|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4878329..4881457+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010985-T1 ID=KJC3_010985-T1|Name=KJC3_010985-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3129bp|location=Sequence derived from alignment at ch7:4878329..4881457+ (Aspergillus niger KJC3)
TCTCTCTTTGTGTAGTACTCTACAGTAAGGAAGTCGGATAAGACGAGATT
AGATTGTCATGAGGCTTGCATGAGCTGGGCGGAAAACCAAGAACGTGATT
TGTCGCACAACCACGCGGCTGAGCGGCTGACAGATGGTGGATGATTCTGG
GGTCTAAACCACGATAACTGGCAAACCAAGGGATAAGTTGAAGTGGCGAG
GAGATACTGGAGATCTGAAAGTCAAAAAGTCAAAGAGCAGCTCTTGCGTC
GCGCCGGGGCAGATCCCCCGGACCTCCCACTAGGGACTAGCGGTGGTGGT
GACTAAGCAGGCGGGAGGAAGGCGGATTTCGCCCGGAGAGAGCGACTTTC
ACCTCAACCACATCCCTCCGGCACGCCTGCCTTGCTTTCACTCTCCCTTC
CGGCATTCACCCGGCATTCTACGGCTCGTCACGCGCTGAGACCTTTAATA
TTGAGTTCTTGAAGTAAGAAAGACCATCTACAGAAGCAGTGCAAGTTCGA
GGGTGGTCGGAAGTAGTGGTTGTGGAGACTCAACTGTCGCATTCGCCCGT
GGCAAGCGACCGCTGCGACGGCGAGGCTTTACCTGTGATAAGCCCGACAA
CACCATTCACGTCGAGCTCTCGCGTGTTAATAGGCCCCTGTTCTTTTTTC
TACTTCCTTAGAAGACAGAGCAAATTTATTTGACCCCAACTTCATTAAAA
TTCCCTTCACCTGGCTTGACAAAGCGTCTTCTCGTCCTTGTCTGATCCCA
GCAGCGATCATGTCGAACCAGCAGGTGGTGAGTGCATCTTTAAAAACACA
AACCTTGCCAGAGCTAGAGACTTCGATGGGCCTGGACTGTGGCTCAATAC
TCCCTGCGAAGTTCTCTATTTCCCCGCTCTAACCCCATCATGATACCATG
TGAGATGTTGGCTTATACCAGTTATCCCTAGGGCACGGTGTTCGATCGTG
TCATCCAGGAGGTCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGT
GTGGACCAGCAAACACTGTTAGATTTGCGCAAGGTTAGTGCTCCATCAAC
ATCCATCTTCCTTTGTTGGAGAGATTTCTTTGAGGTCAAAAGAAGTCGAT
ATGCTTGGGGGGTGAGAGCCCCAGGGGGAGACGCCCCAAGCGGGGTCCGA
GAGGTGCGGGAAGGGCGGCCGCCTGGGGGCATCGCCTGCTTTTGAGTCTC
TTTTTATACCGCGCCGCTTTTACCCGCCCTAGTCGGCCTGCCAAGCCGCT
TCAGCATCGTCATTCGCTGCCCGTTTCCCCTTCACCTCTCGGTCTCAGAT
TTCCTTATACTTATCGCTTGACCCTTTGGCTCCTTGCTCCATTCATATAT
TTCTTTTAATTAAAACCTTTCAGTCTGCTAATATTTCCCCTCCAGAGCTG
GCAGAAGAAGCTCTCCTCATTGGGTGTCGCTCACTTCCCTTGGGATCCGC
CGCCGCCGCAACCGGCTCCCCCTCAGACGCAAAATATCCTCCCTCCTACA
GCAACTGTACCATCAAATGCTCCCCGGCCTGGTCCGCCCCCTCAGCCACA
GCATCATGTTCCTCCTCCACCTCTGCAGCAACCCATTCCTCAGTCCGCCC
CCGCTACGGCACCTCCGCTCCAAGCTCCTACTCCAGTTGGGGCCGGCCCC
AATGCCATGGGTCAACAACAACCTCACATCAAGACCGAACCTGGCGTCAA
CGGTCAACCGGGGATGATTCCGATGAATAATATGATGATGCCAAACTCCT
CCAACCCTCAGTCTGCTCAAGAACGGGCTGCCAATATGCTTCGTCAGCGT
TACGGCGCAGCAGCCGCTAACTCGGTCAGTCAGCTGCAAGCACAGTCACA
GGCACAAGCAGCCATGGCCATGCCGGGCCAGCAGCGCCCCCAACCCATGC
AGCATGTGCCCAACGGACAGGCTCCACAGATCAAGCAAGAACCGGGTTAC
CCCCCTGTGTCTCAACCCCCCGTCGGCAATACTCAAACGGACGGTGCCGG
TGATGATGCCTTGTCTGCATGGAAGGCTGAGGTTGCACGGAGGCGGGAAG
CTGCTGAACGCCAGGGAGGAGAAGGCGATCGTCTCCTTCGTGAACATCTC
AGACAACGGATGCTCCAATTAGAAGGCGGTGGTCTGATGTTGCCTCTCGA
CGAGCATGACTACTCATCAAAGACATTGACTCGTGGGCTGGTGGCTACCC
AAGCAGAGCCAGCTGAGGTATCAGAAGTTGCTGGCTCCTCGTTGCATCCG
CCCAAGGTTCTCGGAGCTCAGTTTGACGGTCCCGGTGGTGATGATGAAAG
GGATGAGGATGATGAAGATGCTATCAACTCGGACCTTGACGACCCTGATG
ACCTTGTTGCTGAGGATCATGATGCTGAAGATGCCGTAGGCCAGGTCATG
CTTTGCACTTACGACAAGGTACAACGCGTGAAGAACAAGTGGAAGTGCAC
ACTTAAAGATGGTATTTTGACCACCGGTGGCAAGGAGTAAGTGCCCTCTT
TTCATTAACCCCATATCCAATCTCCCGCTAACGAGTTGACAGGTACGTCT
TCCACAAAGGTCAAGGAGAGTTCGAGTGGTAAATGGGCGTAAGCGTCACC
CATTTGCTCCGGATAATCCCAGATCGTGTATTTTCTTCTCCATACCTCTT
CTTCATCTGTTCTACTGGCCTCGTTTTCGATCCCCCATTATACTCAGCAT
GTAAAAATCCCAGATTTGACTCAGGATTCTATGAGCAACGAAACCCATAT
CTGGCTCCTTTTTCTTCTTCCAACTATGTCTGGATGGTCGGTGCAAGCGG
AAATTTGCCTCAAATGACGATTTGATTTTCACGAAGTAAACAAACAACAC
CGGGACTCCTGTTTTCTTATTTTTTTTGTCATTGATTAAGATTCTTTTCC
CTCATACTCTTTGCTTCTTCCCCACATTGGATGTATGTGGCGCTTATGAG
GTGGACGGCGGTTCCTTTTCAGTCTAAGCTGTACTAGAGTAACATATCTG
AATTGAATGAAACAGATTGTTTTCTAGTTTCTGGATCACACACTCGTCTA
GAATAACGAGCAGCCGAATAATGTAACCAAAGATCATCTTGTACCATTAA
TGAGCCAAATTAATCGATCACGTGTGGCC back to topCoding sequence (CDS) from alignment at ch7:4878329..4881457+ >KJC3_010985-T1 ID=KJC3_010985-T1|Name=KJC3_010985-T1|organism=Aspergillus niger KJC3|type=CDS|length=5004bp|location=Sequence derived from alignment at ch7:4878329..4881457+ (Aspergillus niger KJC3)
ATGTCGAACCAGCAGGTGGGCACGGTGTTCGATCGTGTCATCCAGGAGGT
CTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAGCAAA
CACTGTTAGATTTGCGCAAGAGCTGGCAGAAGAAGCTCTCCTCATTGGGT
GTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGCAACCGGCTCCCCCTCA
GACGCAAAATATCCTCCCTCCTACAGCAACTGTACCATCAAATGCTCCCC
GGCCTGGTCCGCCCCCTCAGCCACAGCATCATGTTCCTCCTCCACCTCTG
CAGCAACCCATTCCTCAGTCCGCCCCCGCTACGGCACCTCCGCTCCAAGC
TCCTACTCCAGTTGGGGCCGGCCCCAATGCCATGGGTCAACAACAACCTC
ACATCAAGACCGAACCTGGCGTCAACGGTCAACCGGGGATGATTCCGATG
AATAATATGATGATGCCAAACTCCTCCAACCCTCAGTCTGCTCAAGAACG
GGCTGCCAATATGCTTCGTCAGCGTTACGGCGCAGCAGCCGCTAACTCGG
TCAGTCAGCTGCAAGCACAGTCACAGGCACAAGCAGCCATGGCCATGCCG
GGCCAGCAGCGCCCCCAACCCATGCAGCATGTGCCCAACGGACAGGCTCC
ACAGATCAAGCAAGAACCGGGTTACCCCCCTGTGTCTCAACCCCCCGTCG
GCAATACTCAAACGGACGGTGCCGGTGATGATGCCTTGTCTGCATGGAAG
GCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCCAGGGAGGAGAAGG
CGATCGTCTCCTTCGTGAACATCTCAGACAACGGATGCTCCAATTAGAAG
GCGGTGGTCTGATGTTGCCTCTCGACGAGCATGACTACTCATCAAAGACA
TTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAGCTGAGGTATCAGA
AGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTCGGAGCTCAGTTTG
ACGGTCCCGGTGGTGATGATGAAAGGGATGAGGATGATGAAGATGCTATC
AACTCGGACCTTGACGACCCTGATGACCTTGTTGCTGAGGATCATGATGC
TGAAGATGCCGTAGGCCAGGTCATGCTTTGCACTTACGACAAGGTACAAC
GCGTGAAGAACAAGTGGAAGTGCACACTTAAAGATGGTATTTTGACCACC
GGTGGCAAGGAGTACGTCTTCCACAAAGGTCAAGGAGAGTTCGAGTGGTA
AATGTCGAACCAGCAGGTGGGCACGGTGTTCGATCGTGTCATCCAGGAGG
TCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAGCAA
ACACTGTTAGATTTGCGCAAGAGCTGGCAGAAGAAGCTCTCCTCATTGGG
TGTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGCAACCGGCTCCCCCTC
AGACGCAAAATATCCTCCCTCCTACAGCAACTGTACCATCAAATGCTCCC
CGGCCTGGTCCGCCCCCTCAGCCACAGCATCATGTTCCTCCTCCACCTCT
GCAGCAACCCATTCCTCAGTCCGCCCCCGCTACGGCACCTCCGCTCCAAG
CTCCTACTCCAGTTGGGGCCGGCCCCAATGCCATGGGTCAACAACAACCT
CACATCAAGACCGAACCTGGCGTCAACGGTCAACCGGGGATGATTCCGAT
GAATAATATGATGATGCCAAACTCCTCCAACCCTCAGTCTGCTCAAGAAC
GGGCTGCCAATATGCTTCGTCAGCGTTACGGCGCAGCAGCCGCTAACTCG
GTCAGTCAGCTGCAAGCACAGTCACAGGCACAAGCAGCCATGGCCATGCC
GGGCCAGCAGCGCCCCCAACCCATGCAGCATGTGCCCAACGGACAGGCTC
CACAGATCAAGCAAGAACCGGGTTACCCCCCTGTGTCTCAACCCCCCGTC
GGCAATACTCAAACGGACGGTGCCGGTGATGATGCCTTGTCTGCATGGAA
GGCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCCAGGGAGGAGAAG
GCGATCGTCTCCTTCGTGAACATCTCAGACAACGGATGCTCCAATTAGAA
GGCGGTGGTCTGATGTTGCCTCTCGACGAGCATGACTACTCATCAAAGAC
ATTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAGCTGAGGTATCAG
AAGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTCGGAGCTCAGTTT
GACGGTCCCGGTGGTGATGATGAAAGGGATGAGGATGATGAAGATGCTAT
CAACTCGGACCTTGACGACCCTGATGACCTTGTTGCTGAGGATCATGATG
CTGAAGATGCCGTAGGCCAGGTCATGCTTTGCACTTACGACAAGGTACAA
CGCGTGAAGAACAAGTGGAAGTGCACACTTAAAGATGGTATTTTGACCAC
CGGTGGCAAGGAGTACGTCTTCCACAAAGGTCAAGGAGAGTTCGAGTGGT
AAATGTCGAACCAGCAGGTGGGCACGGTGTTCGATCGTGTCATCCAGGAG
GTCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAGCA
AACACTGTTAGATTTGCGCAAGAGCTGGCAGAAGAAGCTCTCCTCATTGG
GTGTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGCAACCGGCTCCCCCT
CAGACGCAAAATATCCTCCCTCCTACAGCAACTGTACCATCAAATGCTCC
CCGGCCTGGTCCGCCCCCTCAGCCACAGCATCATGTTCCTCCTCCACCTC
TGCAGCAACCCATTCCTCAGTCCGCCCCCGCTACGGCACCTCCGCTCCAA
GCTCCTACTCCAGTTGGGGCCGGCCCCAATGCCATGGGTCAACAACAACC
TCACATCAAGACCGAACCTGGCGTCAACGGTCAACCGGGGATGATTCCGA
TGAATAATATGATGATGCCAAACTCCTCCAACCCTCAGTCTGCTCAAGAA
CGGGCTGCCAATATGCTTCGTCAGCGTTACGGCGCAGCAGCCGCTAACTC
GGTCAGTCAGCTGCAAGCACAGTCACAGGCACAAGCAGCCATGGCCATGC
CGGGCCAGCAGCGCCCCCAACCCATGCAGCATGTGCCCAACGGACAGGCT
CCACAGATCAAGCAAGAACCGGGTTACCCCCCTGTGTCTCAACCCCCCGT
CGGCAATACTCAAACGGACGGTGCCGGTGATGATGCCTTGTCTGCATGGA
AGGCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCCAGGGAGGAGAA
GGCGATCGTCTCCTTCGTGAACATCTCAGACAACGGATGCTCCAATTAGA
AGGCGGTGGTCTGATGTTGCCTCTCGACGAGCATGACTACTCATCAAAGA
CATTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAGCTGAGGTATCA
GAAGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTCGGAGCTCAGTT
TGACGGTCCCGGTGGTGATGATGAAAGGGATGAGGATGATGAAGATGCTA
TCAACTCGGACCTTGACGACCCTGATGACCTTGTTGCTGAGGATCATGAT
GCTGAAGATGCCGTAGGCCAGGTCATGCTTTGCACTTACGACAAGGTACA
ACGCGTGAAGAACAAGTGGAAGTGCACACTTAAAGATGGTATTTTGACCA
CCGGTGGCAAGGAGTACGTCTTCCACAAAGGTCAAGGAGAGTTCGAGTGG
TAAATGTCGAACCAGCAGGTGGGCACGGTGTTCGATCGTGTCATCCAGGA
GGTCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAGC
AAACACTGTTAGATTTGCGCAAGAGCTGGCAGAAGAAGCTCTCCTCATTG
GGTGTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGCAACCGGCTCCCCC
TCAGACGCAAAATATCCTCCCTCCTACAGCAACTGTACCATCAAATGCTC
CCCGGCCTGGTCCGCCCCCTCAGCCACAGCATCATGTTCCTCCTCCACCT
CTGCAGCAACCCATTCCTCAGTCCGCCCCCGCTACGGCACCTCCGCTCCA
AGCTCCTACTCCAGTTGGGGCCGGCCCCAATGCCATGGGTCAACAACAAC
CTCACATCAAGACCGAACCTGGCGTCAACGGTCAACCGGGGATGATTCCG
ATGAATAATATGATGATGCCAAACTCCTCCAACCCTCAGTCTGCTCAAGA
ACGGGCTGCCAATATGCTTCGTCAGCGTTACGGCGCAGCAGCCGCTAACT
CGGTCAGTCAGCTGCAAGCACAGTCACAGGCACAAGCAGCCATGGCCATG
CCGGGCCAGCAGCGCCCCCAACCCATGCAGCATGTGCCCAACGGACAGGC
TCCACAGATCAAGCAAGAACCGGGTTACCCCCCTGTGTCTCAACCCCCCG
TCGGCAATACTCAAACGGACGGTGCCGGTGATGATGCCTTGTCTGCATGG
AAGGCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCCAGGGAGGAGA
AGGCGATCGTCTCCTTCGTGAACATCTCAGACAACGGATGCTCCAATTAG
AAGGCGGTGGTCTGATGTTGCCTCTCGACGAGCATGACTACTCATCAAAG
ACATTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAGCTGAGGTATC
AGAAGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTCGGAGCTCAGT
TTGACGGTCCCGGTGGTGATGATGAAAGGGATGAGGATGATGAAGATGCT
ATCAACTCGGACCTTGACGACCCTGATGACCTTGTTGCTGAGGATCATGA
TGCTGAAGATGCCGTAGGCCAGGTCATGCTTTGCACTTACGACAAGGTAC
AACGCGTGAAGAACAAGTGGAAGTGCACACTTAAAGATGGTATTTTGACC
ACCGGTGGCAAGGAGTACGTCTTCCACAAAGGTCAAGGAGAGTTCGAGTG
GTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005672 | transcription factor TFIIA complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006367 | transcription initiation from RNA polymerase II promoter |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010985-T1.utr5p1 | KJC3_010985-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010985-T1.utr3p1 | KJC3_010985-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092651HW |
| DBxref | InterPro:IPR009088 |
| DBxref | InterPro:IPR004855 |
| DBxref | PFAM:PF03153 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4878329..4881457 + |
|
