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KJC3_011024-T1, KJC3_011024-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011024-T1
Unique NameKJC3_011024-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:5008402..5009326+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011024-T1 ID=KJC3_011024-T1|Name=KJC3_011024-T1|organism=Aspergillus niger KJC3|type=mRNA|length=925bp|location=Sequence derived from alignment at ch7:5008402..5009326+ (Aspergillus niger KJC3)
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAA
TGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCC
TCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTAT
TCTGTGGTTTGCCCTCTGTAAGTTGGACTCTATAGTTACGTACTATTGCG
ACAGCGAGACAACAATTCTCGATGCTAATTGCGGTGTGAACTCCAAGCGG
GTACGATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGT
ATGGCATCTGCGCAAGACTTCTTCGGTCAACTATGGAAGGAATATGCCCT
GTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGA
CTATCACGGTCGTAGGTGCACCCGTGGCTGCAGGGACCCCTGCTCATTGT
CTTCCTTAGCTCCGCCTGCGACACTGTTGCTAAACTACTGGAATAGCTTC
TTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCAT
CCTCTGCGCCATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGG
CGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTACGTTCATGACC
GACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTG
ATGAATTTCATCTGGATTGTGGTTCCGTTCTGTACGTTCCCCACGGATCC
CTTGCTTGATTTCCACTCGTCTTGGGCTAATGATGGACATAGACTATCTT
TACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCC
TTCCAGACAGCGCAAGGACCGATAA
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Coding sequence (CDS) from alignment at ch7:5008402..5009326+

>KJC3_011024-T1 ID=KJC3_011024-T1|Name=KJC3_011024-T1|organism=Aspergillus niger KJC3|type=CDS|length=2796bp|location=Sequence derived from alignment at ch7:5008402..5009326+ (Aspergillus niger KJC3)
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAA
TGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCC
TCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTAT
TCTGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATT
TTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA
CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATAC
CCTCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCT
GTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCG
CTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTA
TGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCC
CGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGG
ATTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGA
GGCCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAAA
TGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAAT
GCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCT
CACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCC
TGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATT
CTGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTT
TATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAAC
TATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACC
CTCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCTG
TTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGC
TGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTAT
GCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCC
GGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGA
TTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAG
GCCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAAAT
GACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATG
CTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCTC
ACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCCT
GAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTC
TGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTT
ATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACT
ATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCC
TCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCTGT
TTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGCT
GCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATG
CGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCG
GAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGAT
TGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAGG
CCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAAATG
ACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGC
TCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCTCA
CTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCCTG
AGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCT
GTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTTA
TGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACTA
TGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCT
CGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCTGTT
TTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGCTG
CAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGC
GACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGG
AGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGATT
GTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAACAACGGAGGC
CCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0047750cholestenol delta-isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0016125sterol metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011024KJC3_011024Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011024-T1.exon1KJC3_011024-T1.exon1Aspergillus niger KJC3exon
KJC3_011024-T1.exon2KJC3_011024-T1.exon2Aspergillus niger KJC3exon
KJC3_011024-T1.exon3KJC3_011024-T1.exon3Aspergillus niger KJC3exon
KJC3_011024-T1.exon4KJC3_011024-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011024-T1.cdsKJC3_011024-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011024-T1KJC3_011024-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033118
DBxrefInterPro:IPR007905
DBxrefPFAM:PF05241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:5008402..5009326 +
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