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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4872217..4876200+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010983-T1 ID=KJC3_010983-T1|Name=KJC3_010983-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3984bp|location=Sequence derived from alignment at ch7:4872217..4876200+ (Aspergillus niger KJC3)
TGCCGTTTATCTGCTACTAATTGCATACCATATTGTGTGGGATTGGTATT
CCCTGCTTGCATTCAATACTATTGTATCGCAGTTAGGTCTTCTTCGTCCT
GTGTCCAAGCCAGCGTGTGACTGGGATTGGCCCTGCAAACGGATCTTGGA
GGCATTTCTCTCTCGATACCCTCCCCTATCTCTCGAAAAGTAAATATATA
TCAGCATGGCTACACCTACAGTATCGACTCCCGTGAAGACCCACCATGGG
ATCTTCTCCACCAAGACGGCTGGTGGCCGCATGCCCCTTACACCTTCACC
ACGCACTCGCGCAGGAAGTGTGACGTCAAACCACTCTTCCCCATTCACAC
CTCCCTGTGGTGCTCAAGAATCAGGCAAGGAGCATGGAAAGTCCGTCTAC
GGTGGTAACCTCTCTTCATACTTCGCCAAGTCTGTCTCGAGGACAGCCCG
CAACTACCGCGAATCCCCCAAGTCCAACATCGCCCGTGCTCGCACACGCA
AGTCTCCCAGACACCTTGAGCTGGGTGTATCAGAATGGGCCCTGACAGGC
ACCGGTCCATCATCACGGACTCCTACCAAGGAGCGCCTACGAAAAGAGGT
CGTGGGGAAGGAAGTGGCCAAGGAGGTGATCAGAAAAGAACCGCCGAAGA
AGGAGGTAGTCAAGAAGGAGGCAGTCAAAAAGGAGGTGTCGAGGAAAGAA
GCGCCAAGAAAGGAGATCACCACTCGGACCACGAGGTCAGGAAAGACGAC
CGTCCGCATTCCCCACAACGCGGGTGACAGATTCATTCCGAACCGTACTG
CCAGTGAGGGTCTTGTAACTGCCGGCACAGCCAAGCCAGAGGAAAGCCAA
CGGCCAAAGACCAGCAGCAGTGATGGATCCTCTGTCCTTGCCAATGCCGC
GAGTGCCTTTGACATTGGTGGCCGCGGAACTGACGAAGACATCACCGCAG
CTCTTGAAAGCCTTGGGCTCGAGGATAACGAGCCAACGACCTCATACACC
AAGCCAGCACCGGATGCTGTCGCGTACGAGTCATCATTGGCAGATGCCTG
TGGTGTGAATCTGAACACTCGCATCCTGGCCTTCAAACCGCCACCCCCAG
AGTCATCCAAGCCCATTGATCTGCGCGCTCAGTACAACCGCCCTCTCAAG
CCTGCCAAATCCCAGTCAGCTCAGTTCCGCCGACGGGTCCAAACGGCTCC
TGAGCGTGTTCTGGACGCCCCTGGACTTCTTGACGATTACTATCTCAATT
TGCTGGATTGGAGCTCTGGCAACCAGGTTGCAATTGGCTTGGAGCGCAAT
GTTTACGTATGGTCCGCCGATTCAGGATCGGTCAGCTGCCTACTGGAGAC
TGCACCCGACACCTACGTGAGCAGTGTGAAGTGGAGTGGTGATGGCGCCT
ACGTCGGTGTCGGCCTTGGAACTGGTGAAGTCCAAATTTGGGATGTTGAG
GAAGGAACCAAGCTTCGCAGTATGTTTGGCCATGACTCTCGTGTAGGTGT
CATGGGCTGGTCTAAGCACACACTGTCTACCGGTGCCCGCAGTGGTCTGG
TATTCAACCATGATGTTCGTATTGCACAGCACAAGGTTGCTGAGCTGGTC
TCGCATACCTCTGAAGTCTGTGGTCTGGAATGGAGACCCGATGGTGCTCA
GCTCGCCACCGGTGGTAACGACAATCTGGTTAACATCTGGGATGCTCGCT
CTCTCAGCGCGCCCAAGTTCACCAAGACCAACCACCGCGCTGCCGTTAAG
GCCCTCAGTTGGTGCCCCTGGCAGTTGAACCTGCTTGCCACTGGTGGAGG
TTCCTATGACCGCCACATCCACTTCTGGAACACTACCACTGGTGCTCGCA
CCAACAGCATCGACACCGGCTCCCAGGTCACCAGCTTGAGATGGAGCAAC
CACTACCGCGAGATTGTTAGCTCAAGTGGATTCCCCGACAACTCGTTGAG
CATCTGGAGCTATCCCACTCTGGTTCGGAACGTTGAGATTCCGGCCCACG
AGACTCGTGTACTGCACAGCTGTCTTAGCCCAGATGGGCAACTCCTGGCC
ACCGCAGCCGCTGACGAGAGTTTGAAGTTCTGGAAGATCTTCGAGCGCAA
GCCTGGAACCACCGCTGCTGCCTCTCGGGAGGGTGGTGTTGGCAGCAAGG
CTCAGATGACCAAATCCATGACCATCCGGTAAATGGGTTGGTTGTCTTTC
AACTCTTCTCATCTTGTTAATTATTTTCCTTCTTCGATGACTATATTTCG
GGTTCGGTATCGTAGACCGGTTCTGTCTAGATATCATTGGTTCTATCGGT
GTTCATTACATTGGGGGCACATATTCGGATCCATGGGATGGAAGGGGTGT
TATTGGTAACTGGCGTTTGTATCTAGGTTTGACCGTATAATAGCTGTCAG
GATTCTTGTATAGAAAGTTGCATACTCATCACTGCTCGTCTTTTCCCGCT
TGCGTCTTAGAGGGGATAGAAGCTGGCCAACCCATGACCTAGTCAAGGCT
TTGCGGCTAGCCCTTCAATAGAAGTTCGACTGAAGTGGCAAGTCAGAATC
ATTCAACAACAGATCCCATTGCAGCGCATCCATTTCCGGCGCCACATTGA
AGAGATCAGACCACAGCTGACCCCAGCTATTCCTTCTTGCTCCGCTCCAC
ATTGGGTCCTCATCTTCATGACTCGAGCCATGCATGCTAGCCGTGAAAGG
AAGATGCCCGCTGGCCACATTTGTCATGTTCTCATCTACCCCAACAGACC
GTGGCTGTGATGGAGCAGCGCTTGACTTCGTCCCACCCGATCCAGACGGC
ACAGAACCAATATCATTTTCTTTAGGTGACCTTCCCTGTTGTTGCAATTC
CCTCTGAGCGTCCTGAAGAATGGACAACAACGTCTGCGTATTCTTCCGAA
TCGCTTCCATGAGCGACGCCGACACATTCTGCGATTTCTCCAGCACATGG
ATAACATCTAACACTTCCTGCTTGCGGGTATCTGCGCCCGGAGCAGTTGG
GTTCATGGAGACGTCCGTGGCTAGGACCATGGCGGCGAAGAAAACATGGT
TCATGACAAGGCTATAATCTGAGGGATTGAAGCCGGAGAGAACGCCTGTG
TCTTCTAGGGAGTGGCGGAGGTCGAGGACAGTTTGGGCGGAGCGAATGCA
GGTTAGTCGAGAGTAGGCGAATTTGGGGTTCGTTAGGCCTTCTCGGTGGT
AGGGGCGGTGGAGGCGGCAGAGGCGGACGTGAAAGCTTAGATGGGCGACA
GTTCGTTGCCAGGCTAGGTAGGGTCGCTGTTGGGTTATGTCTTGGCTTTT
TTGGATGCTGGCGGGGTCGTTTCGGAGGAATAATGGTAGGGATTGGATGA
AGGTGTGGAATTTGCCGTCGATTTCGAGTAGGGTCTCGTAGTCAGGTTGG
TCGGATTCGAGGAGTGTGGTGCCCAGGGTGTCGATGATTTCGCGGCATAG
TTCTGCGTAGTGGATTCTGAAGATGAATACTGACATGGAGGTGGGAACTG
ATAGGGGAAAGCTGTGCTCTGGTCCTGTGGGCGTTAAGAACTCGTCGTCG
ATGTTGCTTGGATGGTTTACTTTCATGTGTTTTGGGTGGATGAGGTATGT
GCCTTCTTGTGGGCTTTGCGAAAATGCGCTGATCCTGTGGTTGTTAGTGG
TTGAGAGGGATATGAAGGTGAAGGAGGTAAATATTAGTTACCAGTCCGAG
GAGACTAGGTGCCACCATGCTCGTCGCTGTACTTCGACCTCGATGGCATT
GTATCCTGAACGTTTCCTTTCCTCTCGCCTTTGAACTGTGTCTAGCCGAT
GGATTTGCATCGATCGAGCCATGCATATCGCGTCGACTCTGAGTGCTTGG
GCTTTGTGGGAATACCAATCCGCATGGAAGAGAACGCGGGCCAAGGCACT
GATGGCTTCGAGAGCAATTGTTGATGGCGGCACTGATTGAATTGGATTGT
CTAATATGCAGATAGCTAAACGCACATATGCAGT back to topCoding sequence (CDS) from alignment at ch7:4872217..4876200+ >KJC3_010983-T1 ID=KJC3_010983-T1|Name=KJC3_010983-T1|organism=Aspergillus niger KJC3|type=CDS|length=1977bp|location=Sequence derived from alignment at ch7:4872217..4876200+ (Aspergillus niger KJC3)
ATGGCTACACCTACAGTATCGACTCCCGTGAAGACCCACCATGGGATCTT
CTCCACCAAGACGGCTGGTGGCCGCATGCCCCTTACACCTTCACCACGCA
CTCGCGCAGGAAGTGTGACGTCAAACCACTCTTCCCCATTCACACCTCCC
TGTGGTGCTCAAGAATCAGGCAAGGAGCATGGAAAGTCCGTCTACGGTGG
TAACCTCTCTTCATACTTCGCCAAGTCTGTCTCGAGGACAGCCCGCAACT
ACCGCGAATCCCCCAAGTCCAACATCGCCCGTGCTCGCACACGCAAGTCT
CCCAGACACCTTGAGCTGGGTGTATCAGAATGGGCCCTGACAGGCACCGG
TCCATCATCACGGACTCCTACCAAGGAGCGCCTACGAAAAGAGGTCGTGG
GGAAGGAAGTGGCCAAGGAGGTGATCAGAAAAGAACCGCCGAAGAAGGAG
GTAGTCAAGAAGGAGGCAGTCAAAAAGGAGGTGTCGAGGAAAGAAGCGCC
AAGAAAGGAGATCACCACTCGGACCACGAGGTCAGGAAAGACGACCGTCC
GCATTCCCCACAACGCGGGTGACAGATTCATTCCGAACCGTACTGCCAGT
GAGGGTCTTGTAACTGCCGGCACAGCCAAGCCAGAGGAAAGCCAACGGCC
AAAGACCAGCAGCAGTGATGGATCCTCTGTCCTTGCCAATGCCGCGAGTG
CCTTTGACATTGGTGGCCGCGGAACTGACGAAGACATCACCGCAGCTCTT
GAAAGCCTTGGGCTCGAGGATAACGAGCCAACGACCTCATACACCAAGCC
AGCACCGGATGCTGTCGCGTACGAGTCATCATTGGCAGATGCCTGTGGTG
TGAATCTGAACACTCGCATCCTGGCCTTCAAACCGCCACCCCCAGAGTCA
TCCAAGCCCATTGATCTGCGCGCTCAGTACAACCGCCCTCTCAAGCCTGC
CAAATCCCAGTCAGCTCAGTTCCGCCGACGGGTCCAAACGGCTCCTGAGC
GTGTTCTGGACGCCCCTGGACTTCTTGACGATTACTATCTCAATTTGCTG
GATTGGAGCTCTGGCAACCAGGTTGCAATTGGCTTGGAGCGCAATGTTTA
CGTATGGTCCGCCGATTCAGGATCGGTCAGCTGCCTACTGGAGACTGCAC
CCGACACCTACGTGAGCAGTGTGAAGTGGAGTGGTGATGGCGCCTACGTC
GGTGTCGGCCTTGGAACTGGTGAAGTCCAAATTTGGGATGTTGAGGAAGG
AACCAAGCTTCGCAGTATGTTTGGCCATGACTCTCGTGTAGGTGTCATGG
GCTGGTCTAAGCACACACTGTCTACCGGTGCCCGCAGTGGTCTGGTATTC
AACCATGATGTTCGTATTGCACAGCACAAGGTTGCTGAGCTGGTCTCGCA
TACCTCTGAAGTCTGTGGTCTGGAATGGAGACCCGATGGTGCTCAGCTCG
CCACCGGTGGTAACGACAATCTGGTTAACATCTGGGATGCTCGCTCTCTC
AGCGCGCCCAAGTTCACCAAGACCAACCACCGCGCTGCCGTTAAGGCCCT
CAGTTGGTGCCCCTGGCAGTTGAACCTGCTTGCCACTGGTGGAGGTTCCT
ATGACCGCCACATCCACTTCTGGAACACTACCACTGGTGCTCGCACCAAC
AGCATCGACACCGGCTCCCAGGTCACCAGCTTGAGATGGAGCAACCACTA
CCGCGAGATTGTTAGCTCAAGTGGATTCCCCGACAACTCGTTGAGCATCT
GGAGCTATCCCACTCTGGTTCGGAACGTTGAGATTCCGGCCCACGAGACT
CGTGTACTGCACAGCTGTCTTAGCCCAGATGGGCAACTCCTGGCCACCGC
AGCCGCTGACGAGAGTTTGAAGTTCTGGAAGATCTTCGAGCGCAAGCCTG
GAACCACCGCTGCTGCCTCTCGGGAGGGTGGTGTTGGCAGCAAGGCTCAG
ATGACCAAATCCATGACCATCCGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010983-T1.utr5p1 | KJC3_010983-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR024977 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12894 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4872217..4876200 + |
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