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KJC3_010978-T1, KJC3_010978-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010978-T1
Unique NameKJC3_010978-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4856416..4858494-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010978-T1 ID=KJC3_010978-T1|Name=KJC3_010978-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2079bp|location=Sequence derived from alignment at ch7:4856416..4858494- (Aspergillus niger KJC3)
CTGAGCCGCAAGCTAGCGCGACCACCCTGCCCTCTAAAAGTCTGCAACGC
TAAACCCGAAGTGGAGCATATGTGAGGTGGCAGTAAACTCTCCGCCACTC
AGAATGCAGTCACTGACTACTCACTGGAGAGGCAATTGACAGATTTATTT
GGCCGCTTCACCGCCCGCTCGTCGCTTTATTTGCCCTTCGGCTTCAATTC
ACCATGCCAGCCGGTATTTCCCATCCCCCGCCCGGCTGTAGTTCATTAAC
TCTGTGGTTATTGACTGCACTGGATGTTTGCTCCCGAGCGAACCTCCCGG
CCTTCTTCGCAGGCTGGGAAATTACCGCCTCTTCTATTGTTTAACTTTCT
GGCTTTGACTTGACGCTTGCCAAAAACATTCTGTTTGAATCTAACACCAT
GAATTTGTCTCTTGTCGATCCCTTTGTCCTCGCTCAGGATTATCCAGACA
CATTAACGGAGAAGCTGAGTATGTCGCGCATTGCCGTTAGTTCGCGGTGT
GATCACTGACCCTATACCAGGAAGTGGACATGCGACTTGTCTACGGTTTA
ATCGCAAGGGAGACTATCTTGCGTCTGGACGGGTTGGTTGCTCACAATAC
ACGGGCATTGCTTCGAAGTCAAATCAATAACCATGTCCCAGGTTGATGGA
ACAGTAGTCATCTTTGATGTGGAAACCAACGGGGTTGCGCGAAAGCTACG
AGGTCATACCAGGCAGATTCAGTCACTGAGGTACGCCCCTTGGCGCAATC
CGCCGTACACTCAGTGATGCTAACTACAAGCCGTTCACAGTTGGTCAAGA
GACGGTCGTTATCTTCTGAGTTCTTCTCAGGACTGGAAATGTATTCTATG
GGATTTGAAAGATGGCTCCCGAGTCCGCACCGTCCGCTTCGAAGCACCTG
TTTATATCGCAGAACTACACCCTTATAACCAGTATGACAGCCCCCTATCG
CTCAGCGGCTAGCACATTGCTGACGCTTCGCTCCTGCAGCTTGCTCTTTG
TAGCGTCTCTCTTCGAAGATCAGCCTGTCCTCGTTGATGTTTCTCTACCC
AAGCCCGTCAAGCGAATCCTTCCATCCGCTCCGTTCCGTCCTCCGCCTCC
GAAGAACGAAGAAATCGACCCCGCCGTAGCTGCAAAACAAGCAGCTCAAG
ATGCGAAACATTCCACGTGCGTTACGATCTTCACTGCTCTAGGAAACCAT
ATCATAGCAGGTACATCTAAGGGTTGGATCAATATTATTGAGACACAAAC
CTGTACCACAATACATTCCACTCGGCTCTGCAATGGTGTGGTGATCTTAC
TCCGCTTAGCGAGTAACGGTCGGGATCTACTAGTCAACAGCTCTGATCGT
GTCATACGCACGATCCTCATGCCAGATCTCTCACAACTGGGTATCGATCT
GGAGCCTACCAACATCAAACTCCAAGTGGAACATAAGTTCCAAGATGTGG
TGAACCGTTTAAGCTGGAACCATGTAGCATTTTCTTCCACTGGGGAATTT
GTTACTGCGTCCACGTTCATGAACCCTGACATTTATGTCTGGGAGCGAAG
CCACGGCTCCCTGGTCAAGATTTTGGAAGGCCCGCGCGAAGAACTAGGAG
TGGTCGAGTGGCACCCCAGCCGCCCGATGGTGGTTGCCTGCGGCCTAGAA
TCTGGGTGCATCTATACGTGGTCGATCGTAACGCCGCAGAAATGGTCAGC
CCTAGCCCCTGACTTCGGCGAAGTTGAAGAGAACGTCGAGTATGTCGAGC
GCGAAGATGAATTCGATATCCACCCGGCAGAGGAAATCCACCAGCGCCGT
CTAGACCAGGAAGACGAAGTCCCCGACGTTCTCACAATCGAACTGAACAA
AGACGGTGCGGATGAGGATATCGTTGCCTCATTCCGCATGCCTGTCCTTC
TTGATATTTCGGACAGTGAAAGCGAGGATGATATCATCGCTGTTGGGCCC
GGGACGATGAGGAGGCGTAGTCCAGGCGCAGCTCGTGACCGAACGAATGC
CAATGGGGATGGGGAGAAGGACAGTGTAAATGGCGGTAGGAACGGCAGCA
CACGAGGTCAAAAGGGCCGGCGGCGTTGA
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Coding sequence (CDS) from alignment at ch7:4856416..4858494-

>KJC3_010978-T1 ID=KJC3_010978-T1|Name=KJC3_010978-T1|organism=Aspergillus niger KJC3|type=CDS|length=7260bp|location=Sequence derived from alignment at ch7:4856416..4858494- (Aspergillus niger KJC3)
CTTGCTCTTTGTAGCGTCTCTCTTCGAAGATCAGCCTGTCCTCGTTGATG
TTTCTCTACCCAAGCCCGTCAAGCGAATCCTTCCATCCGCTCCGTTCCGT
CCTCCGCCTCCGAAGAACGAAGAAATCGACCCCGCCGTAGCTGCAAAACA
AGCAGCTCAAGATGCGAAACATTCCACGTGCGTTACGATCTTCACTGCTC
TAGGAAACCATATCATAGCAGGTACATCTAAGGGTTGGATCAATATTATT
GAGACACAAACCTGTACCACAATACATTCCACTCGGCTCTGCAATGGTGT
GGTGATCTTACTCCGCTTAGCGAGTAACGGTCGGGATCTACTAGTCAACA
GCTCTGATCGTGTCATACGCACGATCCTCATGCCAGATCTCTCACAACTG
GGTATCGATCTGGAGCCTACCAACATCAAACTCCAAGTGGAACATAAGTT
CCAAGATGTGGTGAACCGTTTAAGCTGGAACCATGTAGCATTTTCTTCCA
CTGGGGAATTTGTTACTGCGTCCACGTTCATGAACCCTGACATTTATGTC
TGGGAGCGAAGCCACGGCTCCCTGGTCAAGATTTTGGAAGGCCCGCGCGA
AGAACTAGGAGTGGTCGAGTGGCACCCCAGCCGCCCGATGGTGGTTGCCT
GCGGCCTAGAATCTGGGTGCATCTATACGTGGTCGATCGTAACGCCGCAG
AAATGGTCAGCCCTAGCCCCTGACTTCGGCGAAGTTGAAGAGAACGTCGA
GTATGTCGAGCGCGAAGATGAATTCGATATCCACCCGGCAGAGGAAATCC
ACCAGCGCCGTCTAGACCAGGAAGACGAAGTCCCCGACGTTCTCACAATC
GAACTGAACAAAGACGGTGCGGATGAGGATATCGTTGCCTCATTCCGCAT
GCCTGTCCTTCTTGATATTTCGGACAGTGAAAGCGAGGATGATATCATCG
CTGTTGGGCCCGGGACGATGAGGAGGCGTAGTCCAGGCGCAGCTCGTGAC
CGAACGAATGCCAATGGGGATGGGGAGAAGGACAGTGTAAATGGCGGTAG
GAACGGCAGCACACGAGGTCAAAAGGGCCGGCGGCGTTGATTGGTCAAGA
GACGGTCGTTATCTTCTGAGTTCTTCTCAGGACTGGAAATGTATTCTATG
GGATTTGAAAGATGGCTCCCGAGTCCGCACCGTCCGCTTCGAAGCACCTG
TTTATATCGCAGAACTACACCCTTATAACCAGTTGATGGAACAGTAGTCA
TCTTTGATGTGGAAACCAACGGGGTTGCGCGAAAGCTACGAGGTCATACC
AGGCAGATTCAGTCACTGAGGAAGTGGACATGCGACTTGTCTACGGTTTA
ATCGCAAGGGAGACTATCTTGCGTCTGGACGGATGAATTTGTCTCTTGTC
GATCCCTTTGTCCTCGCTCAGGATTATCCAGACACATTAACGGAGAAGCT
GACTTGCTCTTTGTAGCGTCTCTCTTCGAAGATCAGCCTGTCCTCGTTGA
TGTTTCTCTACCCAAGCCCGTCAAGCGAATCCTTCCATCCGCTCCGTTCC
GTCCTCCGCCTCCGAAGAACGAAGAAATCGACCCCGCCGTAGCTGCAAAA
CAAGCAGCTCAAGATGCGAAACATTCCACGTGCGTTACGATCTTCACTGC
TCTAGGAAACCATATCATAGCAGGTACATCTAAGGGTTGGATCAATATTA
TTGAGACACAAACCTGTACCACAATACATTCCACTCGGCTCTGCAATGGT
GTGGTGATCTTACTCCGCTTAGCGAGTAACGGTCGGGATCTACTAGTCAA
CAGCTCTGATCGTGTCATACGCACGATCCTCATGCCAGATCTCTCACAAC
TGGGTATCGATCTGGAGCCTACCAACATCAAACTCCAAGTGGAACATAAG
TTCCAAGATGTGGTGAACCGTTTAAGCTGGAACCATGTAGCATTTTCTTC
CACTGGGGAATTTGTTACTGCGTCCACGTTCATGAACCCTGACATTTATG
TCTGGGAGCGAAGCCACGGCTCCCTGGTCAAGATTTTGGAAGGCCCGCGC
GAAGAACTAGGAGTGGTCGAGTGGCACCCCAGCCGCCCGATGGTGGTTGC
CTGCGGCCTAGAATCTGGGTGCATCTATACGTGGTCGATCGTAACGCCGC
AGAAATGGTCAGCCCTAGCCCCTGACTTCGGCGAAGTTGAAGAGAACGTC
GAGTATGTCGAGCGCGAAGATGAATTCGATATCCACCCGGCAGAGGAAAT
CCACCAGCGCCGTCTAGACCAGGAAGACGAAGTCCCCGACGTTCTCACAA
TCGAACTGAACAAAGACGGTGCGGATGAGGATATCGTTGCCTCATTCCGC
ATGCCTGTCCTTCTTGATATTTCGGACAGTGAAAGCGAGGATGATATCAT
CGCTGTTGGGCCCGGGACGATGAGGAGGCGTAGTCCAGGCGCAGCTCGTG
ACCGAACGAATGCCAATGGGGATGGGGAGAAGGACAGTGTAAATGGCGGT
AGGAACGGCAGCACACGAGGTCAAAAGGGCCGGCGGCGTTGATTGGTCAA
GAGACGGTCGTTATCTTCTGAGTTCTTCTCAGGACTGGAAATGTATTCTA
TGGGATTTGAAAGATGGCTCCCGAGTCCGCACCGTCCGCTTCGAAGCACC
TGTTTATATCGCAGAACTACACCCTTATAACCAGTTGATGGAACAGTAGT
CATCTTTGATGTGGAAACCAACGGGGTTGCGCGAAAGCTACGAGGTCATA
CCAGGCAGATTCAGTCACTGAGGAAGTGGACATGCGACTTGTCTACGGTT
TAATCGCAAGGGAGACTATCTTGCGTCTGGACGGATGAATTTGTCTCTTG
TCGATCCCTTTGTCCTCGCTCAGGATTATCCAGACACATTAACGGAGAAG
CTGACTTGCTCTTTGTAGCGTCTCTCTTCGAAGATCAGCCTGTCCTCGTT
GATGTTTCTCTACCCAAGCCCGTCAAGCGAATCCTTCCATCCGCTCCGTT
CCGTCCTCCGCCTCCGAAGAACGAAGAAATCGACCCCGCCGTAGCTGCAA
AACAAGCAGCTCAAGATGCGAAACATTCCACGTGCGTTACGATCTTCACT
GCTCTAGGAAACCATATCATAGCAGGTACATCTAAGGGTTGGATCAATAT
TATTGAGACACAAACCTGTACCACAATACATTCCACTCGGCTCTGCAATG
GTGTGGTGATCTTACTCCGCTTAGCGAGTAACGGTCGGGATCTACTAGTC
AACAGCTCTGATCGTGTCATACGCACGATCCTCATGCCAGATCTCTCACA
ACTGGGTATCGATCTGGAGCCTACCAACATCAAACTCCAAGTGGAACATA
AGTTCCAAGATGTGGTGAACCGTTTAAGCTGGAACCATGTAGCATTTTCT
TCCACTGGGGAATTTGTTACTGCGTCCACGTTCATGAACCCTGACATTTA
TGTCTGGGAGCGAAGCCACGGCTCCCTGGTCAAGATTTTGGAAGGCCCGC
GCGAAGAACTAGGAGTGGTCGAGTGGCACCCCAGCCGCCCGATGGTGGTT
GCCTGCGGCCTAGAATCTGGGTGCATCTATACGTGGTCGATCGTAACGCC
GCAGAAATGGTCAGCCCTAGCCCCTGACTTCGGCGAAGTTGAAGAGAACG
TCGAGTATGTCGAGCGCGAAGATGAATTCGATATCCACCCGGCAGAGGAA
ATCCACCAGCGCCGTCTAGACCAGGAAGACGAAGTCCCCGACGTTCTCAC
AATCGAACTGAACAAAGACGGTGCGGATGAGGATATCGTTGCCTCATTCC
GCATGCCTGTCCTTCTTGATATTTCGGACAGTGAAAGCGAGGATGATATC
ATCGCTGTTGGGCCCGGGACGATGAGGAGGCGTAGTCCAGGCGCAGCTCG
TGACCGAACGAATGCCAATGGGGATGGGGAGAAGGACAGTGTAAATGGCG
GTAGGAACGGCAGCACACGAGGTCAAAAGGGCCGGCGGCGTTGATTGGTC
AAGAGACGGTCGTTATCTTCTGAGTTCTTCTCAGGACTGGAAATGTATTC
TATGGGATTTGAAAGATGGCTCCCGAGTCCGCACCGTCCGCTTCGAAGCA
CCTGTTTATATCGCAGAACTACACCCTTATAACCAGTTGATGGAACAGTA
GTCATCTTTGATGTGGAAACCAACGGGGTTGCGCGAAAGCTACGAGGTCA
TACCAGGCAGATTCAGTCACTGAGGAAGTGGACATGCGACTTGTCTACGG
TTTAATCGCAAGGGAGACTATCTTGCGTCTGGACGGATGAATTTGTCTCT
TGTCGATCCCTTTGTCCTCGCTCAGGATTATCCAGACACATTAACGGAGA
AGCTGACTTGCTCTTTGTAGCGTCTCTCTTCGAAGATCAGCCTGTCCTCG
TTGATGTTTCTCTACCCAAGCCCGTCAAGCGAATCCTTCCATCCGCTCCG
TTCCGTCCTCCGCCTCCGAAGAACGAAGAAATCGACCCCGCCGTAGCTGC
AAAACAAGCAGCTCAAGATGCGAAACATTCCACGTGCGTTACGATCTTCA
CTGCTCTAGGAAACCATATCATAGCAGGTACATCTAAGGGTTGGATCAAT
ATTATTGAGACACAAACCTGTACCACAATACATTCCACTCGGCTCTGCAA
TGGTGTGGTGATCTTACTCCGCTTAGCGAGTAACGGTCGGGATCTACTAG
TCAACAGCTCTGATCGTGTCATACGCACGATCCTCATGCCAGATCTCTCA
CAACTGGGTATCGATCTGGAGCCTACCAACATCAAACTCCAAGTGGAACA
TAAGTTCCAAGATGTGGTGAACCGTTTAAGCTGGAACCATGTAGCATTTT
CTTCCACTGGGGAATTTGTTACTGCGTCCACGTTCATGAACCCTGACATT
TATGTCTGGGAGCGAAGCCACGGCTCCCTGGTCAAGATTTTGGAAGGCCC
GCGCGAAGAACTAGGAGTGGTCGAGTGGCACCCCAGCCGCCCGATGGTGG
TTGCCTGCGGCCTAGAATCTGGGTGCATCTATACGTGGTCGATCGTAACG
CCGCAGAAATGGTCAGCCCTAGCCCCTGACTTCGGCGAAGTTGAAGAGAA
CGTCGAGTATGTCGAGCGCGAAGATGAATTCGATATCCACCCGGCAGAGG
AAATCCACCAGCGCCGTCTAGACCAGGAAGACGAAGTCCCCGACGTTCTC
ACAATCGAACTGAACAAAGACGGTGCGGATGAGGATATCGTTGCCTCATT
CCGCATGCCTGTCCTTCTTGATATTTCGGACAGTGAAAGCGAGGATGATA
TCATCGCTGTTGGGCCCGGGACGATGAGGAGGCGTAGTCCAGGCGCAGCT
CGTGACCGAACGAATGCCAATGGGGATGGGGAGAAGGACAGTGTAAATGG
CGGTAGGAACGGCAGCACACGAGGTCAAAAGGGCCGGCGGCGTTGATTGG
TCAAGAGACGGTCGTTATCTTCTGAGTTCTTCTCAGGACTGGAAATGTAT
TCTATGGGATTTGAAAGATGGCTCCCGAGTCCGCACCGTCCGCTTCGAAG
CACCTGTTTATATCGCAGAACTACACCCTTATAACCAGTTGATGGAACAG
TAGTCATCTTTGATGTGGAAACCAACGGGGTTGCGCGAAAGCTACGAGGT
CATACCAGGCAGATTCAGTCACTGAGGAAGTGGACATGCGACTTGTCTAC
GGTTTAATCGCAAGGGAGACTATCTTGCGTCTGGACGGATGAATTTGTCT
CTTGTCGATCCCTTTGTCCTCGCTCAGGATTATCCAGACACATTAACGGA
GAAGCTGACTTGCTCTTTGTAGCGTCTCTCTTCGAAGATCAGCCTGTCCT
CGTTGATGTTTCTCTACCCAAGCCCGTCAAGCGAATCCTTCCATCCGCTC
CGTTCCGTCCTCCGCCTCCGAAGAACGAAGAAATCGACCCCGCCGTAGCT
GCAAAACAAGCAGCTCAAGATGCGAAACATTCCACGTGCGTTACGATCTT
CACTGCTCTAGGAAACCATATCATAGCAGGTACATCTAAGGGTTGGATCA
ATATTATTGAGACACAAACCTGTACCACAATACATTCCACTCGGCTCTGC
AATGGTGTGGTGATCTTACTCCGCTTAGCGAGTAACGGTCGGGATCTACT
AGTCAACAGCTCTGATCGTGTCATACGCACGATCCTCATGCCAGATCTCT
CACAACTGGGTATCGATCTGGAGCCTACCAACATCAAACTCCAAGTGGAA
CATAAGTTCCAAGATGTGGTGAACCGTTTAAGCTGGAACCATGTAGCATT
TTCTTCCACTGGGGAATTTGTTACTGCGTCCACGTTCATGAACCCTGACA
TTTATGTCTGGGAGCGAAGCCACGGCTCCCTGGTCAAGATTTTGGAAGGC
CCGCGCGAAGAACTAGGAGTGGTCGAGTGGCACCCCAGCCGCCCGATGGT
GGTTGCCTGCGGCCTAGAATCTGGGTGCATCTATACGTGGTCGATCGTAA
CGCCGCAGAAATGGTCAGCCCTAGCCCCTGACTTCGGCGAAGTTGAAGAG
AACGTCGAGTATGTCGAGCGCGAAGATGAATTCGATATCCACCCGGCAGA
GGAAATCCACCAGCGCCGTCTAGACCAGGAAGACGAAGTCCCCGACGTTC
TCACAATCGAACTGAACAAAGACGGTGCGGATGAGGATATCGTTGCCTCA
TTCCGCATGCCTGTCCTTCTTGATATTTCGGACAGTGAAAGCGAGGATGA
TATCATCGCTGTTGGGCCCGGGACGATGAGGAGGCGTAGTCCAGGCGCAG
CTCGTGACCGAACGAATGCCAATGGGGATGGGGAGAAGGACAGTGTAAAT
GGCGGTAGGAACGGCAGCACACGAGGTCAAAAGGGCCGGCGGCGTTGATT
GGTCAAGAGACGGTCGTTATCTTCTGAGTTCTTCTCAGGACTGGAAATGT
ATTCTATGGGATTTGAAAGATGGCTCCCGAGTCCGCACCGTCCGCTTCGA
AGCACCTGTTTATATCGCAGAACTACACCCTTATAACCAGTTGATGGAAC
AGTAGTCATCTTTGATGTGGAAACCAACGGGGTTGCGCGAAAGCTACGAG
GTCATACCAGGCAGATTCAGTCACTGAGGAAGTGGACATGCGACTTGTCT
ACGGTTTAATCGCAAGGGAGACTATCTTGCGTCTGGACGGATGAATTTGT
CTCTTGTCGATCCCTTTGTCCTCGCTCAGGATTATCCAGACACATTAACG
GAGAAGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010978KJC3_010978Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010978-T1KJC3_010978-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010978-T1.cdsKJC3_010978-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010978-T1.exon6KJC3_010978-T1.exon6Aspergillus niger KJC3exon
KJC3_010978-T1.exon5KJC3_010978-T1.exon5Aspergillus niger KJC3exon
KJC3_010978-T1.exon4KJC3_010978-T1.exon4Aspergillus niger KJC3exon
KJC3_010978-T1.exon3KJC3_010978-T1.exon3Aspergillus niger KJC3exon
KJC3_010978-T1.exon2KJC3_010978-T1.exon2Aspergillus niger KJC3exon
KJC3_010978-T1.exon1KJC3_010978-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010978-T1.utr5p2KJC3_010978-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_010978-T1.utr5p1KJC3_010978-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262XRU
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4856416..4858494 -
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