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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5058624..5060411+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011036-T1 ID=KJC3_011036-T1|Name=KJC3_011036-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1788bp|location=Sequence derived from alignment at ch7:5058624..5060411+ (Aspergillus niger KJC3)
CTTTTCTACTCTTGGTTACCACCATTCTTTCTGTAACTACAGTAGGTTTT
TGAACGTAGGTAAGTACATTCTGTTGTTGCTGCTGTCTGGGTAGAGTAAT
GTTTTTGTGTCATGGAATTTTGGACTACTGTGCATGCTAATTGCTACAAA
GTACTGCAATGGACGAGCACGAGCCAGATGAAATCCGCAGCTGGTCTGGC
GATTTCGACCCCCTGGCCGATAATGCCGAGCGTCGTGTGCTCTTTGCTGC
TTTTGATTCTTTCAGGTGAGTCATTTTGTTACGTGCTGCAGGGTCGCGTT
GCTTAAACACAACTCGTGGTAATCCGCTGGCATGTCATCTACGTTGCTTG
CTAAACACGCTCAGGCAATATCGGAGAACGGCGCACATGAACACCACTCA
CCGTCGTCGTCAGGCCTTTTATGCCCTGCCCTCTGCACACTGGCAGATGC
TGGCCGAGCCGCCCTTCTCCATTCTCGACAACTTCAACCGCGTGGACGAC
GCCATCGACGTGAATGCCGACATCGCAGATGCCATTCTGACCACGGGTCT
CTCGTCGTTCGGGCTCTCTGCGAACCCTGATCCCAGTGACCCGCGTCAGA
ACTGGCACGGGACGGCCACCCAGTCCGATGTCAACAAGGCGCACTCCACC
CTGAGACAGTTCTACCGCGACTGGAGCCATGAAGGCCAAGCAGAGCGAGA
TGTCTGCTACGGCCCTGTGCTGTCCGACTTGCAAGATGAGTTCGGGGCGC
GCATTGGCTCCTCCGAAGATGAGGACGAAGTCAGGGTGTTGGTTCCTGGC
GCCGGTCTGGGGAGACTAGTGTTTGAGATCTGTCGGCAAGGGTTCGCCGC
GGAAGGAAACGAGATCTCCTATCATCAGTTGCTGGCGAGTAGCTGGATCC
TGAACCACACGCTCGGCCCTCAGAAACACGCGCTGCATCCCTTTGCGCTG
CATTTCTCGAACCTCCTGTCCCGGGAGCAACAGCTGCAAGAGGTCAAGAT
CCCGGATCAGCATCCGGGTACGGCCATGGTGGAAGCCCAGGCGAACTCGG
CGCCATTTGGGCGGATGAGCATGTCGGCTGCCGACTTTACCGTGCTATAC
ACCAACCCCAGCAATAAGGAGGTGTTTGATGCCGTGGCGACGGTGTTTTT
CATCGACACGGCGCCGAACCTCATCCGATACATCGAGGCGATCCGACACT
GCCTCAAGCCCAACGGCGTCTGGATCAACGTGGGACCGTTATTGTGGCAT
TTCGAGGACGGGAGCAACCGCAGTCAGCACGGAGGCAGTGACGAGGGCCA
CGGTGACCAGGGGATTGGGGAGCCCGGGAATGTGGAGCTGACGGAGGCAG
AAGTGTTCTGCCTCGTGGAGCGAATGGGCTTTGCGATCGAGAAGCGCGAG
GCGCCGGACAGGCGACCCATGTGTGGGTATATCCAGGACCCGGACAGTAT
GTTGCAGCCATTGTATCGGCCGTCGCATTGGGTAGCACGGAAACAGGCCG
TATAAAAGTGATATTCAATGTGTATAATTTTTTCACCTTTTTCCTTGTAG
ATAGATAATGGTAGTGATGAGGATGATGATGATTTAAACAGACCGACCGG
TGTCGGTCGGTAGTTGACTAGTAAGTAAGCAAGCAAGCAAAGAAGAGCTG
TGGGATGTGGGATGTGTCATGAAAGATACCATACCGAAATAAACCAGATC
GGCGATACGGGCACAGATTCTCAGCCGCAGACACGAAACAAAGAAGCAGA
AGGAAACAGTGACAGACAGACGGACAGACAGACAGACG back to topCoding sequence (CDS) from alignment at ch7:5058624..5060411+ >KJC3_011036-T1 ID=KJC3_011036-T1|Name=KJC3_011036-T1|organism=Aspergillus niger KJC3|type=CDS|length=2496bp|location=Sequence derived from alignment at ch7:5058624..5060411+ (Aspergillus niger KJC3)
ATGGACGAGCACGAGCCAGATGAAATCCGCAGCTGGTCTGGCGATTTCGA
CCCCCTGGCCGATAATGCCGAGCGTCGTGTGCTCTTTGCTGCTTTTGATT
CTTTCAGGCAATATCGGAGAACGGCGCACATGAACACCACTCACCGTCGT
CGTCAGGCCTTTTATGCCCTGCCCTCTGCACACTGGCAGATGCTGGCCGA
GCCGCCCTTCTCCATTCTCGACAACTTCAACCGCGTGGACGACGCCATCG
ACGTGAATGCCGACATCGCAGATGCCATTCTGACCACGGGTCTCTCGTCG
TTCGGGCTCTCTGCGAACCCTGATCCCAGTGACCCGCGTCAGAACTGGCA
CGGGACGGCCACCCAGTCCGATGTCAACAAGGCGCACTCCACCCTGAGAC
AGTTCTACCGCGACTGGAGCCATGAAGGCCAAGCAGAGCGAGATGTCTGC
TACGGCCCTGTGCTGTCCGACTTGCAAGATGAGTTCGGGGCGCGCATTGG
CTCCTCCGAAGATGAGGACGAAGTCAGGGTGTTGGTTCCTGGCGCCGGTC
TGGGGAGACTAGTGTTTGAGATCTGTCGGCAAGGGTTCGCCGCGGAAGGA
AACGAGATCTCCTATCATCAGTTGCTGGCGAGTAGCTGGATCCTGAACCA
CACGCTCGGCCCTCAGAAACACGCGCTGCATCCCTTTGCGCTGCATTTCT
CGAACCTCCTGTCCCGGGAGCAACAGCTGCAAGAGGTCAAGATCCCGGAT
CAGCATCCGGGTACGGCCATGGTGGAAGCCCAGGCGAACTCGGCGCCATT
TGGGCGGATGAGCATGTCGGCTGCCGACTTTACCGTGCTATACACCAACC
CCAGCAATAAGGAGGTGTTTGATGCCGTGGCGACGGTGTTTTTCATCGAC
ACGGCGCCGAACCTCATCCGATACATCGAGGCGATCCGACACTGCCTCAA
GCCCAACGGCGTCTGGATCAACGTGGGACCGTTATTGTGGCATTTCGAGG
ACGGGAGCAACCGCAGTCAGCACGGAGGCAGTGACGAGGGCCACGGTGAC
CAGGGGATTGGGGAGCCCGGGAATGTGGAGCTGACGGAGGCAGAAGTGTT
CTGCCTCGTGGAGCGAATGGGCTTTGCGATCGAGAAGCGCGAGGCGCCGG
ACAGGCGACCCATGTGTGGGTATATCCAGGACCCGGACAGTATGTTGCAG
CCATTGTATCGGCCGTCGCATTGGGTAGCACGGAAACAGGCCGTATAAAT
GGACGAGCACGAGCCAGATGAAATCCGCAGCTGGTCTGGCGATTTCGACC
CCCTGGCCGATAATGCCGAGCGTCGTGTGCTCTTTGCTGCTTTTGATTCT
TTCAGGCAATATCGGAGAACGGCGCACATGAACACCACTCACCGTCGTCG
TCAGGCCTTTTATGCCCTGCCCTCTGCACACTGGCAGATGCTGGCCGAGC
CGCCCTTCTCCATTCTCGACAACTTCAACCGCGTGGACGACGCCATCGAC
GTGAATGCCGACATCGCAGATGCCATTCTGACCACGGGTCTCTCGTCGTT
CGGGCTCTCTGCGAACCCTGATCCCAGTGACCCGCGTCAGAACTGGCACG
GGACGGCCACCCAGTCCGATGTCAACAAGGCGCACTCCACCCTGAGACAG
TTCTACCGCGACTGGAGCCATGAAGGCCAAGCAGAGCGAGATGTCTGCTA
CGGCCCTGTGCTGTCCGACTTGCAAGATGAGTTCGGGGCGCGCATTGGCT
CCTCCGAAGATGAGGACGAAGTCAGGGTGTTGGTTCCTGGCGCCGGTCTG
GGGAGACTAGTGTTTGAGATCTGTCGGCAAGGGTTCGCCGCGGAAGGAAA
CGAGATCTCCTATCATCAGTTGCTGGCGAGTAGCTGGATCCTGAACCACA
CGCTCGGCCCTCAGAAACACGCGCTGCATCCCTTTGCGCTGCATTTCTCG
AACCTCCTGTCCCGGGAGCAACAGCTGCAAGAGGTCAAGATCCCGGATCA
GCATCCGGGTACGGCCATGGTGGAAGCCCAGGCGAACTCGGCGCCATTTG
GGCGGATGAGCATGTCGGCTGCCGACTTTACCGTGCTATACACCAACCCC
AGCAATAAGGAGGTGTTTGATGCCGTGGCGACGGTGTTTTTCATCGACAC
GGCGCCGAACCTCATCCGATACATCGAGGCGATCCGACACTGCCTCAAGC
CCAACGGCGTCTGGATCAACGTGGGACCGTTATTGTGGCATTTCGAGGAC
GGGAGCAACCGCAGTCAGCACGGAGGCAGTGACGAGGGCCACGGTGACCA
GGGGATTGGGGAGCCCGGGAATGTGGAGCTGACGGAGGCAGAAGTGTTCT
GCCTCGTGGAGCGAATGGGCTTTGCGATCGAGAAGCGCGAGGCGCCGGAC
AGGCGACCCATGTGTGGGTATATCCAGGACCCGGACAGTATGTTGCAGCC
ATTGTATCGGCCGTCGCATTGGGTAGCACGGAAACAGGCCGTATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011036-T1.utr3p1 | KJC3_011036-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR012901 |
| DBxref | PFAM:PF07942 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5058624..5060411 + |
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