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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5211375..5213950+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011093-T1 ID=KJC3_011093-T1|Name=KJC3_011093-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2576bp|location=Sequence derived from alignment at ch7:5211375..5213950+ (Aspergillus niger KJC3)
TGGGATCTTACTCAGTACAGTGCTCATTTATTGTTCAGTTACTGGTGACT
GGCACAGTGAATATTCCACCCACTGACATCAGCCTTACCTACTTGCCTGC
TGGAACGGTATTGTGTCATCTTCTACTCGGTCACACCTGCCTTTCTTCCG
CTCCTGCCACCAACCATTTATGAACATGCCTGGACCCTTTATGCGGAAGA
GTATCGACTCTTTATCAAATCTTATCAGAGGAAATTCGCTACGACGTCGC
CAGAGTCAAGGTCAGGACCAGCACCAGGATCAAGAGCAGTATCAGTACCC
AGATCAAGCTCATACTGATCAAGAAGCATCAAATATGGGCCACTCTCATT
CTCGACAGAGCAGGCATCGTTCCAACTTCTCCGGCTCTGCATCTAGAAGT
CCAGTGTCCCGGTCAACTGGAAAAGCAGCCATGAATAGCAGTCACGCTCC
TGATCCCTGGGCCCCTCCGCCGTATGAATCGCAAACCCCTGCTCCTGCTC
CTTCTATTATCTCGGGGAGCAGTGATTCTCCATACTCTTTCCTGCGAGAT
TTTGATACGATCTTCATCGTGGATGATAGTTCGAGCATGTTGATGGGTAA
CCGCTGGAAGGAGGCCGAAAATGCTATTGCTGCTATCGCACCCATTTGTA
CGCAGTATGATCAGGATGGAATCGACGTCTATTTTCTCAACCACCACCGC
GAAGGAGCTCATAAGGTGAAGGGTGGGTATATGAACATTAAAACAGCAGA
AGATGTTCGTGAGATCTTTGGGAGGGTGTATCCAAACGGCCCGACGCCTT
TTGGCCGACGACTTAACGATATTCTCACTCCGTACATGCGAAACCTGCAG
AAAGCAATTTCAAGGAGCGATGGATCGTGTGATTCGGCCCAACTCATGAA
ACCATTGAACATCATTGCGATTACGGACGGAGAGTTTACAGACGATGCGG
AGAGTGTCATTGCAGGAGTTGCTCAAAAGCTGGACGATAAGGACTATCAA
GCGGTGCCTTGGCAAATCGGGATACAGTTCTTTCAGATCGGAAATGATGC
CCGGGCAAGGGCGTATTTGCAGGAGCTGGATGACAATCTGGCCGAGAGGC
AGAAAAAGGACCGTCTCCGTGATATTGTGGATACTGTGCCGTGGAGGGGT
GATCAGGGGCAGACGCTGAGTGCCGATGGCATTCTAAAGTGCGTACTTGG
CGCCGTGTCCAGAAAGTATGATAAACGCGAAGCGTCGTTTCACTACTGAG
GAGGAAGATCGGCTCTGGTCTTCTCGTGCGCTTGTCCCTTATCATCCACA
CATTCGTTGCCTTCATAGCTTTGCTTTTCTTCGGCCTTTTAGGGGTTGGC
CATGGCTTGAGTCTAGACTCTATCCTTCATCTTCCCGACCCTGTCGTTTG
TGTAACAGCGGCAGGGGTTGGTATGAAACGCGTTGCAGCAAGCGCCGTGT
TGCCGCCGACTTCCCCGAGACCAGAGCCCGTATTAGAATAGGTTTTTGTG
ACTGGTCAATCTTTCTCTGATAGTGAGGATCAAATCGGTTGCTCTCGGCT
CTTTTTGCTTTTTTTCAATGGTGCGTAGAAGGTAATGATTGGCGCTTTAC
CTGTATCTGTGAACTACGAAGCCTAAAGTAGCTGTGGCTCCCCGGGTAGT
CCCGCTAAATTGAACTGTTCACGACTGAGTTAAGTAGGGGTAACCGATTG
GTCAGTCATATCACATCAAGAGGTAAGCCATCTGTCAAAGATGCTGGAGG
CTAGAGGAAATGGTTTACTGTCATTAGCCTTCGACTATTTGCTGCCCTCC
AAACCTTGAATTATGTGGGAGGCCGATCGATCCTAGTTGCTCGGCAGCCG
GGAAGTTAAAGGACGGATACTGACTGGTCGCTGGGATGCAGCCAGAGGCG
CTGAGCAGGCCATTGGGACTTTATCTAAATGAATCAGCGACAGGGAAATT
GATTGGCTGAACAGGGCAGTCCCCTGGGCGCGTAGACGCGCTGGTCCGTG
AGGATGGATCACCGGTCTTGTCCTAGACCCCTGTCCTAGTGCTAGTTCCG
TTAGTCGATGGGAAAACACTGGGTCGGGAGGAGATGGAAATTGACAAATC
ACTTTCGGGTTGACCGGCGGTTCCCTCATGTTGTTGTTGTTGTCGATGTG
TTGTAATCCGGCTGGTCGTCAGGACAATGGGGACAACAGGAGACAATGAA
ACTGGGGGAGATGCAGGAGAACTGCAGCAACAATGGTTTGGCGGCTGCAA
GCAACAGGAGAAGCGACAGGCAGGCAGGCAATCAAGTTCAGCCCTCAGGC
TGCCAGGCACGGTATCGTATCATTGGGTAAGATTGCTTCTTATCTTCGAG
CACCTGCGGGTCTCTCACGTGGCGTGGAGAAATGAGATCGGCGTGTATGC
GTAATGTACTGGATCTCCTCAAGAGTCGACAGAGTCGACTGTCTGTTTTC
ATCCATCAACAATGGAATAAGAGATCTCTTCACGACTGAATCAAACATTG
GACTTGACATGGTGAGAGAGTACAGGGCCAGGCCTTGGCACTGGAAATAG
TCTTTTTCCCCTGTTGCCTTGCAAGG back to topCoding sequence (CDS) from alignment at ch7:5211375..5213950+ >KJC3_011093-T1 ID=KJC3_011093-T1|Name=KJC3_011093-T1|organism=Aspergillus niger KJC3|type=CDS|length=1080bp|location=Sequence derived from alignment at ch7:5211375..5213950+ (Aspergillus niger KJC3)
ATGAACATGCCTGGACCCTTTATGCGGAAGAGTATCGACTCTTTATCAAA
TCTTATCAGAGGAAATTCGCTACGACGTCGCCAGAGTCAAGGTCAGGACC
AGCACCAGGATCAAGAGCAGTATCAGTACCCAGATCAAGCTCATACTGAT
CAAGAAGCATCAAATATGGGCCACTCTCATTCTCGACAGAGCAGGCATCG
TTCCAACTTCTCCGGCTCTGCATCTAGAAGTCCAGTGTCCCGGTCAACTG
GAAAAGCAGCCATGAATAGCAGTCACGCTCCTGATCCCTGGGCCCCTCCG
CCGTATGAATCGCAAACCCCTGCTCCTGCTCCTTCTATTATCTCGGGGAG
CAGTGATTCTCCATACTCTTTCCTGCGAGATTTTGATACGATCTTCATCG
TGGATGATAGTTCGAGCATGTTGATGGGTAACCGCTGGAAGGAGGCCGAA
AATGCTATTGCTGCTATCGCACCCATTTGTACGCAGTATGATCAGGATGG
AATCGACGTCTATTTTCTCAACCACCACCGCGAAGGAGCTCATAAGGTGA
AGGGTGGGTATATGAACATTAAAACAGCAGAAGATGTTCGTGAGATCTTT
GGGAGGGTGTATCCAAACGGCCCGACGCCTTTTGGCCGACGACTTAACGA
TATTCTCACTCCGTACATGCGAAACCTGCAGAAAGCAATTTCAAGGAGCG
ATGGATCGTGTGATTCGGCCCAACTCATGAAACCATTGAACATCATTGCG
ATTACGGACGGAGAGTTTACAGACGATGCGGAGAGTGTCATTGCAGGAGT
TGCTCAAAAGCTGGACGATAAGGACTATCAAGCGGTGCCTTGGCAAATCG
GGATACAGTTCTTTCAGATCGGAAATGATGCCCGGGCAAGGGCGTATTTG
CAGGAGCTGGATGACAATCTGGCCGAGAGGCAGAAAAAGGACCGTCTCCG
TGATATTGTGGATACTGTGCCGTGGAGGGGTGATCAGGGGCAGACGCTGA
GTGCCGATGGCATTCTAAAGTGCGTACTTGGCGCCGTGTCCAGAAAGTAT
GATAAACGCGAAGCGTCGTTTCACTACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011093-T1.utr5p1 | KJC3_011093-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011093-T1.utr3p1 | KJC3_011093-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002035 |
| DBxref | InterPro:IPR036465 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5211375..5213950 + |
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