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KJC3_010936-T1, KJC3_010936-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010936-T1
Unique NameKJC3_010936-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4726533..4728281-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010936-T1 ID=KJC3_010936-T1|Name=KJC3_010936-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1749bp|location=Sequence derived from alignment at ch7:4726533..4728281- (Aspergillus niger KJC3)
CGACAAACAGCACGGCCTCGACCGAACACTGAACGCCAGTGCGGGTGCGA
TTTTTTTTGCAAAAGCTTCTATTCAAGGTCCTCGAGACTCGACAATTCCG
GATTTTCCTTCTCCCGAACGGGCCTTCCTTGCCAATTTTTCTTTTTCCTA
TTCTCCGGTTAAACCGCAACCGAAGAATCGAAGCATCAGTCCGATAATTT
TTCTGGACTGAGAGCATTTGGACTTTACGTCTTCGTCGACCTTTTTCGAT
TTAAATCACATATATCACAATGGCATTCGGTGGTCCTCGTGGTGGTGGCC
GTGGTGGTGGCCGTGGTGCTCCTCGTGGAGGTGGTGGCGGCCGTGGTGGT
AGAGGTTTGTTCACCATCGATTGATTTCATCTTGGGAGAAACGTGGCAGG
CAGGCATATGTGATCTTTTCGCATTGTTGTTGTCGATCATGTTGGAACTT
GCTTCTTGTGACGGAGAACCTTGTTCTTGTCCCAGAGCATATCAGGTTTT
CCAATATGAGCGACTCGACTCGCGTGCCGGAACTGCGGTTATCCCTTCAC
GGAAAAAAGGAACATGTCGCTAATCTTTGCACGTTCTATAGGCGGTCTTG
GTGCCGGTGGTCGTGGTCGCGGCGGTGGCCGTGGTGCTCCCCGCGGTGGT
CGTGGTGCCCCCCGTGGCCGTGGTGGTCCTCGCGGCGGTGGTCGCGGCGG
TGCTAAGGGTGCCAAGGGTGGTGCTAAGGTCATCATTGTAGGTGTTTCCT
GTTAAATCGATCGAGAAGAGAGACGTTGTATGGAGTCTAACCGGGATTCG
TCTAGGAACCCCACCGTCACGCTGGTGTCTTCGTCGCCCGTGGTGGTAAG
GAAGATTTGCTCGTCACCAAGAACCTTACTCCCGGAGAGGCCGTCTACGG
TGAGAAGCGCATCTCTGTTGAGTCCCCCGCTGAGGAGGATGGCACTGTGA
CCAAGACCGAATACCGTGTCTGGAACCCCTTCCGTTCCAAGTTGGCTGCC
GGTATCCTGGGTGGTCTGGATGACATCTACATGCGCCCTGGCTCCAAGGT
CCTGTATCTCGGTTCCGCCAGCGGTACCTCCGTCAGTCACGTTGCCGATA
TCGTCGGACCTACTGGTAACGTCTACGCTGTTGAGTTCTCCCACCGTTCC
GGCCGTGACTTGATCGGCATGGCTACCCACCGCACCAACGTTATCCCCAT
CGTCGAGGACGCCAGACACCCTCTTCGTTACCGTATGCTCGTCCCCATGG
TCGATGTCATCTTCGCCGATGTTGCCCAGCCCGACCAGGCCCGTATTGTC
GGCCTGAACGCCCACATGTTCCTCAAGGAGGGCGGTGGTGTCATTGTCTC
CGTCAAGGCCAACTGTATCGACAGTACCGCTAAGCCCGAGGTTGTGTTCG
CTCGTGAAGTCCAGAAGATGAGAGAGGAGCGGATCAAGCCCAGGGAACAG
CTGACCCTGGAGCCTTTCGAACGTGACCACTGTATAGTGTCTGGTATCTA
CAAGCGCTCTGCATGAATTTAAGAAACAAAAAGAATCCGGTGGTTTTTGC
TCTTTTGTCTCTCTCATGTCATAATTACTTATGCTTCCCCTTTATACGGC
GTCGAGTGTTCCGTGATCTGTTGCAATTTTCTTCGATTTTTTCCTTGTGT
GTCCTCATGTCCAGGTTTCTTAGATGTACTTCTTGAGTCAGAAAATTTCG
AGGTTTACGGTTTCTGGTCGTTCAAGAATTTAGCTGCTAATTAAGCTGG
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Coding sequence (CDS) from alignment at ch7:4726533..4728281-

>KJC3_010936-T1 ID=KJC3_010936-T1|Name=KJC3_010936-T1|organism=Aspergillus niger KJC3|type=CDS|length=2826bp|location=Sequence derived from alignment at ch7:4726533..4728281- (Aspergillus niger KJC3)
GAACCCCACCGTCACGCTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGA
TTTGCTCGTCACCAAGAACCTTACTCCCGGAGAGGCCGTCTACGGTGAGA
AGCGCATCTCTGTTGAGTCCCCCGCTGAGGAGGATGGCACTGTGACCAAG
ACCGAATACCGTGTCTGGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTAT
CCTGGGTGGTCTGGATGACATCTACATGCGCCCTGGCTCCAAGGTCCTGT
ATCTCGGTTCCGCCAGCGGTACCTCCGTCAGTCACGTTGCCGATATCGTC
GGACCTACTGGTAACGTCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCG
TGACTTGATCGGCATGGCTACCCACCGCACCAACGTTATCCCCATCGTCG
AGGACGCCAGACACCCTCTTCGTTACCGTATGCTCGTCCCCATGGTCGAT
GTCATCTTCGCCGATGTTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCT
GAACGCCCACATGTTCCTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCA
AGGCCAACTGTATCGACAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGT
GAAGTCCAGAAGATGAGAGAGGAGCGGATCAAGCCCAGGGAACAGCTGAC
CCTGGAGCCTTTCGAACGTGACCACTGTATAGTGTCTGGTATCTACAAGC
GCTCTGCATGAGCGGTCTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCC
GTGGTGCTCCCCGCGGTGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCT
CGCGGCGGTGGTCGCGGCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGT
CATCATTATGGCATTCGGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCC
GTGGTGCTCCTCGTGGAGGTGGTGGCGGCCGTGGTGGTAGAGGAACCCCA
CCGTCACGCTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGATTTGCTCG
TCACCAAGAACCTTACTCCCGGAGAGGCCGTCTACGGTGAGAAGCGCATC
TCTGTTGAGTCCCCCGCTGAGGAGGATGGCACTGTGACCAAGACCGAATA
CCGTGTCTGGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTATCCTGGGTG
GTCTGGATGACATCTACATGCGCCCTGGCTCCAAGGTCCTGTATCTCGGT
TCCGCCAGCGGTACCTCCGTCAGTCACGTTGCCGATATCGTCGGACCTAC
TGGTAACGTCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCGTGACTTGA
TCGGCATGGCTACCCACCGCACCAACGTTATCCCCATCGTCGAGGACGCC
AGACACCCTCTTCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTT
CGCCGATGTTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCTGAACGCCC
ACATGTTCCTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCAAGGCCAAC
TGTATCGACAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGTGAAGTCCA
GAAGATGAGAGAGGAGCGGATCAAGCCCAGGGAACAGCTGACCCTGGAGC
CTTTCGAACGTGACCACTGTATAGTGTCTGGTATCTACAAGCGCTCTGCA
TGAGCGGTCTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCCGTGGTGCT
CCCCGCGGTGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCTCGCGGCGG
TGGTCGCGGCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGTCATCATTA
TGGCATTCGGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCCGTGGTGCT
CCTCGTGGAGGTGGTGGCGGCCGTGGTGGTAGAGGAACCCCACCGTCACG
CTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGATTTGCTCGTCACCAAG
AACCTTACTCCCGGAGAGGCCGTCTACGGTGAGAAGCGCATCTCTGTTGA
GTCCCCCGCTGAGGAGGATGGCACTGTGACCAAGACCGAATACCGTGTCT
GGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTATCCTGGGTGGTCTGGAT
GACATCTACATGCGCCCTGGCTCCAAGGTCCTGTATCTCGGTTCCGCCAG
CGGTACCTCCGTCAGTCACGTTGCCGATATCGTCGGACCTACTGGTAACG
TCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCGTGACTTGATCGGCATG
GCTACCCACCGCACCAACGTTATCCCCATCGTCGAGGACGCCAGACACCC
TCTTCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTTCGCCGATG
TTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCTGAACGCCCACATGTTC
CTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCAAGGCCAACTGTATCGA
CAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGTGAAGTCCAGAAGATGA
GAGAGGAGCGGATCAAGCCCAGGGAACAGCTGACCCTGGAGCCTTTCGAA
CGTGACCACTGTATAGTGTCTGGTATCTACAAGCGCTCTGCATGAGCGGT
CTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCCGTGGTGCTCCCCGCGG
TGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCTCGCGGCGGTGGTCGCG
GCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGTCATCATTATGGCATTC
GGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCCGTGGTGCTCCTCGTGG
AGGTGGTGGCGGCCGTGGTGGTAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0008168methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP1KJC3_010936Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010936-T1KJC3_010936-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010936-T1.cdsKJC3_010936-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010936-T1.utr3p1KJC3_010936-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010936-T1.exon3KJC3_010936-T1.exon3Aspergillus niger KJC3exon
KJC3_010936-T1.exon2KJC3_010936-T1.exon2Aspergillus niger KJC3exon
KJC3_010936-T1.exon1KJC3_010936-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010936-T1.utr5p1KJC3_010936-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092648VW
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR000692
DBxrefPFAM:PF01269
ProductSmall subunit processome complex component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4726533..4728281 -
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