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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5319472..5321671+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011132-T1 ID=KJC3_011132-T1|Name=KJC3_011132-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2200bp|location=Sequence derived from alignment at ch7:5319472..5321671+ (Aspergillus niger KJC3)
TGATAAGGTACCGTCGGGTCCATGGTCCTGAATTATATGAACCTCTCAAA
GTCGAGAGAGGCTAACGAGTGATTTGATTGCCAGTGGAAGCCGCACCGGC
CAATCCTGACCCAGAAGCTGCTGCTATAAATGGCCAGGACACCCTCACAT
TTCATCATTGCAATAGCCTGAAAGGGGAGGGGGATGTCCATCAAACACGA
ACCACCGATAAATGAGAACCTTCCCCGCAGTCCGAGCGGACGATCGGCGA
CGATCCCCTGGCAAGAACCACGGGTCGGCCAGCGACACCCCTGAGACTCC
TGCAAGTCGCTATCGAGATCCGAGGTTTCTCGATTGTCTCAAAGACGGGG
AGTTTCATATGCAACTGGCCCGGCTGCCGTCGCATGACAAACAACGATGC
TACATAAGCAGATCGTAACCCACCGTCCCATTTGAAACTCCATGACTGAA
TTCTACACTCAACTTCACCCATCATGACTACCAACGGCATTCAACCCGGC
CACGTCGGCAATCTGACTCAGGATCAAGAGGCCAAATTACAACAGCTCTG
GTCCATTGTCCTTACTCTGCTGGACGTGAAGTCCCTACAAAGTGGAGATG
CCTCGGCACAGACCCAGCCCGATCAGCGTCCAAGCACGTCGCTCTCCCGA
GCCGACACCGTCGTTTCCGCTCATGGCCAGACGGCTTTCACAGAAGACTT
GTCCCGAGTCCTCCGGGAGAATGGTATGAGCAACCCTGACATTAAGTCCG
TCCGGGAGGCCCTGAGTGACACCTCGATCGACGACCTTCGCTCGGGTCTG
TTGTACACTGCCAAACATGACTCCCCTGACGTCCTCCTACTTCGCTTCTT
ACGCGCTCGCAAGTGGGACGTCAGCAAGGCCTTCGGGATGATGTTGAAGG
CGCTCGTCTGGCGCAAGGATCAGCACGTCGACGACAAGGTGATTGCGAAC
CCTGAACTTGCCGCATTAGTCACGTCGCAGAACACGGTGGACACGCACGC
GGCCAAGGAGTGCAAGGACTTCTTGGACCAAATGCGTATGGGGAAATGTT
ATATGCACGGAACCGACCGGGATGGCCGACCTGTTCTCGTGGTGCGCGTT
CGCTTCCATCAACCCTCAAAACAGAGCGAGGCAGTGATCAATCGATTCAT
CCTTCATACGATCGAGACAGTCCGGTTATTGCTGGCGCCTCCCCAGGAGA
CAGTGGTACGTCTATCCATCTTTTGTTTCCATGGGCTCCCACGGGTTGTA
TCCCGCTAATGATCCATGTGGCAGACCATCATCTTCGACATGACTGGCTT
TGGCCTCTCGAACATGGTAAGTTGCTCTGCAAATCAGGGATATACGCACG
GGGAACTGACCATGACCAGGAATATGCACCGGTGAAATTCATCATCGAGT
GTTTCCAGGAGAACTACCCTGAGTCGCTGGGATACATGCTTATCCACAAC
GCTCCTTGGGTCTTCTCTGGTATGTTTGCACCCCTCGCCCCTTTACTCTG
CCGGGTCTAATGAAGCGATAGGAATTTGGAAGATCATCAAGGGGTGGATG
GACCCGGTGATTGTGTCGAAAGTGAACTTCACCAACAAGGTGTCCGATCT
GGAGAAGTTCATTGCCCCGGAGCAGATTGTGAAAGAGCTGAAGGGCAAGG
AAGACTGGACCTATGAATACGTCGAGCCGGTTGCCGGCGAGAACGAGCTG
ATGGCGGATACGGAAACCCGCGACCGCATTTACAGCGAGCGGTTGAAGAT
TGGTGAGGAGCTGCTGCTGCGGACCTCGGAATGGGTCTCCACCAGCCAGC
GAAAGGACGCGGCCGCTGCCACAACGGCCCGAGAACGACGGAGCGAGACG
ATCGAATCGCTGCGCCAGAACTACTGGGAGCTGGATCCGTATGTGCGCGG
GCGCACGTTCCTGGACCGGACGGGAGTAGTCAAGAAGGGGGGCAAGATTG
ACTTTTACCCCAGCCCCGATTTGGAGCCCGCCACGGCTAAGATGCTGGAA
GTGGAGCATTTTGAGCGAGCTCAGGTCAAGGTGGTGGATATGCAATGATT
GATTGTTTCCTTTGTTAGGTTCATGGCGTCAGGTTCGGAAGTAATGCTCT
TGTGGGACGTGGATTATTATAGTTACTTAAATTACACATTTTCTTAACAC
ATGCATAAGACCCGATACATATAGGTCATAGATTTCTATCAAGATGGCAG
back to topCoding sequence (CDS) from alignment at ch7:5319472..5321671+ >KJC3_011132-T1 ID=KJC3_011132-T1|Name=KJC3_011132-T1|organism=Aspergillus niger KJC3|type=CDS|length=5604bp|location=Sequence derived from alignment at ch7:5319472..5321671+ (Aspergillus niger KJC3)
ATGACTACCAACGGCATTCAACCCGGCCACGTCGGCAATCTGACTCAGGA
TCAAGAGGCCAAATTACAACAGCTCTGGTCCATTGTCCTTACTCTGCTGG
ACGTGAAGTCCCTACAAAGTGGAGATGCCTCGGCACAGACCCAGCCCGAT
CAGCGTCCAAGCACGTCGCTCTCCCGAGCCGACACCGTCGTTTCCGCTCA
TGGCCAGACGGCTTTCACAGAAGACTTGTCCCGAGTCCTCCGGGAGAATG
GTATGAGCAACCCTGACATTAAGTCCGTCCGGGAGGCCCTGAGTGACACC
TCGATCGACGACCTTCGCTCGGGTCTGTTGTACACTGCCAAACATGACTC
CCCTGACGTCCTCCTACTTCGCTTCTTACGCGCTCGCAAGTGGGACGTCA
GCAAGGCCTTCGGGATGATGTTGAAGGCGCTCGTCTGGCGCAAGGATCAG
CACGTCGACGACAAGGTGATTGCGAACCCTGAACTTGCCGCATTAGTCAC
GTCGCAGAACACGGTGGACACGCACGCGGCCAAGGAGTGCAAGGACTTCT
TGGACCAAATGCGTATGGGGAAATGTTATATGCACGGAACCGACCGGGAT
GGCCGACCTGTTCTCGTGGTGCGCGTTCGCTTCCATCAACCCTCAAAACA
GAGCGAGGCAGTGATCAATCGATTCATCCTTCATACGATCGAGACAGTCC
GGTTATTGCTGGCGCCTCCCCAGGAGACAGTGACCATCATCTTCGACATG
ACTGGCTTTGGCCTCTCGAACATGGAATATGCACCGGTGAAATTCATCAT
CGAGTGTTTCCAGGAGAACTACCCTGAGTCGCTGGGATACATGCTTATCC
ACAACGCTCCTTGGGTCTTCTCTGGAATTTGGAAGATCATCAAGGGGTGG
ATGGACCCGGTGATTGTGTCGAAAGTGAACTTCACCAACAAGGTGTCCGA
TCTGGAGAAGTTCATTGCCCCGGAGCAGATTGTGAAAGAGCTGAAGGGCA
AGGAAGACTGGACCTATGAATACGTCGAGCCGGTTGCCGGCGAGAACGAG
CTGATGGCGGATACGGAAACCCGCGACCGCATTTACAGCGAGCGGTTGAA
GATTGGTGAGGAGCTGCTGCTGCGGACCTCGGAATGGGTCTCCACCAGCC
AGCGAAAGGACGCGGCCGCTGCCACAACGGCCCGAGAACGACGGAGCGAG
ACGATCGAATCGCTGCGCCAGAACTACTGGGAGCTGGATCCGTATGTGCG
CGGGCGCACGTTCCTGGACCGGACGGGAGTAGTCAAGAAGGGGGGCAAGA
TTGACTTTTACCCCAGCCCCGATTTGGAGCCCGCCACGGCTAAGATGCTG
GAAGTGGAGCATTTTGAGCGAGCTCAGGTCAAGGTGGTGGATATGCAATG
AATGACTACCAACGGCATTCAACCCGGCCACGTCGGCAATCTGACTCAGG
ATCAAGAGGCCAAATTACAACAGCTCTGGTCCATTGTCCTTACTCTGCTG
GACGTGAAGTCCCTACAAAGTGGAGATGCCTCGGCACAGACCCAGCCCGA
TCAGCGTCCAAGCACGTCGCTCTCCCGAGCCGACACCGTCGTTTCCGCTC
ATGGCCAGACGGCTTTCACAGAAGACTTGTCCCGAGTCCTCCGGGAGAAT
GGTATGAGCAACCCTGACATTAAGTCCGTCCGGGAGGCCCTGAGTGACAC
CTCGATCGACGACCTTCGCTCGGGTCTGTTGTACACTGCCAAACATGACT
CCCCTGACGTCCTCCTACTTCGCTTCTTACGCGCTCGCAAGTGGGACGTC
AGCAAGGCCTTCGGGATGATGTTGAAGGCGCTCGTCTGGCGCAAGGATCA
GCACGTCGACGACAAGGTGATTGCGAACCCTGAACTTGCCGCATTAGTCA
CGTCGCAGAACACGGTGGACACGCACGCGGCCAAGGAGTGCAAGGACTTC
TTGGACCAAATGCGTATGGGGAAATGTTATATGCACGGAACCGACCGGGA
TGGCCGACCTGTTCTCGTGGTGCGCGTTCGCTTCCATCAACCCTCAAAAC
AGAGCGAGGCAGTGATCAATCGATTCATCCTTCATACGATCGAGACAGTC
CGGTTATTGCTGGCGCCTCCCCAGGAGACAGTGACCATCATCTTCGACAT
GACTGGCTTTGGCCTCTCGAACATGGAATATGCACCGGTGAAATTCATCA
TCGAGTGTTTCCAGGAGAACTACCCTGAGTCGCTGGGATACATGCTTATC
CACAACGCTCCTTGGGTCTTCTCTGGAATTTGGAAGATCATCAAGGGGTG
GATGGACCCGGTGATTGTGTCGAAAGTGAACTTCACCAACAAGGTGTCCG
ATCTGGAGAAGTTCATTGCCCCGGAGCAGATTGTGAAAGAGCTGAAGGGC
AAGGAAGACTGGACCTATGAATACGTCGAGCCGGTTGCCGGCGAGAACGA
GCTGATGGCGGATACGGAAACCCGCGACCGCATTTACAGCGAGCGGTTGA
AGATTGGTGAGGAGCTGCTGCTGCGGACCTCGGAATGGGTCTCCACCAGC
CAGCGAAAGGACGCGGCCGCTGCCACAACGGCCCGAGAACGACGGAGCGA
GACGATCGAATCGCTGCGCCAGAACTACTGGGAGCTGGATCCGTATGTGC
GCGGGCGCACGTTCCTGGACCGGACGGGAGTAGTCAAGAAGGGGGGCAAG
ATTGACTTTTACCCCAGCCCCGATTTGGAGCCCGCCACGGCTAAGATGCT
GGAAGTGGAGCATTTTGAGCGAGCTCAGGTCAAGGTGGTGGATATGCAAT
GAATGACTACCAACGGCATTCAACCCGGCCACGTCGGCAATCTGACTCAG
GATCAAGAGGCCAAATTACAACAGCTCTGGTCCATTGTCCTTACTCTGCT
GGACGTGAAGTCCCTACAAAGTGGAGATGCCTCGGCACAGACCCAGCCCG
ATCAGCGTCCAAGCACGTCGCTCTCCCGAGCCGACACCGTCGTTTCCGCT
CATGGCCAGACGGCTTTCACAGAAGACTTGTCCCGAGTCCTCCGGGAGAA
TGGTATGAGCAACCCTGACATTAAGTCCGTCCGGGAGGCCCTGAGTGACA
CCTCGATCGACGACCTTCGCTCGGGTCTGTTGTACACTGCCAAACATGAC
TCCCCTGACGTCCTCCTACTTCGCTTCTTACGCGCTCGCAAGTGGGACGT
CAGCAAGGCCTTCGGGATGATGTTGAAGGCGCTCGTCTGGCGCAAGGATC
AGCACGTCGACGACAAGGTGATTGCGAACCCTGAACTTGCCGCATTAGTC
ACGTCGCAGAACACGGTGGACACGCACGCGGCCAAGGAGTGCAAGGACTT
CTTGGACCAAATGCGTATGGGGAAATGTTATATGCACGGAACCGACCGGG
ATGGCCGACCTGTTCTCGTGGTGCGCGTTCGCTTCCATCAACCCTCAAAA
CAGAGCGAGGCAGTGATCAATCGATTCATCCTTCATACGATCGAGACAGT
CCGGTTATTGCTGGCGCCTCCCCAGGAGACAGTGACCATCATCTTCGACA
TGACTGGCTTTGGCCTCTCGAACATGGAATATGCACCGGTGAAATTCATC
ATCGAGTGTTTCCAGGAGAACTACCCTGAGTCGCTGGGATACATGCTTAT
CCACAACGCTCCTTGGGTCTTCTCTGGAATTTGGAAGATCATCAAGGGGT
GGATGGACCCGGTGATTGTGTCGAAAGTGAACTTCACCAACAAGGTGTCC
GATCTGGAGAAGTTCATTGCCCCGGAGCAGATTGTGAAAGAGCTGAAGGG
CAAGGAAGACTGGACCTATGAATACGTCGAGCCGGTTGCCGGCGAGAACG
AGCTGATGGCGGATACGGAAACCCGCGACCGCATTTACAGCGAGCGGTTG
AAGATTGGTGAGGAGCTGCTGCTGCGGACCTCGGAATGGGTCTCCACCAG
CCAGCGAAAGGACGCGGCCGCTGCCACAACGGCCCGAGAACGACGGAGCG
AGACGATCGAATCGCTGCGCCAGAACTACTGGGAGCTGGATCCGTATGTG
CGCGGGCGCACGTTCCTGGACCGGACGGGAGTAGTCAAGAAGGGGGGCAA
GATTGACTTTTACCCCAGCCCCGATTTGGAGCCCGCCACGGCTAAGATGC
TGGAAGTGGAGCATTTTGAGCGAGCTCAGGTCAAGGTGGTGGATATGCAA
TGAATGACTACCAACGGCATTCAACCCGGCCACGTCGGCAATCTGACTCA
GGATCAAGAGGCCAAATTACAACAGCTCTGGTCCATTGTCCTTACTCTGC
TGGACGTGAAGTCCCTACAAAGTGGAGATGCCTCGGCACAGACCCAGCCC
GATCAGCGTCCAAGCACGTCGCTCTCCCGAGCCGACACCGTCGTTTCCGC
TCATGGCCAGACGGCTTTCACAGAAGACTTGTCCCGAGTCCTCCGGGAGA
ATGGTATGAGCAACCCTGACATTAAGTCCGTCCGGGAGGCCCTGAGTGAC
ACCTCGATCGACGACCTTCGCTCGGGTCTGTTGTACACTGCCAAACATGA
CTCCCCTGACGTCCTCCTACTTCGCTTCTTACGCGCTCGCAAGTGGGACG
TCAGCAAGGCCTTCGGGATGATGTTGAAGGCGCTCGTCTGGCGCAAGGAT
CAGCACGTCGACGACAAGGTGATTGCGAACCCTGAACTTGCCGCATTAGT
CACGTCGCAGAACACGGTGGACACGCACGCGGCCAAGGAGTGCAAGGACT
TCTTGGACCAAATGCGTATGGGGAAATGTTATATGCACGGAACCGACCGG
GATGGCCGACCTGTTCTCGTGGTGCGCGTTCGCTTCCATCAACCCTCAAA
ACAGAGCGAGGCAGTGATCAATCGATTCATCCTTCATACGATCGAGACAG
TCCGGTTATTGCTGGCGCCTCCCCAGGAGACAGTGACCATCATCTTCGAC
ATGACTGGCTTTGGCCTCTCGAACATGGAATATGCACCGGTGAAATTCAT
CATCGAGTGTTTCCAGGAGAACTACCCTGAGTCGCTGGGATACATGCTTA
TCCACAACGCTCCTTGGGTCTTCTCTGGAATTTGGAAGATCATCAAGGGG
TGGATGGACCCGGTGATTGTGTCGAAAGTGAACTTCACCAACAAGGTGTC
CGATCTGGAGAAGTTCATTGCCCCGGAGCAGATTGTGAAAGAGCTGAAGG
GCAAGGAAGACTGGACCTATGAATACGTCGAGCCGGTTGCCGGCGAGAAC
GAGCTGATGGCGGATACGGAAACCCGCGACCGCATTTACAGCGAGCGGTT
GAAGATTGGTGAGGAGCTGCTGCTGCGGACCTCGGAATGGGTCTCCACCA
GCCAGCGAAAGGACGCGGCCGCTGCCACAACGGCCCGAGAACGACGGAGC
GAGACGATCGAATCGCTGCGCCAGAACTACTGGGAGCTGGATCCGTATGT
GCGCGGGCGCACGTTCCTGGACCGGACGGGAGTAGTCAAGAAGGGGGGCA
AGATTGACTTTTACCCCAGCCCCGATTTGGAGCCCGCCACGGCTAAGATG
CTGGAAGTGGAGCATTTTGAGCGAGCTCAGGTCAAGGTGGTGGATATGCA
ATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011132-T1.utr5p1 | KJC3_011132-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011132-T1.utr3p1 | KJC3_011132-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036273 |
| DBxref | InterPro:IPR036865 |
| DBxref | InterPro:IPR001251 |
| DBxref | InterPro:IPR011074 |
| DBxref | PFAM:PF03765 |
| DBxref | PFAM:PF13716 |
| DBxref | PFAM:PF00650 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5319472..5321671 + |
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