCAATTACCCCCAAAACTAACCAAATATACTTACACAATGAACAGGCTC
CCTCGCCTTCTGCTGCCCCTGCTGCCTCCACGGCCGCACCAGTTCTCGTC
TCGAAGACCCCACCCTGAAAGACGATAGCATGATGAACGGTGGTGTACGT
CCCCTATCCCTAATACTATACAGCCAAACCCATCCTTCCTCCTATAACAA
CCAATTTGATACTAATACTGATAATGTAATACAGTGCTGCGTTTACTTCC
TTCTCGCTTACTGCGGCTTCCACTTCATCCCATTGATGATGAAGCGCGGC
CAAATCAGAGAGAGATTCGGGCTTGAGGGGTCCGGATGCGGGGACTGTAT
GCGGTCGTTCTGCTGCCCGTGCTGCACGCTCATGCAGCATGAGAAGGAAT
TGGAGAGTCGGGCGGCGTTGTTGGAGGGGCCTGGTGCGCAGCAGGGATAT
AAGGCTCCCGCGGGGATGGCGTATCAGTGA back to topCoding sequence (CDS) from alignment at ch7:4721886..4722615+ >KJC3_010933-T1 ID=KJC3_010933-T1|Name=KJC3_010933-T1|organism=Aspergillus niger KJC3|type=CDS|length=1215bp|location=Sequence derived from alignment at ch7:4721886..4722615+ (Aspergillus niger KJC3)
ATGGGTGAAGGTCAAGAATGGTCCTCCAGCTTCTGGGACTGCTGCTCCCC
CTGCGGCACCTGCTCCCTCGCCTTCTGCTGCCCCTGCTGCCTCCACGGCC
GCACCAGTTCTCGTCTCGAAGACCCCACCCTGAAAGACGATAGCATGATG
AACGGTGGTTGCTGCGTTTACTTCCTTCTCGCTTACTGCGGCTTCCACTT
CATCCCATTGATGATGAAGCGCGGCCAAATCAGAGAGAGATTCGGGCTTG
AGGGGTCCGGATGCGGGGACTGTATGCGGTCGTTCTGCTGCCCGTGCTGC
ACGCTCATGCAGCATGAGAAGGAATTGGAGAGTCGGGCGGCGTTGTTGGA
GGGGCCTGGTGCGCAGCAGGGATATAAGGCTCCCGCGGGGATGGCGTATC
AGTGAATGGGTGAAGGTCAAGAATGGTCCTCCAGCTTCTGGGACTGCTGC
TCCCCCTGCGGCACCTGCTCCCTCGCCTTCTGCTGCCCCTGCTGCCTCCA
CGGCCGCACCAGTTCTCGTCTCGAAGACCCCACCCTGAAAGACGATAGCA
TGATGAACGGTGGTTGCTGCGTTTACTTCCTTCTCGCTTACTGCGGCTTC
CACTTCATCCCATTGATGATGAAGCGCGGCCAAATCAGAGAGAGATTCGG
GCTTGAGGGGTCCGGATGCGGGGACTGTATGCGGTCGTTCTGCTGCCCGT
GCTGCACGCTCATGCAGCATGAGAAGGAATTGGAGAGTCGGGCGGCGTTG
TTGGAGGGGCCTGGTGCGCAGCAGGGATATAAGGCTCCCGCGGGGATGGC
GTATCAGTGAATGGGTGAAGGTCAAGAATGGTCCTCCAGCTTCTGGGACT
GCTGCTCCCCCTGCGGCACCTGCTCCCTCGCCTTCTGCTGCCCCTGCTGC
CTCCACGGCCGCACCAGTTCTCGTCTCGAAGACCCCACCCTGAAAGACGA
TAGCATGATGAACGGTGGTTGCTGCGTTTACTTCCTTCTCGCTTACTGCG
GCTTCCACTTCATCCCATTGATGATGAAGCGCGGCCAAATCAGAGAGAGA
TTCGGGCTTGAGGGGTCCGGATGCGGGGACTGTATGCGGTCGTTCTGCTG
CCCGTGCTGCACGCTCATGCAGCATGAGAAGGAATTGGAGAGTCGGGCGG
CGTTGTTGGAGGGGCCTGGTGCGCAGCAGGGATATAAGGCTCCCGCGGGG
ATGGCGTATCAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010933-T1.utr5p1 | KJC3_010933-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006461 |
| DBxref | PFAM:PF04749 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4721886..4722615 + |
|
