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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5250827..5252158+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011108-T1 ID=KJC3_011108-T1|Name=KJC3_011108-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1332bp|location=Sequence derived from alignment at ch7:5250827..5252158+ (Aspergillus niger KJC3)
ATGGATACGTTTTCGTCGTCGGACAGTCCGTCCTCCCCCGGCAATCGTAT
TGTGTCCTACCTCCAAACTTTGGCCAAATCCAAGACCGAACTGCCTTACG
GACTGCCTGTGTGTGTGTCTCCCTCTCACACGGTTACCAGCACGGACTCG
CTCCTTCATCTTGCATCCTTGGTCGGCCCCCATATCAGTATCCTCCAGGT
TCACGCAGATATCATCGATGACTGGTCCGAGGAAACGGTTCGCCAATTGA
CCACTCTGGCTAGAAAGCATGGCTTCTTGATCTGGGAAAGCGGTCGAATT
CTCAATTCAACCGTTGACGTTGTCGGTCGGCAGAAGTCTGAATCGAGAGA
AGTACGGAGCGGCGTGGTCGACTTGATACGGAAGAAGTACACCAGGGGTG
TGGTGAAGCCAGCATCATGGGCGGGCATGTCGACAGCCTGGGCTTCGGGA
GCCGCTGTTTACAATCAGGAAGCCGACATCTTGATTCCGACCTTGAAGGC
TGCCGCTCGGGAGGCAGTGGCAGACGCTGTACAGACCATTAGAACCGAAA
TCACCGCCGACAGTTTCGCAAATGAGCATTCTAACAGCGATCAAGACTCG
TCACAATCCCAACATCTTACTGAGTACGCGGTCGACCATAGTGGGCTGGG
ACTGCCCCCACGGAAGGCTTCGACCATTTCCCTTACCCAAACAATCACAC
AGCATACCGAAGATTCCGCCGATTATCCTTTGGAGTCTCCTCAGTTTGAG
CGCCACGGCTTCGAGTTTGGAACTTTGAGTCCATCTACGATACCTGAGGA
TCTTCCTCCCCCGCCTCTTCTGGCTCGTGGTCTAGTACTTTGTTTGCCAT
CCCGGACCGATACATCATTTACCCCCGACTACCGTCAAAGCTGCATAGCT
GCTGCCCGTGCCAATCAAGACTTCGTGGTGGGATTCCTCTGTGGTGAACC
ATGGCACATTACCTCGCAAAGAAGCGATATCTTTGAGACAGGCCTGTCCG
GTTACGGCGATGAGCAGCAGCAGCTTAGCCCATACTCGTCGGATGACGAT
GAGGAGCTTCCACACTTTGCGTTGTTCTCTCCCATCTGCCAAGGTGGACA
GCCGCTGGATGGCAGCGAGGAAGAAGAGGTGGAAGAGGAGGAAGAGACAC
CTCTACCTGAGACCACGATACCAATTGAATCGCTCAACCCTCTTGCCGCG
AAACTGTTCTATGCTGCTGGGAAGGCATTCAAACTCCGCGAAGCAACCAG
CCAGGAAAATGGAATCATGCCGAAATCCGACACCACCAAAAGTTGCCAGA
TCTTGCACATTCCTATCGTCTCGTTGCCGTGA back to topCoding sequence (CDS) from alignment at ch7:5250827..5252158+ >KJC3_011108-T1 ID=KJC3_011108-T1|Name=KJC3_011108-T1|organism=Aspergillus niger KJC3|type=CDS|length=1332bp|location=Sequence derived from alignment at ch7:5250827..5252158+ (Aspergillus niger KJC3)
ATGGATACGTTTTCGTCGTCGGACAGTCCGTCCTCCCCCGGCAATCGTAT
TGTGTCCTACCTCCAAACTTTGGCCAAATCCAAGACCGAACTGCCTTACG
GACTGCCTGTGTGTGTGTCTCCCTCTCACACGGTTACCAGCACGGACTCG
CTCCTTCATCTTGCATCCTTGGTCGGCCCCCATATCAGTATCCTCCAGGT
TCACGCAGATATCATCGATGACTGGTCCGAGGAAACGGTTCGCCAATTGA
CCACTCTGGCTAGAAAGCATGGCTTCTTGATCTGGGAAAGCGGTCGAATT
CTCAATTCAACCGTTGACGTTGTCGGTCGGCAGAAGTCTGAATCGAGAGA
AGTACGGAGCGGCGTGGTCGACTTGATACGGAAGAAGTACACCAGGGGTG
TGGTGAAGCCAGCATCATGGGCGGGCATGTCGACAGCCTGGGCTTCGGGA
GCCGCTGTTTACAATCAGGAAGCCGACATCTTGATTCCGACCTTGAAGGC
TGCCGCTCGGGAGGCAGTGGCAGACGCTGTACAGACCATTAGAACCGAAA
TCACCGCCGACAGTTTCGCAAATGAGCATTCTAACAGCGATCAAGACTCG
TCACAATCCCAACATCTTACTGAGTACGCGGTCGACCATAGTGGGCTGGG
ACTGCCCCCACGGAAGGCTTCGACCATTTCCCTTACCCAAACAATCACAC
AGCATACCGAAGATTCCGCCGATTATCCTTTGGAGTCTCCTCAGTTTGAG
CGCCACGGCTTCGAGTTTGGAACTTTGAGTCCATCTACGATACCTGAGGA
TCTTCCTCCCCCGCCTCTTCTGGCTCGTGGTCTAGTACTTTGTTTGCCAT
CCCGGACCGATACATCATTTACCCCCGACTACCGTCAAAGCTGCATAGCT
GCTGCCCGTGCCAATCAAGACTTCGTGGTGGGATTCCTCTGTGGTGAACC
ATGGCACATTACCTCGCAAAGAAGCGATATCTTTGAGACAGGCCTGTCCG
GTTACGGCGATGAGCAGCAGCAGCTTAGCCCATACTCGTCGGATGACGAT
GAGGAGCTTCCACACTTTGCGTTGTTCTCTCCCATCTGCCAAGGTGGACA
GCCGCTGGATGGCAGCGAGGAAGAAGAGGTGGAAGAGGAGGAAGAGACAC
CTCTACCTGAGACCACGATACCAATTGAATCGCTCAACCCTCTTGCCGCG
AAACTGTTCTATGCTGCTGGGAAGGCATTCAAACTCCGCGAAGCAACCAG
CCAGGAAAATGGAATCATGCCGAAATCCGACACCACCAAAAGTTGCCAGA
TCTTGCACATTCCTATCGTCTCGTTGCCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004590 | orotidine-5'-phosphate decarboxylase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR001754 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5250827..5252158 + |
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