|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4758573..4761897- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010948-T2 ID=KJC3_010948-T2|Name=KJC3_010948-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3325bp|location=Sequence derived from alignment at ch7:4758573..4761897- (Aspergillus niger KJC3)
CGCCCTTGGTTCGGATGCTGCCTTGCGGTCTTACTGCCTTGTCACCATCC
ATGGCATGAGATCTTCGTCCGTTCCTGTCTCCGGACGTATCTTCTCAATT
GTTTCGGCTGTTCCCACCGTCTAACGCTCGAAAGGGGGCCCGATCTCGCC
ATCTCAGCCGTCCTTGGCTGTTGCGGAACATTTACCCTGCCATCAGCGAA
CATCGCCTCGACACCGTCTCTGAGGGCATCTCGGGTTGTCGAGCTAGTCT
GCGGGTCTTCTCCGTTGAGGAATGTGGTTTCCTCTAGATATTTTAGGTCG
TCCGATATTTCTTGACTCAATGGACATACCTGTCCGTTGATCCGCGCCCA
ACTGTGGATAACGAATCTATCATGGCTACCACGGGAAAGTCTGCGACGCT
GGAAGACGCCCGTCGTGGTACGGGGTCTCCGAAAATGAAGGGACGAGGTT
AGTCGGATTATGATTCAAATGCCGGCTCGGGGCAACGAAATATGATTCAA
TGCTCCCGTCGGCCTTTGCTTCTTTCGGCTGTATCAGCTAACATGTTCGT
CATCCTGACCTTACAGAGAACGCCAAAGATACGCTGTGTCGCAATGTGAC
CATTTATGGCCGATGTCGCTACGAAGATAAAGGTGCTTAGCCATTCCTTG
CCTATTGTCCCACTTCATGCTCGCTAGGATCCGTCTAACCGTCCGATTGC
TTGTGAAGGGTGCGCCTTCAACCACGACCCGCATAAAGTGAATTCAGGAT
ATCAATCAGACAGGTTGGCACTTCCGGGAGAGGCGCGCAATGTTGGAGTC
AGAGAGGAAGATGACTTACCCATTTGGCAGTAATAAGAAACGTCTGAACG
TCGACTCCCCCAGCTTTACCCCATCCATATTGTCGTCGAATGGATCATCG
CCCACTTCCCAATCAGCGACCATGAAAAAAATGGCTACGATTTCGCCCAA
GGCTGCGAGCGCAGCTCCCTTTCAACCTAGAAGTATATCATCACGTATGC
CCTAACGGTTTCCGGGATGCGAAGCGGAATCTGACTACAATCAGGATCCA
ACTCCAGCACCCCTACTACTCGCCCGGGTACGATGACTCCCGATTGGTCT
GTGGCAGAGGTACAAGAGTTTGTGCCTCAGGGCTTTGATACTGCACATAT
AGTAAGGCTGCCAGATTGAGGTGCTCCAGGCAGGTTGACTGCTTCTGCAT
GTCATCTGTTGTGGTGACCTTGCTCGAAGTGTACTTGCTTGCAATACTAA
TTGGAATAGGGCTCCCTGCAAGGTAACGGGACTGCCGGTGTTCCTAGCAC
GAGCGCTTTCGACCCATTTGTGACCGCCCCGAATCCTCTCTCCGCAGCAA
ACGCCGTCGGCCCGGTGCAGGCCAATCCTTTCTCGCATGACACTGCTGCA
GCGCTGAACGGAGCAGCGTTCTTCGCCAACCAGTCTGGATTCCAGCAGCC
AGTAAGCCACTTCTTATCTGTGGTACATAACAAATCTTAACCAAGTGTCA
GGTCCAATATCACATGTATGCCCCGATCGGGCCTCACAGTCAGAATACGT
TGGGCTATCAGCGAAACGTACACGACCTTTTCCTCCCTAATGACCTACGG
GAGGAAATGCAGAAGAAGGCGGCAGCCACGCTCCAGACACTACCAAGTAC
GTTGCCGACATATAAGTACGTTTTGCTAATAATGCTGACTTGAGACTAGA
TACTCAGCTACCGGCTCAGGTTGATTACTTTCACTCTCTTGTCCCGCTCG
ATCTCAACCATCAGAAGAATGCTACCATCTTTGGCTTTCCCAGCTGGGTG
TACAAAGCTCAGTCTAGTAAGGACGGGAACTTTTACGCTCTCCGGAGACT
CGAGGGTACTTTAATCCTTTTCATACCATTATCTGGATACTAACGTCTGC
AGGTTTCCGGTTGACGAACGAAAAGGCCATTCGCTCCGTGCAAGCTTGGA
AGCGTGTATGCAACGGTAGTGTCGTGACAGTCCACGATGCGTTTACTAGC
CGAAGCTTTCAGGACAGCTCATTGATCTTCGTCACCGACTATCACCCACT
GTCGAAGACGCTGGCTGAGCAGCATCTCGGCGCCGGAAACCGGTTCCAGG
GTCGCCATAACACACACATCCCGGAACAGGTTCTCTGGGGTTACATGACT
CAGATTGCCAATGCTCTAAAAGCGATTCATGCCAGCCAATTGGCTGCCAG
GATCATTGACCCAAGCAAGATCCTCTTGACTGGGCGGAACCGCATTCGTC
TCAACGCCTGCGCCATCATGGATGTGGTCCAATTCGACACTCAGCGATCT
CTGGCCGAACTCCAGCGGCAAGATCTGGTCAACTTTGGACAGCTCATCGT
CACTTTGGGCGCCAACCAGCCCAATGTTATGCACAACCCTACCAAGGCCA
TGGAACACTTCACACGCGCATACACTGCGCAGCTGAAGAACTCGGTCTTC
TGGCTGCTAAACGGGCTCCAGAAAGACCAGGAGAGAAACATTGACATTTT
TATCACCGGCATCTCATCGACACTGATGTCGACCTTCGACTCTGCCCTTC
ACCTAGACGACCAATTGACCTCCGATCTGAGTCGCGAACTCGAGAACGGC
CGCCTCGTCCGGCTCATGACGAAGCTGAACTTTGTTAACGAGCGACCCGA
GTACGAGCATGATCGACAATGGTCCGAGAACGGCGAGCGGTACTTCTTGA
AGATCTTCCGCGATTACGTCTTCCACCAGGTGGACGCGCAGGGCGACCCC
GTCGTCGACCTGGGCCATGTGCTCATGTGCCTGAACAAGCTGGACGCAGG
CACGGACGAGAAAATCACCTTGATCAGCCGCGACGAGCAGAGTTGCTTCG
TGGTCAGCTATAAGGAGCTGAAGAAAGCTCTGGAATCGTCCTTCCAGGCG
CTGCTGAAGCCTTCGGCTAGTAGGAGGCTGCATTGAGTAGTCTGAGTTGG
ACACCTCTGCACTGTAAGGTGCTACATACATATATCCTTATGTGGTATGT
TATGAGTGTGTGTCATAAGCTCCGGCTGGGCTATTCTTACATGACAGATG
GATGGATGGGAGGGTGGATATTCTTGGATTTGACTCATGGTGGAGGGGAA
TATGTTTCCTATGTTCCAGCGAGGATATGATATGTCTACATTGACTATTT
TGACTGCCGAAGATATCATTAACTGCTCACACTATCGATTATAGTGATAT
TGATGGGTGGATGATGGATCACGGGCACGTTTATACAGCGGTGACGAAGA
AGAATATTAAGACAGATACGCCATAGTTAGAAATGTATGAGATTGAAGTT
CACATTCCAGCTTATCATTCCAATA back to topCoding sequence (CDS) from alignment at ch7:4758573..4761897- >KJC3_010948-T2 ID=KJC3_010948-T2|Name=KJC3_010948-T2|organism=Aspergillus niger KJC3|type=CDS|length=11034bp|location=Sequence derived from alignment at ch7:4758573..4761897- (Aspergillus niger KJC3)
GTTTCCGGTTGACGAACGAAAAGGCCATTCGCTCCGTGCAAGCTTGGAAG
CGTGTATGCAACGGTAGTGTCGTGACAGTCCACGATGCGTTTACTAGCCG
AAGCTTTCAGGACAGCTCATTGATCTTCGTCACCGACTATCACCCACTGT
CGAAGACGCTGGCTGAGCAGCATCTCGGCGCCGGAAACCGGTTCCAGGGT
CGCCATAACACACACATCCCGGAACAGGTTCTCTGGGGTTACATGACTCA
GATTGCCAATGCTCTAAAAGCGATTCATGCCAGCCAATTGGCTGCCAGGA
TCATTGACCCAAGCAAGATCCTCTTGACTGGGCGGAACCGCATTCGTCTC
AACGCCTGCGCCATCATGGATGTGGTCCAATTCGACACTCAGCGATCTCT
GGCCGAACTCCAGCGGCAAGATCTGGTCAACTTTGGACAGCTCATCGTCA
CTTTGGGCGCCAACCAGCCCAATGTTATGCACAACCCTACCAAGGCCATG
GAACACTTCACACGCGCATACACTGCGCAGCTGAAGAACTCGGTCTTCTG
GCTGCTAAACGGGCTCCAGAAAGACCAGGAGAGAAACATTGACATTTTTA
TCACCGGCATCTCATCGACACTGATGTCGACCTTCGACTCTGCCCTTCAC
CTAGACGACCAATTGACCTCCGATCTGAGTCGCGAACTCGAGAACGGCCG
CCTCGTCCGGCTCATGACGAAGCTGAACTTTGTTAACGAGCGACCCGAGT
ACGAGCATGATCGACAATGGTCCGAGAACGGCGAGCGGTACTTCTTGAAG
ATCTTCCGCGATTACGTCTTCCACCAGGTGGACGCGCAGGGCGACCCCGT
CGTCGACCTGGGCCATGTGCTCATGTGCCTGAACAAGCTGGACGCAGGCA
CGGACGAGAAAATCACCTTGATCAGCCGCGACGAGCAGAGTTGCTTCGTG
GTCAGCTATAAGGAGCTGAAGAAAGCTCTGGAATCGTCCTTCCAGGCGCT
GCTGAAGCCTTCGGCTAGTAGGAGGCTGCATTGAATACTCAGCTACCGGC
TCAGGTTGATTACTTTCACTCTCTTGTCCCGCTCGATCTCAACCATCAGA
AGAATGCTACCATCTTTGGCTTTCCCAGCTGGGTGTACAAAGCTCAGTCT
AGTAAGGACGGGAACTTTTACGCTCTCCGGAGACTCGAGGGTCCAATATC
ACATGTATGCCCCGATCGGGCCTCACAGTCAGAATACGTTGGGCTATCAG
CGAAACGTACACGACCTTTTCCTCCCTAATGACCTACGGGAGGAAATGCA
GAAGAAGGCGGCAGCCACGCTCCAGACACTACCAAGGCTCCCTGCAAGGT
AACGGGACTGCCGGTGTTCCTAGCACGAGCGCTTTCGACCCATTTGTGAC
CGCCCCGAATCCTCTCTCCGCAGCAAACGCCGTCGGCCCGGTGCAGGCCA
ATCCTTTCTCGCATGACACTGCTGCAGCGCTGAACGGAGCAGCGTTCTTC
GCCAACCAGTCTGGATTCCAGCAGCCAGATCCAACTCCAGCACCCCTACT
ACTCGCCCGGGTACGATGACTCCCGATTGGTCTGTGGCAGAGGTACAAGA
GTTTGTGCCTCAGGGCTTTGATACTGCACATATAATGTTGGAGTCAGAGA
GGAAGATGACTTACCCATTTGGCAGTAATAAGAAACGTCTGAACGTCGAC
TCCCCCAGCTTTACCCCATCCATATTGTCGTCGAATGGATCATCGCCCAC
TTCCCAATCAGCGACCATGAAAAAAATGGCTACGATTTCGCCCAAGGCTG
CGAGCGCAGCTCCCTTTCAACCTAGAAGTATATCATCACGTTTCCGGTTG
ACGAACGAAAAGGCCATTCGCTCCGTGCAAGCTTGGAAGCGTGTATGCAA
CGGTAGTGTCGTGACAGTCCACGATGCGTTTACTAGCCGAAGCTTTCAGG
ACAGCTCATTGATCTTCGTCACCGACTATCACCCACTGTCGAAGACGCTG
GCTGAGCAGCATCTCGGCGCCGGAAACCGGTTCCAGGGTCGCCATAACAC
ACACATCCCGGAACAGGTTCTCTGGGGTTACATGACTCAGATTGCCAATG
CTCTAAAAGCGATTCATGCCAGCCAATTGGCTGCCAGGATCATTGACCCA
AGCAAGATCCTCTTGACTGGGCGGAACCGCATTCGTCTCAACGCCTGCGC
CATCATGGATGTGGTCCAATTCGACACTCAGCGATCTCTGGCCGAACTCC
AGCGGCAAGATCTGGTCAACTTTGGACAGCTCATCGTCACTTTGGGCGCC
AACCAGCCCAATGTTATGCACAACCCTACCAAGGCCATGGAACACTTCAC
ACGCGCATACACTGCGCAGCTGAAGAACTCGGTCTTCTGGCTGCTAAACG
GGCTCCAGAAAGACCAGGAGAGAAACATTGACATTTTTATCACCGGCATC
TCATCGACACTGATGTCGACCTTCGACTCTGCCCTTCACCTAGACGACCA
ATTGACCTCCGATCTGAGTCGCGAACTCGAGAACGGCCGCCTCGTCCGGC
TCATGACGAAGCTGAACTTTGTTAACGAGCGACCCGAGTACGAGCATGAT
CGACAATGGTCCGAGAACGGCGAGCGGTACTTCTTGAAGATCTTCCGCGA
TTACGTCTTCCACCAGGTGGACGCGCAGGGCGACCCCGTCGTCGACCTGG
GCCATGTGCTCATGTGCCTGAACAAGCTGGACGCAGGCACGGACGAGAAA
ATCACCTTGATCAGCCGCGACGAGCAGAGTTGCTTCGTGGTCAGCTATAA
GGAGCTGAAGAAAGCTCTGGAATCGTCCTTCCAGGCGCTGCTGAAGCCTT
CGGCTAGTAGGAGGCTGCATTGAATACTCAGCTACCGGCTCAGGTTGATT
ACTTTCACTCTCTTGTCCCGCTCGATCTCAACCATCAGAAGAATGCTACC
ATCTTTGGCTTTCCCAGCTGGGTGTACAAAGCTCAGTCTAGTAAGGACGG
GAACTTTTACGCTCTCCGGAGACTCGAGGGTCCAATATCACATGTATGCC
CCGATCGGGCCTCACAGTCAGAATACGTTGGGCTATCAGCGAAACGTACA
CGACCTTTTCCTCCCTAATGACCTACGGGAGGAAATGCAGAAGAAGGCGG
CAGCCACGCTCCAGACACTACCAAGGCTCCCTGCAAGGTAACGGGACTGC
CGGTGTTCCTAGCACGAGCGCTTTCGACCCATTTGTGACCGCCCCGAATC
CTCTCTCCGCAGCAAACGCCGTCGGCCCGGTGCAGGCCAATCCTTTCTCG
CATGACACTGCTGCAGCGCTGAACGGAGCAGCGTTCTTCGCCAACCAGTC
TGGATTCCAGCAGCCAGATCCAACTCCAGCACCCCTACTACTCGCCCGGG
TACGATGACTCCCGATTGGTCTGTGGCAGAGGTACAAGAGTTTGTGCCTC
AGGGCTTTGATACTGCACATATAATGTTGGAGTCAGAGAGGAAGATGACT
TACCCATTTGGCAGTAATAAGAAACGTCTGAACGTCGACTCCCCCAGCTT
TACCCCATCCATATTGTCGTCGAATGGATCATCGCCCACTTCCCAATCAG
CGACCATGAAAAAAATGGCTACGATTTCGCCCAAGGCTGCGAGCGCAGCT
CCCTTTCAACCTAGAAGTATATCATCACGTTTCCGGTTGACGAACGAAAA
GGCCATTCGCTCCGTGCAAGCTTGGAAGCGTGTATGCAACGGTAGTGTCG
TGACAGTCCACGATGCGTTTACTAGCCGAAGCTTTCAGGACAGCTCATTG
ATCTTCGTCACCGACTATCACCCACTGTCGAAGACGCTGGCTGAGCAGCA
TCTCGGCGCCGGAAACCGGTTCCAGGGTCGCCATAACACACACATCCCGG
AACAGGTTCTCTGGGGTTACATGACTCAGATTGCCAATGCTCTAAAAGCG
ATTCATGCCAGCCAATTGGCTGCCAGGATCATTGACCCAAGCAAGATCCT
CTTGACTGGGCGGAACCGCATTCGTCTCAACGCCTGCGCCATCATGGATG
TGGTCCAATTCGACACTCAGCGATCTCTGGCCGAACTCCAGCGGCAAGAT
CTGGTCAACTTTGGACAGCTCATCGTCACTTTGGGCGCCAACCAGCCCAA
TGTTATGCACAACCCTACCAAGGCCATGGAACACTTCACACGCGCATACA
CTGCGCAGCTGAAGAACTCGGTCTTCTGGCTGCTAAACGGGCTCCAGAAA
GACCAGGAGAGAAACATTGACATTTTTATCACCGGCATCTCATCGACACT
GATGTCGACCTTCGACTCTGCCCTTCACCTAGACGACCAATTGACCTCCG
ATCTGAGTCGCGAACTCGAGAACGGCCGCCTCGTCCGGCTCATGACGAAG
CTGAACTTTGTTAACGAGCGACCCGAGTACGAGCATGATCGACAATGGTC
CGAGAACGGCGAGCGGTACTTCTTGAAGATCTTCCGCGATTACGTCTTCC
ACCAGGTGGACGCGCAGGGCGACCCCGTCGTCGACCTGGGCCATGTGCTC
ATGTGCCTGAACAAGCTGGACGCAGGCACGGACGAGAAAATCACCTTGAT
CAGCCGCGACGAGCAGAGTTGCTTCGTGGTCAGCTATAAGGAGCTGAAGA
AAGCTCTGGAATCGTCCTTCCAGGCGCTGCTGAAGCCTTCGGCTAGTAGG
AGGCTGCATTGAATACTCAGCTACCGGCTCAGGTTGATTACTTTCACTCT
CTTGTCCCGCTCGATCTCAACCATCAGAAGAATGCTACCATCTTTGGCTT
TCCCAGCTGGGTGTACAAAGCTCAGTCTAGTAAGGACGGGAACTTTTACG
CTCTCCGGAGACTCGAGGGTCCAATATCACATGTATGCCCCGATCGGGCC
TCACAGTCAGAATACGTTGGGCTATCAGCGAAACGTACACGACCTTTTCC
TCCCTAATGACCTACGGGAGGAAATGCAGAAGAAGGCGGCAGCCACGCTC
CAGACACTACCAAGGCTCCCTGCAAGGTAACGGGACTGCCGGTGTTCCTA
GCACGAGCGCTTTCGACCCATTTGTGACCGCCCCGAATCCTCTCTCCGCA
GCAAACGCCGTCGGCCCGGTGCAGGCCAATCCTTTCTCGCATGACACTGC
TGCAGCGCTGAACGGAGCAGCGTTCTTCGCCAACCAGTCTGGATTCCAGC
AGCCAGATCCAACTCCAGCACCCCTACTACTCGCCCGGGTACGATGACTC
CCGATTGGTCTGTGGCAGAGGTACAAGAGTTTGTGCCTCAGGGCTTTGAT
ACTGCACATATAATGTTGGAGTCAGAGAGGAAGATGACTTACCCATTTGG
CAGTAATAAGAAACGTCTGAACGTCGACTCCCCCAGCTTTACCCCATCCA
TATTGTCGTCGAATGGATCATCGCCCACTTCCCAATCAGCGACCATGAAA
AAAATGGCTACGATTTCGCCCAAGGCTGCGAGCGCAGCTCCCTTTCAACC
TAGAAGTATATCATCACGTTTCCGGTTGACGAACGAAAAGGCCATTCGCT
CCGTGCAAGCTTGGAAGCGTGTATGCAACGGTAGTGTCGTGACAGTCCAC
GATGCGTTTACTAGCCGAAGCTTTCAGGACAGCTCATTGATCTTCGTCAC
CGACTATCACCCACTGTCGAAGACGCTGGCTGAGCAGCATCTCGGCGCCG
GAAACCGGTTCCAGGGTCGCCATAACACACACATCCCGGAACAGGTTCTC
TGGGGTTACATGACTCAGATTGCCAATGCTCTAAAAGCGATTCATGCCAG
CCAATTGGCTGCCAGGATCATTGACCCAAGCAAGATCCTCTTGACTGGGC
GGAACCGCATTCGTCTCAACGCCTGCGCCATCATGGATGTGGTCCAATTC
GACACTCAGCGATCTCTGGCCGAACTCCAGCGGCAAGATCTGGTCAACTT
TGGACAGCTCATCGTCACTTTGGGCGCCAACCAGCCCAATGTTATGCACA
ACCCTACCAAGGCCATGGAACACTTCACACGCGCATACACTGCGCAGCTG
AAGAACTCGGTCTTCTGGCTGCTAAACGGGCTCCAGAAAGACCAGGAGAG
AAACATTGACATTTTTATCACCGGCATCTCATCGACACTGATGTCGACCT
TCGACTCTGCCCTTCACCTAGACGACCAATTGACCTCCGATCTGAGTCGC
GAACTCGAGAACGGCCGCCTCGTCCGGCTCATGACGAAGCTGAACTTTGT
TAACGAGCGACCCGAGTACGAGCATGATCGACAATGGTCCGAGAACGGCG
AGCGGTACTTCTTGAAGATCTTCCGCGATTACGTCTTCCACCAGGTGGAC
GCGCAGGGCGACCCCGTCGTCGACCTGGGCCATGTGCTCATGTGCCTGAA
CAAGCTGGACGCAGGCACGGACGAGAAAATCACCTTGATCAGCCGCGACG
AGCAGAGTTGCTTCGTGGTCAGCTATAAGGAGCTGAAGAAAGCTCTGGAA
TCGTCCTTCCAGGCGCTGCTGAAGCCTTCGGCTAGTAGGAGGCTGCATTG
AATACTCAGCTACCGGCTCAGGTTGATTACTTTCACTCTCTTGTCCCGCT
CGATCTCAACCATCAGAAGAATGCTACCATCTTTGGCTTTCCCAGCTGGG
TGTACAAAGCTCAGTCTAGTAAGGACGGGAACTTTTACGCTCTCCGGAGA
CTCGAGGGTCCAATATCACATGTATGCCCCGATCGGGCCTCACAGTCAGA
ATACGTTGGGCTATCAGCGAAACGTACACGACCTTTTCCTCCCTAATGAC
CTACGGGAGGAAATGCAGAAGAAGGCGGCAGCCACGCTCCAGACACTACC
AAGGCTCCCTGCAAGGTAACGGGACTGCCGGTGTTCCTAGCACGAGCGCT
TTCGACCCATTTGTGACCGCCCCGAATCCTCTCTCCGCAGCAAACGCCGT
CGGCCCGGTGCAGGCCAATCCTTTCTCGCATGACACTGCTGCAGCGCTGA
ACGGAGCAGCGTTCTTCGCCAACCAGTCTGGATTCCAGCAGCCAGATCCA
ACTCCAGCACCCCTACTACTCGCCCGGGTACGATGACTCCCGATTGGTCT
GTGGCAGAGGTACAAGAGTTTGTGCCTCAGGGCTTTGATACTGCACATAT
AATGTTGGAGTCAGAGAGGAAGATGACTTACCCATTTGGCAGTAATAAGA
AACGTCTGAACGTCGACTCCCCCAGCTTTACCCCATCCATATTGTCGTCG
AATGGATCATCGCCCACTTCCCAATCAGCGACCATGAAAAAAATGGCTAC
GATTTCGCCCAAGGCTGCGAGCGCAGCTCCCTTTCAACCTAGAAGTATAT
CATCACGTTTCCGGTTGACGAACGAAAAGGCCATTCGCTCCGTGCAAGCT
TGGAAGCGTGTATGCAACGGTAGTGTCGTGACAGTCCACGATGCGTTTAC
TAGCCGAAGCTTTCAGGACAGCTCATTGATCTTCGTCACCGACTATCACC
CACTGTCGAAGACGCTGGCTGAGCAGCATCTCGGCGCCGGAAACCGGTTC
CAGGGTCGCCATAACACACACATCCCGGAACAGGTTCTCTGGGGTTACAT
GACTCAGATTGCCAATGCTCTAAAAGCGATTCATGCCAGCCAATTGGCTG
CCAGGATCATTGACCCAAGCAAGATCCTCTTGACTGGGCGGAACCGCATT
CGTCTCAACGCCTGCGCCATCATGGATGTGGTCCAATTCGACACTCAGCG
ATCTCTGGCCGAACTCCAGCGGCAAGATCTGGTCAACTTTGGACAGCTCA
TCGTCACTTTGGGCGCCAACCAGCCCAATGTTATGCACAACCCTACCAAG
GCCATGGAACACTTCACACGCGCATACACTGCGCAGCTGAAGAACTCGGT
CTTCTGGCTGCTAAACGGGCTCCAGAAAGACCAGGAGAGAAACATTGACA
TTTTTATCACCGGCATCTCATCGACACTGATGTCGACCTTCGACTCTGCC
CTTCACCTAGACGACCAATTGACCTCCGATCTGAGTCGCGAACTCGAGAA
CGGCCGCCTCGTCCGGCTCATGACGAAGCTGAACTTTGTTAACGAGCGAC
CCGAGTACGAGCATGATCGACAATGGTCCGAGAACGGCGAGCGGTACTTC
TTGAAGATCTTCCGCGATTACGTCTTCCACCAGGTGGACGCGCAGGGCGA
CCCCGTCGTCGACCTGGGCCATGTGCTCATGTGCCTGAACAAGCTGGACG
CAGGCACGGACGAGAAAATCACCTTGATCAGCCGCGACGAGCAGAGTTGC
TTCGTGGTCAGCTATAAGGAGCTGAAGAAAGCTCTGGAATCGTCCTTCCA
GGCGCTGCTGAAGCCTTCGGCTAGTAGGAGGCTGCATTGAATACTCAGCT
ACCGGCTCAGGTTGATTACTTTCACTCTCTTGTCCCGCTCGATCTCAACC
ATCAGAAGAATGCTACCATCTTTGGCTTTCCCAGCTGGGTGTACAAAGCT
CAGTCTAGTAAGGACGGGAACTTTTACGCTCTCCGGAGACTCGAGGGTCC
AATATCACATGTATGCCCCGATCGGGCCTCACAGTCAGAATACGTTGGGC
TATCAGCGAAACGTACACGACCTTTTCCTCCCTAATGACCTACGGGAGGA
AATGCAGAAGAAGGCGGCAGCCACGCTCCAGACACTACCAAGGCTCCCTG
CAAGGTAACGGGACTGCCGGTGTTCCTAGCACGAGCGCTTTCGACCCATT
TGTGACCGCCCCGAATCCTCTCTCCGCAGCAAACGCCGTCGGCCCGGTGC
AGGCCAATCCTTTCTCGCATGACACTGCTGCAGCGCTGAACGGAGCAGCG
TTCTTCGCCAACCAGTCTGGATTCCAGCAGCCAGATCCAACTCCAGCACC
CCTACTACTCGCCCGGGTACGATGACTCCCGATTGGTCTGTGGCAGAGGT
ACAAGAGTTTGTGCCTCAGGGCTTTGATACTGCACATATAATGTTGGAGT
CAGAGAGGAAGATGACTTACCCATTTGGCAGTAATAAGAAACGTCTGAAC
GTCGACTCCCCCAGCTTTACCCCATCCATATTGTCGTCGAATGGATCATC
GCCCACTTCCCAATCAGCGACCATGAAAAAAATGGCTACGATTTCGCCCA
AGGCTGCGAGCGCAGCTCCCTTTCAACCTAGAAGTATATCATCACGTTTC
CGGTTGACGAACGAAAAGGCCATTCGCTCCGTGCAAGCTTGGAAGCGTGT
ATGCAACGGTAGTGTCGTGACAGTCCACGATGCGTTTACTAGCCGAAGCT
TTCAGGACAGCTCATTGATCTTCGTCACCGACTATCACCCACTGTCGAAG
ACGCTGGCTGAGCAGCATCTCGGCGCCGGAAACCGGTTCCAGGGTCGCCA
TAACACACACATCCCGGAACAGGTTCTCTGGGGTTACATGACTCAGATTG
CCAATGCTCTAAAAGCGATTCATGCCAGCCAATTGGCTGCCAGGATCATT
GACCCAAGCAAGATCCTCTTGACTGGGCGGAACCGCATTCGTCTCAACGC
CTGCGCCATCATGGATGTGGTCCAATTCGACACTCAGCGATCTCTGGCCG
AACTCCAGCGGCAAGATCTGGTCAACTTTGGACAGCTCATCGTCACTTTG
GGCGCCAACCAGCCCAATGTTATGCACAACCCTACCAAGGCCATGGAACA
CTTCACACGCGCATACACTGCGCAGCTGAAGAACTCGGTCTTCTGGCTGC
TAAACGGGCTCCAGAAAGACCAGGAGAGAAACATTGACATTTTTATCACC
GGCATCTCATCGACACTGATGTCGACCTTCGACTCTGCCCTTCACCTAGA
CGACCAATTGACCTCCGATCTGAGTCGCGAACTCGAGAACGGCCGCCTCG
TCCGGCTCATGACGAAGCTGAACTTTGTTAACGAGCGACCCGAGTACGAG
CATGATCGACAATGGTCCGAGAACGGCGAGCGGTACTTCTTGAAGATCTT
CCGCGATTACGTCTTCCACCAGGTGGACGCGCAGGGCGACCCCGTCGTCG
ACCTGGGCCATGTGCTCATGTGCCTGAACAAGCTGGACGCAGGCACGGAC
GAGAAAATCACCTTGATCAGCCGCGACGAGCAGAGTTGCTTCGTGGTCAG
CTATAAGGAGCTGAAGAAAGCTCTGGAATCGTCCTTCCAGGCGCTGCTGA
AGCCTTCGGCTAGTAGGAGGCTGCATTGAATACTCAGCTACCGGCTCAGG
TTGATTACTTTCACTCTCTTGTCCCGCTCGATCTCAACCATCAGAAGAAT
GCTACCATCTTTGGCTTTCCCAGCTGGGTGTACAAAGCTCAGTCTAGTAA
GGACGGGAACTTTTACGCTCTCCGGAGACTCGAGGGTCCAATATCACATG
TATGCCCCGATCGGGCCTCACAGTCAGAATACGTTGGGCTATCAGCGAAA
CGTACACGACCTTTTCCTCCCTAATGACCTACGGGAGGAAATGCAGAAGA
AGGCGGCAGCCACGCTCCAGACACTACCAAGGCTCCCTGCAAGGTAACGG
GACTGCCGGTGTTCCTAGCACGAGCGCTTTCGACCCATTTGTGACCGCCC
CGAATCCTCTCTCCGCAGCAAACGCCGTCGGCCCGGTGCAGGCCAATCCT
TTCTCGCATGACACTGCTGCAGCGCTGAACGGAGCAGCGTTCTTCGCCAA
CCAGTCTGGATTCCAGCAGCCAGATCCAACTCCAGCACCCCTACTACTCG
CCCGGGTACGATGACTCCCGATTGGTCTGTGGCAGAGGTACAAGAGTTTG
TGCCTCAGGGCTTTGATACTGCACATATAATGTTGGAGTCAGAGAGGAAG
ATGACTTACCCATTTGGCAGTAATAAGAAACGTCTGAACGTCGACTCCCC
CAGCTTTACCCCATCCATATTGTCGTCGAATGGATCATCGCCCACTTCCC
AATCAGCGACCATGAAAAAAATGGCTACGATTTCGCCCAAGGCTGCGAGC
GCAGCTCCCTTTCAACCTAGAAGTATATCATCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0031251 | PAN complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
| GO:0006397 | mRNA processing |
| GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0004672 | protein kinase activity |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010948-T2.utr3p1 | KJC3_010948-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261Q5L |
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR000719 |
| DBxref | InterPro:IPR030844 |
| DBxref | InterPro:IPR041332 |
| DBxref | PFAM:PF18101 |
| Product | variant 2 |
| Product | PAB-dependent poly(A)-specific ribonuclease subunit 3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4758573..4761897 - |
|
