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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5125169..5126385+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011062-T1 ID=KJC3_011062-T1|Name=KJC3_011062-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1217bp|location=Sequence derived from alignment at ch7:5125169..5126385+ (Aspergillus niger KJC3)
GCTACATTTATGATCTTTTACGGCGATATGTCTTCGACCTTCTACCGAAA
GCGAGACTTGGATTCAGCCACCGGTAGCAATCCTGGAAACAAGGCCGACC
ATCATCAGGGGAAACGACCCAGGCTTGACAAGCCCTTCACCAGCGGCTTC
GGCTCCGTTCCGGACACAGGCATCTCGCAAGGTTCTCTCGGCACTGAAAA
CCAAGTACACGATGCTTTGAAGCTAAAAGACGGCCAATTCGGCGGCGGAG
GAAGTTCGCCGTTGCCTTATTCGGAGGCTATCCGTGAGTGCATACCTACT
GTCGAGAGGTTCCTTTCCCCGGTCTAACTTTTAAAATCACGCCCAGGTTG
TCCAGAACCACAAGCGCCTCAGCCCAGAAATTTGTCTCCAGATCCTGTCC
AGCATGTCTCCCCGCAATGCCACGGTAGCCACGGCCAGGTCTTGCAGGGC
ACTCGAGGAAACATCGCAGATAATATATGTTTCGGGATGGTACGTGATAT
GGGGTACCTTCTCTTTTTCTCCTCTCTTTCTTCCTCCCTTCGTTTCTCTT
CTTTCTTCCGTCTGGTGTAGCTGACACGGTATAGCTAAGAAATATCCGTA
TTCGAATTGATCCTGCTCAGGATCCGCATTCCTTGAAATTCGGTCAGTCC
TTCGAAATACCTGATACATTTGCTTCGCTAAATCTCTATATACAATGGGA
TCGAGGTGATTTTCTATCAGAACAGGGTATTCCTTTTGCAGCACTAAATA
CTAAAACACACCGTCGACTCAGCTCTGTAAGAGTCCCAGAGCGCCTGACC
TGGCTGGGCGTGATGCCAAAGGATGAACTTCAGAAGAGGATAGAAGCAGC
GGCAGAAATCTTTCCTTCTTCTTTTCCTTTCTTCTTCTCCTCCTCCTCTA
CTACCAATTATTCATCTTTGTTGGCTAAGTGTAATATACGCATTCTCGTC
ATCGGACCCTCTACTATCGGAAGCGCCCTGGCAAGGGAATTTGATCGACT
AAACTTGCAGTTGCACCATCCAGACCCAAAGCCCAAAGACCTCAAGTATC
GCAATCCCCAATGGCTGTACTGGGCGGGGCCACCACTTCTCGACGAGCCG
GGTGAAGGCAGGAGCGAAAATTTCAATGAAGATGACGTCGGCGATAGTCA
AGCGGTCCTTGATGGTTCTTCTCGGCAAATTTTGCGAAACAAGGCGAATG
TCAACAGCTGCAGTTAA back to topCoding sequence (CDS) from alignment at ch7:5125169..5126385+ >KJC3_011062-T1 ID=KJC3_011062-T1|Name=KJC3_011062-T1|organism=Aspergillus niger KJC3|type=CDS|length=3150bp|location=Sequence derived from alignment at ch7:5125169..5126385+ (Aspergillus niger KJC3)
ATGATCTTTTACGGCGATATGTCTTCGACCTTCTACCGAAAGCGAGACTT
GGATTCAGCCACCGGTAGCAATCCTGGAAACAAGGCCGACCATCATCAGG
GGAAACGACCCAGGCTTGACAAGCCCTTCACCAGCGGCTTCGGCTCCGTT
CCGGACACAGGCATCTCGCAAGGTTCTCTCGGCACTGAAAACCAAGTACA
CGATGCTTTGAAGCTAAAAGACGGCCAATTCGGCGGCGGAGGAAGTTCGC
CGTTGCCTTATTCGGAGGCTATCCGTTGTCCAGAACCACAAGCGCCTCAG
CCCAGAAATTTGTCTCCAGATCCTGTCCAGCATGTCTCCCCGCAATGCCA
CGGTAGCCACGGCCAGGTCTTGCAGGGCACTCGAGGAAACATCGCAGATA
ATATATGTTTCGGGATGCTAAGAAATATCCGTATTCGAATTGATCCTGCT
CAGGATCCGCATTCCTTGAAATTCGGTCAGTCCTTCGAAATACCTGATAC
ATTTGCTTCGCTAAATCTCTATATACAATGGGATCGAGGTGATTTTCTAT
CAGAACAGGGTATTCCTTTTGCAGCACTAAATACTAAAACACACCGTCGA
CTCAGCTCTGTAAGAGTCCCAGAGCGCCTGACCTGGCTGGGCGTGATGCC
AAAGGATGAACTTCAGAAGAGGATAGAAGCAGCGGCAGAAATCTTTCCTT
CTTCTTTTCCTTTCTTCTTCTCCTCCTCCTCTACTACCAATTATTCATCT
TTGTTGGCTAAGTGTAATATACGCATTCTCGTCATCGGACCCTCTACTAT
CGGAAGCGCCCTGGCAAGGGAATTTGATCGACTAAACTTGCAGTTGCACC
ATCCAGACCCAAAGCCCAAAGACCTCAAGTATCGCAATCCCCAATGGCTG
TACTGGGCGGGGCCACCACTTCTCGACGAGCCGGGTGAAGGCAGGAGCGA
AAATTTCAATGAAGATGACGTCGGCGATAGTCAAGCGGTCCTTGATGGTT
CTTCTCGGCAAATTTTGCGAAACAAGGCGAATGTCAACAGCTGCAGTTAA
ATGATCTTTTACGGCGATATGTCTTCGACCTTCTACCGAAAGCGAGACTT
GGATTCAGCCACCGGTAGCAATCCTGGAAACAAGGCCGACCATCATCAGG
GGAAACGACCCAGGCTTGACAAGCCCTTCACCAGCGGCTTCGGCTCCGTT
CCGGACACAGGCATCTCGCAAGGTTCTCTCGGCACTGAAAACCAAGTACA
CGATGCTTTGAAGCTAAAAGACGGCCAATTCGGCGGCGGAGGAAGTTCGC
CGTTGCCTTATTCGGAGGCTATCCGTTGTCCAGAACCACAAGCGCCTCAG
CCCAGAAATTTGTCTCCAGATCCTGTCCAGCATGTCTCCCCGCAATGCCA
CGGTAGCCACGGCCAGGTCTTGCAGGGCACTCGAGGAAACATCGCAGATA
ATATATGTTTCGGGATGCTAAGAAATATCCGTATTCGAATTGATCCTGCT
CAGGATCCGCATTCCTTGAAATTCGGTCAGTCCTTCGAAATACCTGATAC
ATTTGCTTCGCTAAATCTCTATATACAATGGGATCGAGGTGATTTTCTAT
CAGAACAGGGTATTCCTTTTGCAGCACTAAATACTAAAACACACCGTCGA
CTCAGCTCTGTAAGAGTCCCAGAGCGCCTGACCTGGCTGGGCGTGATGCC
AAAGGATGAACTTCAGAAGAGGATAGAAGCAGCGGCAGAAATCTTTCCTT
CTTCTTTTCCTTTCTTCTTCTCCTCCTCCTCTACTACCAATTATTCATCT
TTGTTGGCTAAGTGTAATATACGCATTCTCGTCATCGGACCCTCTACTAT
CGGAAGCGCCCTGGCAAGGGAATTTGATCGACTAAACTTGCAGTTGCACC
ATCCAGACCCAAAGCCCAAAGACCTCAAGTATCGCAATCCCCAATGGCTG
TACTGGGCGGGGCCACCACTTCTCGACGAGCCGGGTGAAGGCAGGAGCGA
AAATTTCAATGAAGATGACGTCGGCGATAGTCAAGCGGTCCTTGATGGTT
CTTCTCGGCAAATTTTGCGAAACAAGGCGAATGTCAACAGCTGCAGTTAA
ATGATCTTTTACGGCGATATGTCTTCGACCTTCTACCGAAAGCGAGACTT
GGATTCAGCCACCGGTAGCAATCCTGGAAACAAGGCCGACCATCATCAGG
GGAAACGACCCAGGCTTGACAAGCCCTTCACCAGCGGCTTCGGCTCCGTT
CCGGACACAGGCATCTCGCAAGGTTCTCTCGGCACTGAAAACCAAGTACA
CGATGCTTTGAAGCTAAAAGACGGCCAATTCGGCGGCGGAGGAAGTTCGC
CGTTGCCTTATTCGGAGGCTATCCGTTGTCCAGAACCACAAGCGCCTCAG
CCCAGAAATTTGTCTCCAGATCCTGTCCAGCATGTCTCCCCGCAATGCCA
CGGTAGCCACGGCCAGGTCTTGCAGGGCACTCGAGGAAACATCGCAGATA
ATATATGTTTCGGGATGCTAAGAAATATCCGTATTCGAATTGATCCTGCT
CAGGATCCGCATTCCTTGAAATTCGGTCAGTCCTTCGAAATACCTGATAC
ATTTGCTTCGCTAAATCTCTATATACAATGGGATCGAGGTGATTTTCTAT
CAGAACAGGGTATTCCTTTTGCAGCACTAAATACTAAAACACACCGTCGA
CTCAGCTCTGTAAGAGTCCCAGAGCGCCTGACCTGGCTGGGCGTGATGCC
AAAGGATGAACTTCAGAAGAGGATAGAAGCAGCGGCAGAAATCTTTCCTT
CTTCTTTTCCTTTCTTCTTCTCCTCCTCCTCTACTACCAATTATTCATCT
TTGTTGGCTAAGTGTAATATACGCATTCTCGTCATCGGACCCTCTACTAT
CGGAAGCGCCCTGGCAAGGGAATTTGATCGACTAAACTTGCAGTTGCACC
ATCCAGACCCAAAGCCCAAAGACCTCAAGTATCGCAATCCCCAATGGCTG
TACTGGGCGGGGCCACCACTTCTCGACGAGCCGGGTGAAGGCAGGAGCGA
AAATTTCAATGAAGATGACGTCGGCGATAGTCAAGCGGTCCTTGATGGTT
CTTCTCGGCAAATTTTGCGAAACAAGGCGAATGTCAACAGCTGCAGTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011062-T1.utr5p1 | KJC3_011062-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5125169..5126385 + |
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