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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4833593..4834621- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010969-T1 ID=KJC3_010969-T1|Name=KJC3_010969-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1029bp|location=Sequence derived from alignment at ch7:4833593..4834621- (Aspergillus niger KJC3)
AACCAAGCACTCACTCCCTCCACGAACTATACTCCCAAGGAGGAAAAGGG
TATCCGTCATGTCCTCCATGCGCAACGCCGTTCAGCGGCGCAACCACCGC
GAGCGTGGTCAGCTCGAAGGCCGTGAGAAATGGGGTATTCTCGAAAAGCA
CAAGGTACATACATACCTTCACTTTCTTGCCATAGCCCCCCATTGCCGAA
GTATTCTGCAGTACTAATAGAAATGAAATCTTAGGATTACTCCCTCCGCG
CGAAAGACTACAACACGAAGAAAGAGAAAATTAAGCGCCTCCAAGAAAAA
GTCCGCGACCGCAACCCCGATGAATTCGCCTTCGGAATGATGTCGAGTTC
GTCCGCTCGACAAGGCAAACACGGCGCTGCGGGAAACCGCGACTCGGCTG
CCGCGCGCGGTCTCAGCCACGATGCCATTAAGTTGCTCAAGACACAGGAT
GCGGGGTACCTGCGGACAGTTGGGGAGCGGATCCGACGACAGATGGAGAA
GTTGGAGGAGGAGGTGCGGTTGCAGGATGGGATGAAGGAGATCCTGGATG
GGGATGCTGGGGAGGATAAGAAGAAAGAGGAGGACGTGATGGATGACGAT
GATATGGACTTTGATTTCGATTTCGGGGATGATGAGGTGGATCAGAAGAA
GAATAAGAAGAGCAGGAAATTGGTGTTTGCGGATGATCGGAAGGAGCAGA
GGGTGTTGAGGAAGAAGAAGTTACGTGAGGAAGAAGAAGATGATGATGAT
GAGGAAGAGGATGATTCGTTCGGAAAGCAGGTGATGAAAAAGTCGAGGAA
GCAGTTGGAGGCGGAGAGACAGGCGCTTGTGGAGGCTCGTCGGGCTCGCA
AAATGAAGAAGCGTGCGGCAGAGGCGCGGATGAACAAGCTCAAGGCGCTG
CAGAAGCAGTACAAGGAGATCACGGCCGCGGAGCGCGAGCTGGATTGGCA
GCGTGGTCGGATGGATAATGTGGTGGGTGGCACGAATAAGAATGGTGTCA
AGTGGAAGATCCGTGAGCGGAAGAAGTGA back to topCoding sequence (CDS) from alignment at ch7:4833593..4834621- >KJC3_010969-T1 ID=KJC3_010969-T1|Name=KJC3_010969-T1|organism=Aspergillus niger KJC3|type=CDS|length=1782bp|location=Sequence derived from alignment at ch7:4833593..4834621- (Aspergillus niger KJC3)
GATTACTCCCTCCGCGCGAAAGACTACAACACGAAGAAAGAGAAAATTAA
GCGCCTCCAAGAAAAAGTCCGCGACCGCAACCCCGATGAATTCGCCTTCG
GAATGATGTCGAGTTCGTCCGCTCGACAAGGCAAACACGGCGCTGCGGGA
AACCGCGACTCGGCTGCCGCGCGCGGTCTCAGCCACGATGCCATTAAGTT
GCTCAAGACACAGGATGCGGGGTACCTGCGGACAGTTGGGGAGCGGATCC
GACGACAGATGGAGAAGTTGGAGGAGGAGGTGCGGTTGCAGGATGGGATG
AAGGAGATCCTGGATGGGGATGCTGGGGAGGATAAGAAGAAAGAGGAGGA
CGTGATGGATGACGATGATATGGACTTTGATTTCGATTTCGGGGATGATG
AGGTGGATCAGAAGAAGAATAAGAAGAGCAGGAAATTGGTGTTTGCGGAT
GATCGGAAGGAGCAGAGGGTGTTGAGGAAGAAGAAGTTACGTGAGGAAGA
AGAAGATGATGATGATGAGGAAGAGGATGATTCGTTCGGAAAGCAGGTGA
TGAAAAAGTCGAGGAAGCAGTTGGAGGCGGAGAGACAGGCGCTTGTGGAG
GCTCGTCGGGCTCGCAAAATGAAGAAGCGTGCGGCAGAGGCGCGGATGAA
CAAGCTCAAGGCGCTGCAGAAGCAGTACAAGGAGATCACGGCCGCGGAGC
GCGAGCTGGATTGGCAGCGTGGTCGGATGGATAATGTGGTGGGTGGCACG
AATAAGAATGGTGTCAAGTGGAAGATCCGTGAGCGGAAGAAGTGAATGTC
CTCCATGCGCAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGGTCAGC
TCGAAGGCCGTGAGAAATGGGGTATTCTCGAAAAGCACAAGGATTACTCC
CTCCGCGCGAAAGACTACAACACGAAGAAAGAGAAAATTAAGCGCCTCCA
AGAAAAAGTCCGCGACCGCAACCCCGATGAATTCGCCTTCGGAATGATGT
CGAGTTCGTCCGCTCGACAAGGCAAACACGGCGCTGCGGGAAACCGCGAC
TCGGCTGCCGCGCGCGGTCTCAGCCACGATGCCATTAAGTTGCTCAAGAC
ACAGGATGCGGGGTACCTGCGGACAGTTGGGGAGCGGATCCGACGACAGA
TGGAGAAGTTGGAGGAGGAGGTGCGGTTGCAGGATGGGATGAAGGAGATC
CTGGATGGGGATGCTGGGGAGGATAAGAAGAAAGAGGAGGACGTGATGGA
TGACGATGATATGGACTTTGATTTCGATTTCGGGGATGATGAGGTGGATC
AGAAGAAGAATAAGAAGAGCAGGAAATTGGTGTTTGCGGATGATCGGAAG
GAGCAGAGGGTGTTGAGGAAGAAGAAGTTACGTGAGGAAGAAGAAGATGA
TGATGATGAGGAAGAGGATGATTCGTTCGGAAAGCAGGTGATGAAAAAGT
CGAGGAAGCAGTTGGAGGCGGAGAGACAGGCGCTTGTGGAGGCTCGTCGG
GCTCGCAAAATGAAGAAGCGTGCGGCAGAGGCGCGGATGAACAAGCTCAA
GGCGCTGCAGAAGCAGTACAAGGAGATCACGGCCGCGGAGCGCGAGCTGG
ATTGGCAGCGTGGTCGGATGGATAATGTGGTGGGTGGCACGAATAAGAAT
GGTGTCAAGTGGAAGATCCGTGAGCGGAAGAAGTGAATGTCCTCCATGCG
CAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGGTCAGCTCGAAGGCC
GTGAGAAATGGGGTATTCTCGAAAAGCACAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0032040 | small-subunit processome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010969-T1.utr5p1 | KJC3_010969-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264CA0 |
| DBxref | InterPro:IPR007144 |
| DBxref | PFAM:PF03998 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4833593..4834621 - |
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