You are here

Home

KJC3_010952-T1, KJC3_010952-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010952-T1
Unique NameKJC3_010952-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4776960..4777965-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010952-T1 ID=KJC3_010952-T1|Name=KJC3_010952-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1006bp|location=Sequence derived from alignment at ch7:4776960..4777965- (Aspergillus niger KJC3)
ATGTCGGCAGCAGTTGCGTCGCTATTTTCCCTCAGCGGCAAGACCGCCAT
CGTGACAGGAGGAACTAGGGGCATTGGGCAGGCAATGGCTTTTGCCCTTG
CAGAAGCTGGTGCCGATATCATCTTGATTCAGGTGCGCACAGCCGCGACC
TCCCCATTGGCGCCCACGGAAATGAGAGGGGAGCCATGACGAAACGTTGT
TCGGAACTAACGGTCTGCGAGCAGAGAGACGAGTCGAACACATCGACTCG
CGATGAGATCGTCAATCGCATCGGCAAGAAAGCTTGGATCCACGTGGCAG
AGTTGTCGAATCGGGAATCGATCAAGGGTGTCATTCCAGCTCTGACCAGT
CAAGGCCTCAAGCCAGAGATCCTACTCAACTGCGCCGGAATTCAACGGAG
ACACCCCAGTGAAAAGTTCCCGGACGAAGATTGGGATGAGGTAGGTGTAA
AATGACTCTCCTATTTCAGCCACCTATTTACCCCTCTCTATTTTTGGACC
TCCCCTTCTCCTGAAGTGGAGCTGAAGACTAGTATACTAACTATTGATTT
ATATAGGTTATCCAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGA
GTTCGGTGCATACTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTC
GTCGTGGAGCTATCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGT
ATCACGGTACCTGCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGAC
GAAGGCCCTCTCCAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAA
TTGCTCCTGGATACATCGCCACAGATATGAACACTGCCCTGATTAACGAT
TCCAACCGCAATGCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGG
CAAGCCAGAGGACTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGA
GTAGCTATGTCTCAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGA
CGGTGA
back to top

Coding sequence (CDS) from alignment at ch7:4776960..4777965-

>KJC3_010952-T1 ID=KJC3_010952-T1|Name=KJC3_010952-T1|organism=Aspergillus niger KJC3|type=CDS|length=2394bp|location=Sequence derived from alignment at ch7:4776960..4777965- (Aspergillus niger KJC3)
GTTATCCAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGAGTTCGG
TGCATACTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTCGTCGTG
GAGCTATCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGTATCACG
GTACCTGCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGACGAAGGC
CCTCTCCAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAATTGCTC
CTGGATACATCGCCACAGATATGAACACTGCCCTGATTAACGATTCCAAC
CGCAATGCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGGCAAGCC
AGAGGACTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGAGTAGCT
ATGTCTCAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGACGGTGA
AGAGACGAGTCGAACACATCGACTCGCGATGAGATCGTCAATCGCATCGG
CAAGAAAGCTTGGATCCACGTGGCAGAGTTGTCGAATCGGGAATCGATCA
AGGGTGTCATTCCAGCTCTGACCAGTCAAGGCCTCAAGCCAGAGATCCTA
CTCAACTGCGCCGGAATTCAACGGAGACACCCCAGTGAAAAGTTCCCGGA
CGAAGATTGGGATGAGATGTCGGCAGCAGTTGCGTCGCTATTTTCCCTCA
GCGGCAAGACCGCCATCGTGACAGGAGGAACTAGGGGCATTGGGCAGGCA
ATGGCTTTTGCCCTTGCAGAAGCTGGTGCCGATATCATCTTGATTCAGGT
TATCCAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGAGTTCGGTG
CATACTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTCGTCGTGGA
GCTATCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGTATCACGGT
ACCTGCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGACGAAGGCCC
TCTCCAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAATTGCTCCT
GGATACATCGCCACAGATATGAACACTGCCCTGATTAACGATTCCAACCG
CAATGCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGGCAAGCCAG
AGGACTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGAGTAGCTAT
GTCTCAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGACGGTGAAG
AGACGAGTCGAACACATCGACTCGCGATGAGATCGTCAATCGCATCGGCA
AGAAAGCTTGGATCCACGTGGCAGAGTTGTCGAATCGGGAATCGATCAAG
GGTGTCATTCCAGCTCTGACCAGTCAAGGCCTCAAGCCAGAGATCCTACT
CAACTGCGCCGGAATTCAACGGAGACACCCCAGTGAAAAGTTCCCGGACG
AAGATTGGGATGAGATGTCGGCAGCAGTTGCGTCGCTATTTTCCCTCAGC
GGCAAGACCGCCATCGTGACAGGAGGAACTAGGGGCATTGGGCAGGCAAT
GGCTTTTGCCCTTGCAGAAGCTGGTGCCGATATCATCTTGATTCAGGTTA
TCCAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGAGTTCGGTGCA
TACTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTCGTCGTGGAGC
TATCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGTATCACGGTAC
CTGCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGACGAAGGCCCTC
TCCAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAATTGCTCCTGG
ATACATCGCCACAGATATGAACACTGCCCTGATTAACGATTCCAACCGCA
ATGCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGGCAAGCCAGAG
GACTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGAGTAGCTATGT
CTCAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGACGGTGAAGAG
ACGAGTCGAACACATCGACTCGCGATGAGATCGTCAATCGCATCGGCAAG
AAAGCTTGGATCCACGTGGCAGAGTTGTCGAATCGGGAATCGATCAAGGG
TGTCATTCCAGCTCTGACCAGTCAAGGCCTCAAGCCAGAGATCCTACTCA
ACTGCGCCGGAATTCAACGGAGACACCCCAGTGAAAAGTTCCCGGACGAA
GATTGGGATGAGATGTCGGCAGCAGTTGCGTCGCTATTTTCCCTCAGCGG
CAAGACCGCCATCGTGACAGGAGGAACTAGGGGCATTGGGCAGGCAATGG
CTTTTGCCCTTGCAGAAGCTGGTGCCGATATCATCTTGATTCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010952KJC3_010952Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010952-T1KJC3_010952-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010952-T1.cdsKJC3_010952-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010952-T1.exon3KJC3_010952-T1.exon3Aspergillus niger KJC3exon
KJC3_010952-T1.exon2KJC3_010952-T1.exon2Aspergillus niger KJC3exon
KJC3_010952-T1.exon1KJC3_010952-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4776960..4777965 -
Powered by Drupal