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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5071336..5072855- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011040-T1 ID=KJC3_011040-T1|Name=KJC3_011040-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1520bp|location=Sequence derived from alignment at ch7:5071336..5072855- (Aspergillus niger KJC3)
CCAGGACTTTCTTTTTTGCTTCGCGCATTTCCTGTGTTTCAACTCCTTAC
CTGTCTCGGAGTCAGAGGAATACTAATTATGGCGCAATCAGCGACTCTTT
TCAAACCTCCGCCGTTGGATTCCACCAAGGCGCCCATTGAGAATGTGTTA
GAACTGACACCGGTGATTGACGTGGGGAAAGTATGTCTTTTCCTCCCATT
CCTTTAGTTCTGGCGAATCCAACGGGTTTTTCTCTTTCAACAGGATGTTT
TTACCAATACGCGACCCCTTTGGCATCCGCCTGGAGCGCGAGGCATTTAC
GGTGGTGCTGCCATCGCCCAGTGTCTCGCCGCTGCGCTACGAACCGTTCC
CGCCGATTTCGCCGTCCATAGCATGCACTGTTACTTCCTCCTCGCCGGTG
ACTCCGAGATACCTATATTGTACCACGTGGAACGAGTACGTGATGGAAGG
AGCTATATCACGCGGACGGTACAAGCCAAGCAGCGCGGTCGCCCCATCTT
CACCACAACACTGAGTTTCAACAAGGCCAACAGTGGCGGCAAGAAGAAGC
TTGAGCATGCATCTTCGATGCCAGCTGTCACTCTGCCAGAGGAGCCTGGA
CCGGGATCTAAAAGAAAATTCGAGGAATCGGGTGGTGGGCCATTCGAGTC
ACAGAGAGCGGGTGTTGTAGATCGTCAGTATCTATGGTGTGTCGGTAGAG
CTGGAGATTATATGCTGACTGTCTCAGGAAACCTCCCTCCTCAGGAACGG
AAAACGAGACGCTTCATGCGATCACGGGGCAAGATTTCCGATGCGGGTGG
CCATCAGGCTCATCTGTCTGCCCTTGCATATATGACCGACAGCTATTTCA
TTGGCACCGTGTCCAGGGTCCATAATATTCCTCGGTTCTCCTCCCCAGAG
GAACTTAAGAAGGCACTAAATGCGCTCAAGAACCCGTCTGACCTGGATGA
CGAGGATATCGCGCGTGCTCTTAAGGAGCTGAAGGAAGAGGAAGCGGCAG
ATCTACGCCGTCGCTTGGAAGGCGCTTTGCATAGAGTAACTACTCAGCCA
CCTCAGGAACATAAGGAAGTGGGCATGATGGTCAGTCTTGATCACTCAAT
CCACTTCCATAACCCTTGGGCATTTCGGGCAGACGAATGGATGCTTACAG
AAATGGAGAGCCCTTGGGCTGGCGAGGGACGAGGCTTGGTGTTACAGAAG
ATCTGGTCAAAGGATGGTACTTTGATCGCTACATGCACCCAAGAGGTATG
TGTGTTGAGTGCTTCTACTGAAACGACATGTCTAATTGGGTACTTTATAG
GGAGTCGTGCGTCTCAAACAAGACGAGCCACCTCGGTCTAAGCTTTGACG
ACGAGGACACATGCCGTGGACATCCAGTCGTAGTAGATATACCCGTATTT
TGTCTTTCCGGATAAATAATCTTAGATTGTATAGATTTTGATAATTGTAT
ATAGTATAGTTTGGCAACGAACTGGTCATATGCCATCCTCCGTCAATCTT
CATCGAATTGTTCTGTTGGT back to topCoding sequence (CDS) from alignment at ch7:5071336..5072855- >KJC3_011040-T1 ID=KJC3_011040-T1|Name=KJC3_011040-T1|organism=Aspergillus niger KJC3|type=CDS|length=2601bp|location=Sequence derived from alignment at ch7:5071336..5072855- (Aspergillus niger KJC3)
GGAGTCGTGCGTCTCAAACAAGACGAGCCACCTCGGTCTAAGCTTTGAGA
AACCTCCCTCCTCAGGAACGGAAAACGAGACGCTTCATGCGATCACGGGG
CAAGATTTCCGATGCGGGTGGCCATCAGGCTCATCTGTCTGCCCTTGCAT
ATATGACCGACAGCTATTTCATTGGCACCGTGTCCAGGGTCCATAATATT
CCTCGGTTCTCCTCCCCAGAGGAACTTAAGAAGGCACTAAATGCGCTCAA
GAACCCGTCTGACCTGGATGACGAGGATATCGCGCGTGCTCTTAAGGAGC
TGAAGGAAGAGGAAGCGGCAGATCTACGCCGTCGCTTGGAAGGCGCTTTG
CATAGAGTAACTACTCAGCCACCTCAGGAACATAAGGAAGTGGGCATGAT
GGTCAGTCTTGATCACTCAATCCACTTCCATAACCCTTGGGCATTTCGGG
CAGACGAATGGATGCTTACAGAAATGGAGAGCCCTTGGGCTGGCGAGGGA
CGAGGCTTGGTGTTACAGAAGATCTGGTCAAAGGATGGTACTTTGATCGC
TACATGCACCCAAGAGATGCACTGTTACTTCCTCCTCGCCGGTGACTCCG
AGATACCTATATTGTACCACGTGGAACGAGTACGTGATGGAAGGAGCTAT
ATCACGCGGACGGTACAAGCCAAGCAGCGCGGTCGCCCCATCTTCACCAC
AACACTGAGTTTCAACAAGGCCAACAGTGGCGGCAAGAAGAAGCTTGAGC
ATGCATCTTCGATGCCAGCTGTCACTCTGCCAGAGGAGCCTGGACCGGGA
TCTAAAAGAAAATTCGAGGAATCGGGTGGTGGGCCATTCGAGTCACAGAG
AGCGGGTGTTGTAGATCGGAGTCGTGCGTCTCAAACAAGACGAGCCACCT
CGGTCTAAGCTTTGAGAAACCTCCCTCCTCAGGAACGGAAAACGAGACGC
TTCATGCGATCACGGGGCAAGATTTCCGATGCGGGTGGCCATCAGGCTCA
TCTGTCTGCCCTTGCATATATGACCGACAGCTATTTCATTGGCACCGTGT
CCAGGGTCCATAATATTCCTCGGTTCTCCTCCCCAGAGGAACTTAAGAAG
GCACTAAATGCGCTCAAGAACCCGTCTGACCTGGATGACGAGGATATCGC
GCGTGCTCTTAAGGAGCTGAAGGAAGAGGAAGCGGCAGATCTACGCCGTC
GCTTGGAAGGCGCTTTGCATAGAGTAACTACTCAGCCACCTCAGGAACAT
AAGGAAGTGGGCATGATGGTCAGTCTTGATCACTCAATCCACTTCCATAA
CCCTTGGGCATTTCGGGCAGACGAATGGATGCTTACAGAAATGGAGAGCC
CTTGGGCTGGCGAGGGACGAGGCTTGGTGTTACAGAAGATCTGGTCAAAG
GATGGTACTTTGATCGCTACATGCACCCAAGAGATGCACTGTTACTTCCT
CCTCGCCGGTGACTCCGAGATACCTATATTGTACCACGTGGAACGAGTAC
GTGATGGAAGGAGCTATATCACGCGGACGGTACAAGCCAAGCAGCGCGGT
CGCCCCATCTTCACCACAACACTGAGTTTCAACAAGGCCAACAGTGGCGG
CAAGAAGAAGCTTGAGCATGCATCTTCGATGCCAGCTGTCACTCTGCCAG
AGGAGCCTGGACCGGGATCTAAAAGAAAATTCGAGGAATCGGGTGGTGGG
CCATTCGAGTCACAGAGAGCGGGTGTTGTAGATCGGAGTCGTGCGTCTCA
AACAAGACGAGCCACCTCGGTCTAAGCTTTGAGAAACCTCCCTCCTCAGG
AACGGAAAACGAGACGCTTCATGCGATCACGGGGCAAGATTTCCGATGCG
GGTGGCCATCAGGCTCATCTGTCTGCCCTTGCATATATGACCGACAGCTA
TTTCATTGGCACCGTGTCCAGGGTCCATAATATTCCTCGGTTCTCCTCCC
CAGAGGAACTTAAGAAGGCACTAAATGCGCTCAAGAACCCGTCTGACCTG
GATGACGAGGATATCGCGCGTGCTCTTAAGGAGCTGAAGGAAGAGGAAGC
GGCAGATCTACGCCGTCGCTTGGAAGGCGCTTTGCATAGAGTAACTACTC
AGCCACCTCAGGAACATAAGGAAGTGGGCATGATGGTCAGTCTTGATCAC
TCAATCCACTTCCATAACCCTTGGGCATTTCGGGCAGACGAATGGATGCT
TACAGAAATGGAGAGCCCTTGGGCTGGCGAGGGACGAGGCTTGGTGTTAC
AGAAGATCTGGTCAAAGGATGGTACTTTGATCGCTACATGCACCCAAGAG
ATGCACTGTTACTTCCTCCTCGCCGGTGACTCCGAGATACCTATATTGTA
CCACGTGGAACGAGTACGTGATGGAAGGAGCTATATCACGCGGACGGTAC
AAGCCAAGCAGCGCGGTCGCCCCATCTTCACCACAACACTGAGTTTCAAC
AAGGCCAACAGTGGCGGCAAGAAGAAGCTTGAGCATGCATCTTCGATGCC
AGCTGTCACTCTGCCAGAGGAGCCTGGACCGGGATCTAAAAGAAAATTCG
AGGAATCGGGTGGTGGGCCATTCGAGTCACAGAGAGCGGGTGTTGTAGAT
C back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011040-T1.utr3p1 | KJC3_011040-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011040-T1.utr5p1 | KJC3_011040-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029069 |
| DBxref | PFAM:PF13622 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5071336..5072855 - |
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