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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4837235..4840332- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010972-T2 ID=KJC3_010972-T2|Name=KJC3_010972-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3098bp|location=Sequence derived from alignment at ch7:4837235..4840332- (Aspergillus niger KJC3)
GGAGAGACAGACGAGCGGTTGGGCTGTTGAGCCTTCTCGCAGGTCCCAAC
AATAATAGAATCGCCATTTGCTGCTCTTCTCCCATTTCGCTGTCCTATCT
GTCTCACTTTGTTGTCTGTACGCCCTGCTGGTGCTGCAGGTTCCACTCGC
TTGTTTTCGATCGTGGTCAAATGCTTGCATGCCAGCTCATTCGCTTTGCA
AGTGACCGTCTCTCGTTAGTGATTCCACTCCGGCGCATGTCTATCGGGCA
TTGTCACATGGGCCGTATGTAGGCGGCAATTCCTGCACCTCCGCCGTCTG
ACCTCCGACCCCCCTCTCTATCTGCTGTGTTCTTTGTTTTGTGCTTCGCC
TTTGTCGCTTGGGAATTGTTACAATATTCTCCAGGGACTTTCCCTGTTAC
TCTCGCAGGATGCAGTACGTCCGAAGTATCAGCGGTTCCGTCTCCAAGAC
GTGGAACTCCATCAATCCAGCCACCTTGAGTGGGGCAATCGATGTGATTG
TGATTGAACAAGAGGATGGTTCGTGGTCTGCTTCTTTCAATTTATCGTCA
AAAGAAGGACTAATATCCGGTATAGGAACTCTGGCTTGTTCACCTTTCCA
CGTTCGATTCGGCAAATTCTCCTTGCTCCGCCCGTACGAGAAGAAGGTAC
CGTCTCCCGCATCGATCCTGACAGCGACCCCACATAACTAAAAGCGCTTT
AAGGTGGAATTTTCCGTAAATGGTGTAAAGCAAGACTATGCGATGAAGCT
GGGTGAAGGTGGGGAGGCTTTCTTTGTCTTTGAGACAACAGACGAGATCC
CCGCCTCGCTGCAGACTTCGCCCCTGGTTTCTCCAAGCAGCAGTCCCAAG
ATGCGCAGTGAGGAGAATCTTCCTCCATCGCTCCAGGAACCCGATTACCT
GGACCTCGATCGATCATCTAATGGCAATTTGGATGGGAAATCTTCAACAG
CCCTTCCTGTGCTGTCGCGGAGTATGCGGGCATCGAGCGATTTAGGTGGG
TTCTAATGCAGACCTACACTTATCGAGTTATTGACATTCATCTGCGACAG
GTACCCTTACTCCTCTTTCACGGTCGCCGGATGACTCCAGCTTGGGCAGG
TCCCGACATGGCTCGTTCGGCGATGCACCCAGCAAAATTGACCGGACGGC
TACGGATACAGTGTTGTTGACCAAGAGCCGCTCCAACAGTGTTAGCGTAG
CGGACCAAGTATACGGAATGCAGTCCTCTGGCGCCAGCGCCGCGAGCGAT
GATATGGGCCAGGATGGTCGTTCGAGAAGCCCTCCGCCATTAACTCCCGA
AGAGGCGATGTCTCGCGCCGTCTCGCTTTCGAAGAAACTCTCCGGATCGA
ATATTCCGTCTCACGTTACCGAAACGGGAGACCTCATGCTCGACATGACT
GGTTACAAGAGCAGCGAAGAGGATGCTCTGCGAGCGGAAGTTCTTGCACG
GAAGATCCTTGCCGAGGAGTTGGAGGGCCCCTATGACATCGGGGCTCTCA
TCGGGGCCGACGAACATGGGAACCTGTGGATCTACAGTAGCGAGGAAGCA
AAGGAGGCTGCCAATCGCCGAGCTACGTTCAATGCGATGCGACCGGGCTC
CGCCATGAGCGAGCATGCCATCTCCGACCCGGGGTACCACAGCGACAGTG
ACAAGTCTTTGCAGGACAAGCCGCTACCCAGCCGGCACTACCGCACCCAG
TCTGATGTCCAACCCGGCTTCCCTACCCCACCGCAGTCACCGACGCCAGA
AGCCCAAGAGCCAACTCGAAACTATGCAAAGACCCTCCGTCTCACGAGTA
ATCAGCTGAAGGCCCTGAACTTGAAGCCTGGTGCGAACAGCATGTCGTTC
AGCGTCAACCGGGCTACTTGCACGGCGACGATGTATCTATGGAATGGAAA
TATTCCTATTGTAATCTCCGATATTGACGGAACCATCACCAAGTAAGTGT
TCTTGATCTGGGACGTCGGAAGTCGCTAATGGATTGTAGGTCTGATGCTC
TTGGCCATGTGTTAAACATGATTGGGCGTGACTGGACTCATGCTGGAGTA
GCCAAATTGTATACTGACATTGTCAACAACGGGTATAACATCATGTACCT
TACAAGTCGATCCGTTGGCCAGGCAGATACGACGCGGGCTTACTTGTACG
GAGTTAATCAGGACGGCTGGCGACTGCCCAAGGGGCCGGTCATCATGAGT
CCTGATCGAACCATGGCAGCACTCCGACGAGAAATCTACCTGAGGAAGCC
TGAGGTGTTCAAGATGGCATGTCTACGGGATATCTTGAATTTGTTCAATG
GGAAAGAGAATCCCTTCTACGCCGGGTTCGGCAACCGTCTCACCGATGCG
CTGAGTTACCGGTCGGTGAACATCCCGTCCACCAGGATCTTCACGATCAA
TTCGAATGCCGAGGTCGTCCTGGACCTTCTTAGTCTAAACAAGTACAAGA
GCAGTTACGTTTCGATGACGGAGCTGCTGGACCATTTCTTCCCGCCGGTG
AGTCTGCTGGTCCAGGCTGGTGGCGAAGAATACACCGACTTCACCTATTG
GAGAGAGCCTCCTCCGGATCTGGAGGACTTTTCCTGCACAGACAGCGAAG
CAGAAGAAGGTGACCAAGAGGAGGACGAAGATGAGGAGGAGGAAGACGAG
GAGTACGACGGGGAGCTGAGTGACGAGGAAGCAAGTGATGTCGATGAGGA
TGAGGCTGGAGAAGAGCTCGGGGCGAGCTATATCTCGCAGGACTCGGTCG
ATGGATCTGAACTGATGGACAGTCTCAATCTCCATGCTGCCGATGAAGAC
ATCGAGGACGAAGATGAGGTCGCCTCGGAAGAGGAGTTGGACCCTCCTCG
TCCAAGCCAATCCAACCCTGGCTCTCCCAAACGTTGAGGGCAGCAAAGAT
GCATCAACTGCATTACGGCGGCCAACTCACAGGCCAGGGACTTGACATTT
ATTGCATGGATGAGGTGTTTGTGTTATAGATTTGCATGATGGGCGTTTGC
ACCGGTCGCATAGCCATATTGTTACTTTTGTTGGGTGGCACATAATGTAT
GATAGTTGAGACGCTGAGTTGCACAGTATAGAATTGTTGCATCACTAC back to topCoding sequence (CDS) from alignment at ch7:4837235..4840332- >KJC3_010972-T2 ID=KJC3_010972-T2|Name=KJC3_010972-T2|organism=Aspergillus niger KJC3|type=CDS|length=6129bp|location=Sequence derived from alignment at ch7:4837235..4840332- (Aspergillus niger KJC3)
GTCTGATGCTCTTGGCCATGTGTTAAACATGATTGGGCGTGACTGGACTC
ATGCTGGAGTAGCCAAATTGTATACTGACATTGTCAACAACGGGTATAAC
ATCATGTACCTTACAAGTCGATCCGTTGGCCAGGCAGATACGACGCGGGC
TTACTTGTACGGAGTTAATCAGGACGGCTGGCGACTGCCCAAGGGGCCGG
TCATCATGAGTCCTGATCGAACCATGGCAGCACTCCGACGAGAAATCTAC
CTGAGGAAGCCTGAGGTGTTCAAGATGGCATGTCTACGGGATATCTTGAA
TTTGTTCAATGGGAAAGAGAATCCCTTCTACGCCGGGTTCGGCAACCGTC
TCACCGATGCGCTGAGTTACCGGTCGGTGAACATCCCGTCCACCAGGATC
TTCACGATCAATTCGAATGCCGAGGTCGTCCTGGACCTTCTTAGTCTAAA
CAAGTACAAGAGCAGTTACGTTTCGATGACGGAGCTGCTGGACCATTTCT
TCCCGCCGGTGAGTCTGCTGGTCCAGGCTGGTGGCGAAGAATACACCGAC
TTCACCTATTGGAGAGAGCCTCCTCCGGATCTGGAGGACTTTTCCTGCAC
AGACAGCGAAGCAGAAGAAGGTGACCAAGAGGAGGACGAAGATGAGGAGG
AGGAAGACGAGGAGTACGACGGGGAGCTGAGTGACGAGGAAGCAAGTGAT
GTCGATGAGGATGAGGCTGGAGAAGAGCTCGGGGCGAGCTATATCTCGCA
GGACTCGGTCGATGGATCTGAACTGATGGACAGTCTCAATCTCCATGCTG
CCGATGAAGACATCGAGGACGAAGATGAGGTCGCCTCGGAAGAGGAGTTG
GACCCTCCTCGTCCAAGCCAATCCAACCCTGGCTCTCCCAAACGTTGAGT
ACCCTTACTCCTCTTTCACGGTCGCCGGATGACTCCAGCTTGGGCAGGTC
CCGACATGGCTCGTTCGGCGATGCACCCAGCAAAATTGACCGGACGGCTA
CGGATACAGTGTTGTTGACCAAGAGCCGCTCCAACAGTGTTAGCGTAGCG
GACCAAGTATACGGAATGCAGTCCTCTGGCGCCAGCGCCGCGAGCGATGA
TATGGGCCAGGATGGTCGTTCGAGAAGCCCTCCGCCATTAACTCCCGAAG
AGGCGATGTCTCGCGCCGTCTCGCTTTCGAAGAAACTCTCCGGATCGAAT
ATTCCGTCTCACGTTACCGAAACGGGAGACCTCATGCTCGACATGACTGG
TTACAAGAGCAGCGAAGAGGATGCTCTGCGAGCGGAAGTTCTTGCACGGA
AGATCCTTGCCGAGGAGTTGGAGGGCCCCTATGACATCGGGGCTCTCATC
GGGGCCGACGAACATGGGAACCTGTGGATCTACAGTAGCGAGGAAGCAAA
GGAGGCTGCCAATCGCCGAGCTACGTTCAATGCGATGCGACCGGGCTCCG
CCATGAGCGAGCATGCCATCTCCGACCCGGGGTACCACAGCGACAGTGAC
AAGTCTTTGCAGGACAAGCCGCTACCCAGCCGGCACTACCGCACCCAGTC
TGATGTCCAACCCGGCTTCCCTACCCCACCGCAGTCACCGACGCCAGAAG
CCCAAGAGCCAACTCGAAACTATGCAAAGACCCTCCGTCTCACGAGTAAT
CAGCTGAAGGCCCTGAACTTGAAGCCTGGTGCGAACAGCATGTCGTTCAG
CGTCAACCGGGCTACTTGCACGGCGACGATGTATCTATGGAATGGAAATA
TTCCTATTGTAATCTCCGATATTGACGGAACCATCACCAAATGAAGCTGG
GTGAAGGTGGGGAGGCTTTCTTTGTCTTTGAGACAACAGACGAGATCCCC
GCCTCGCTGCAGACTTCGCCCCTGGTTTCTCCAAGCAGCAGTCCCAAGAT
GCGCAGTGAGGAGAATCTTCCTCCATCGCTCCAGGAACCCGATTACCTGG
ACCTCGATCGATCATCTAATGGCAATTTGGATGGGAAATCTTCAACAGCC
CTTCCTGTGCTGTCGCGGAGTATGCGGGCATCGAGCGATTTAGGTCTGAT
GCTCTTGGCCATGTGTTAAACATGATTGGGCGTGACTGGACTCATGCTGG
AGTAGCCAAATTGTATACTGACATTGTCAACAACGGGTATAACATCATGT
ACCTTACAAGTCGATCCGTTGGCCAGGCAGATACGACGCGGGCTTACTTG
TACGGAGTTAATCAGGACGGCTGGCGACTGCCCAAGGGGCCGGTCATCAT
GAGTCCTGATCGAACCATGGCAGCACTCCGACGAGAAATCTACCTGAGGA
AGCCTGAGGTGTTCAAGATGGCATGTCTACGGGATATCTTGAATTTGTTC
AATGGGAAAGAGAATCCCTTCTACGCCGGGTTCGGCAACCGTCTCACCGA
TGCGCTGAGTTACCGGTCGGTGAACATCCCGTCCACCAGGATCTTCACGA
TCAATTCGAATGCCGAGGTCGTCCTGGACCTTCTTAGTCTAAACAAGTAC
AAGAGCAGTTACGTTTCGATGACGGAGCTGCTGGACCATTTCTTCCCGCC
GGTGAGTCTGCTGGTCCAGGCTGGTGGCGAAGAATACACCGACTTCACCT
ATTGGAGAGAGCCTCCTCCGGATCTGGAGGACTTTTCCTGCACAGACAGC
GAAGCAGAAGAAGGTGACCAAGAGGAGGACGAAGATGAGGAGGAGGAAGA
CGAGGAGTACGACGGGGAGCTGAGTGACGAGGAAGCAAGTGATGTCGATG
AGGATGAGGCTGGAGAAGAGCTCGGGGCGAGCTATATCTCGCAGGACTCG
GTCGATGGATCTGAACTGATGGACAGTCTCAATCTCCATGCTGCCGATGA
AGACATCGAGGACGAAGATGAGGTCGCCTCGGAAGAGGAGTTGGACCCTC
CTCGTCCAAGCCAATCCAACCCTGGCTCTCCCAAACGTTGAGTACCCTTA
CTCCTCTTTCACGGTCGCCGGATGACTCCAGCTTGGGCAGGTCCCGACAT
GGCTCGTTCGGCGATGCACCCAGCAAAATTGACCGGACGGCTACGGATAC
AGTGTTGTTGACCAAGAGCCGCTCCAACAGTGTTAGCGTAGCGGACCAAG
TATACGGAATGCAGTCCTCTGGCGCCAGCGCCGCGAGCGATGATATGGGC
CAGGATGGTCGTTCGAGAAGCCCTCCGCCATTAACTCCCGAAGAGGCGAT
GTCTCGCGCCGTCTCGCTTTCGAAGAAACTCTCCGGATCGAATATTCCGT
CTCACGTTACCGAAACGGGAGACCTCATGCTCGACATGACTGGTTACAAG
AGCAGCGAAGAGGATGCTCTGCGAGCGGAAGTTCTTGCACGGAAGATCCT
TGCCGAGGAGTTGGAGGGCCCCTATGACATCGGGGCTCTCATCGGGGCCG
ACGAACATGGGAACCTGTGGATCTACAGTAGCGAGGAAGCAAAGGAGGCT
GCCAATCGCCGAGCTACGTTCAATGCGATGCGACCGGGCTCCGCCATGAG
CGAGCATGCCATCTCCGACCCGGGGTACCACAGCGACAGTGACAAGTCTT
TGCAGGACAAGCCGCTACCCAGCCGGCACTACCGCACCCAGTCTGATGTC
CAACCCGGCTTCCCTACCCCACCGCAGTCACCGACGCCAGAAGCCCAAGA
GCCAACTCGAAACTATGCAAAGACCCTCCGTCTCACGAGTAATCAGCTGA
AGGCCCTGAACTTGAAGCCTGGTGCGAACAGCATGTCGTTCAGCGTCAAC
CGGGCTACTTGCACGGCGACGATGTATCTATGGAATGGAAATATTCCTAT
TGTAATCTCCGATATTGACGGAACCATCACCAAATGAAGCTGGGTGAAGG
TGGGGAGGCTTTCTTTGTCTTTGAGACAACAGACGAGATCCCCGCCTCGC
TGCAGACTTCGCCCCTGGTTTCTCCAAGCAGCAGTCCCAAGATGCGCAGT
GAGGAGAATCTTCCTCCATCGCTCCAGGAACCCGATTACCTGGACCTCGA
TCGATCATCTAATGGCAATTTGGATGGGAAATCTTCAACAGCCCTTCCTG
TGCTGTCGCGGAGTATGCGGGCATCGAGCGATTTAGGTCTGATGCTCTTG
GCCATGTGTTAAACATGATTGGGCGTGACTGGACTCATGCTGGAGTAGCC
AAATTGTATACTGACATTGTCAACAACGGGTATAACATCATGTACCTTAC
AAGTCGATCCGTTGGCCAGGCAGATACGACGCGGGCTTACTTGTACGGAG
TTAATCAGGACGGCTGGCGACTGCCCAAGGGGCCGGTCATCATGAGTCCT
GATCGAACCATGGCAGCACTCCGACGAGAAATCTACCTGAGGAAGCCTGA
GGTGTTCAAGATGGCATGTCTACGGGATATCTTGAATTTGTTCAATGGGA
AAGAGAATCCCTTCTACGCCGGGTTCGGCAACCGTCTCACCGATGCGCTG
AGTTACCGGTCGGTGAACATCCCGTCCACCAGGATCTTCACGATCAATTC
GAATGCCGAGGTCGTCCTGGACCTTCTTAGTCTAAACAAGTACAAGAGCA
GTTACGTTTCGATGACGGAGCTGCTGGACCATTTCTTCCCGCCGGTGAGT
CTGCTGGTCCAGGCTGGTGGCGAAGAATACACCGACTTCACCTATTGGAG
AGAGCCTCCTCCGGATCTGGAGGACTTTTCCTGCACAGACAGCGAAGCAG
AAGAAGGTGACCAAGAGGAGGACGAAGATGAGGAGGAGGAAGACGAGGAG
TACGACGGGGAGCTGAGTGACGAGGAAGCAAGTGATGTCGATGAGGATGA
GGCTGGAGAAGAGCTCGGGGCGAGCTATATCTCGCAGGACTCGGTCGATG
GATCTGAACTGATGGACAGTCTCAATCTCCATGCTGCCGATGAAGACATC
GAGGACGAAGATGAGGTCGCCTCGGAAGAGGAGTTGGACCCTCCTCGTCC
AAGCCAATCCAACCCTGGCTCTCCCAAACGTTGAGTACCCTTACTCCTCT
TTCACGGTCGCCGGATGACTCCAGCTTGGGCAGGTCCCGACATGGCTCGT
TCGGCGATGCACCCAGCAAAATTGACCGGACGGCTACGGATACAGTGTTG
TTGACCAAGAGCCGCTCCAACAGTGTTAGCGTAGCGGACCAAGTATACGG
AATGCAGTCCTCTGGCGCCAGCGCCGCGAGCGATGATATGGGCCAGGATG
GTCGTTCGAGAAGCCCTCCGCCATTAACTCCCGAAGAGGCGATGTCTCGC
GCCGTCTCGCTTTCGAAGAAACTCTCCGGATCGAATATTCCGTCTCACGT
TACCGAAACGGGAGACCTCATGCTCGACATGACTGGTTACAAGAGCAGCG
AAGAGGATGCTCTGCGAGCGGAAGTTCTTGCACGGAAGATCCTTGCCGAG
GAGTTGGAGGGCCCCTATGACATCGGGGCTCTCATCGGGGCCGACGAACA
TGGGAACCTGTGGATCTACAGTAGCGAGGAAGCAAAGGAGGCTGCCAATC
GCCGAGCTACGTTCAATGCGATGCGACCGGGCTCCGCCATGAGCGAGCAT
GCCATCTCCGACCCGGGGTACCACAGCGACAGTGACAAGTCTTTGCAGGA
CAAGCCGCTACCCAGCCGGCACTACCGCACCCAGTCTGATGTCCAACCCG
GCTTCCCTACCCCACCGCAGTCACCGACGCCAGAAGCCCAAGAGCCAACT
CGAAACTATGCAAAGACCCTCCGTCTCACGAGTAATCAGCTGAAGGCCCT
GAACTTGAAGCCTGGTGCGAACAGCATGTCGTTCAGCGTCAACCGGGCTA
CTTGCACGGCGACGATGTATCTATGGAATGGAAATATTCCTATTGTAATC
TCCGATATTGACGGAACCATCACCAAATGAAGCTGGGTGAAGGTGGGGAG
GCTTTCTTTGTCTTTGAGACAACAGACGAGATCCCCGCCTCGCTGCAGAC
TTCGCCCCTGGTTTCTCCAAGCAGCAGTCCCAAGATGCGCAGTGAGGAGA
ATCTTCCTCCATCGCTCCAGGAACCCGATTACCTGGACCTCGATCGATCA
TCTAATGGCAATTTGGATGGGAAATCTTCAACAGCCCTTCCTGTGCTGTC
GCGGAGTATGCGGGCATCGAGCGATTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010972-T2.utr3p1 | KJC3_010972-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010972-T2.utr5p1 | KJC3_010972-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036412 |
| DBxref | InterPro:IPR013209 |
| DBxref | InterPro:IPR031315 |
| DBxref | PFAM:PF08235 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4837235..4840332 - |
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