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KJC3_011146-T1, KJC3_011146-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011146-T1
Unique NameKJC3_011146-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:5351440..5352606+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011146-T1 ID=KJC3_011146-T1|Name=KJC3_011146-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1167bp|location=Sequence derived from alignment at ch7:5351440..5352606+ (Aspergillus niger KJC3)
ATGCCCTCAGCCATCAGTATTGGAGTGATCGCGGGCCTGAGTGTCGCTGC
TTCGGCCGTACCTTCTCTCCAGAAGAATGGCACTACCTGCACCGTCATCC
CTTTAGGAAACGGACAGGATGATGTCCCCAACATCCTCTCGGCCGTTGAC
GAATGTGGCCAGACCTCTGGAGGGAGAGTTGTTCTCCCAGCGCCGTATAC
CTACCGAATTAACCAACGGATGACGACTCACCTGACCGATTCCCGACTCG
AGATCGGTGGTACGCTTCTCTTCAGCGACGATATCGACTACTGGGTCAAC
AACTCCTACCGGGTGGACTTTCAGAACCAGTCAAGTGCCTGGCGTATCAC
GGGTCATGACTATGTTGTGGATGGAGGTCCACGTCAAGGTGGAGTGGATG
GGAATGGACAGCTGTGGTACACTTGGGCCAAGGGAGGAAGCAATGTCTTC
GGACGACCGATGCCAGTGCATGTGTTCGAGTCGACGCGAGCAACCCTGCG
TAACCTGGCAATCCGGCAGCCTCAGTTTTGGGCTGTTCTTGTCGATTCCT
CTTCGCATATCAACCTCGATAATTTTTACGTGAATGCCACAAACCATGAC
TCCTCGGTGAGCCCAGAGGGCGAGTGGGTGCAGAATACGGATGGGATCGA
CACGTACCGATCCGACCATATTACGGTTACCAACTGGGTGTACCAAGGCG
GAGACGATGCAGTGGCTTTTCAAAGGGAACTCGACGAACATACATGTAGA
GAATGTCACGGTTTACGGCGGACCGGGCATCGCTTTTGGGTCGCTGGGAC
AATACCCCGACCGGACGGATATTGTGGAGAATGTGACGGTTCGGAATGTT
CGAGTAAGTAAGGCTCAGAGGCATGATGACATTTGAATTCACAGGTATAG
GTGCAACCGTCCTTCCAACGGGCGATGAATTCCGGGGTTTACTTCAAGAG
CTGGTAGGTACCATGTCCTTCACAGCGATCCCTGGCTGACCAGCTAGGAT
CGGGGTCAATTATGGTGTTCCTCCGAATGGTGGGGGGGGCGGCCATGGAT
ACGTGCGCAACGTCTCAGTCGAAAACCTTCGACTCAAGGATGTGCAGTTA
CCTGTGTATATTGACACCTGGTGAGGGCGATACCACCATGTTTGAGGTAC
TCGGCTAACCCGGGCAG
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Coding sequence (CDS) from alignment at ch7:5351440..5352606+

>KJC3_011146-T1 ID=KJC3_011146-T1|Name=KJC3_011146-T1|organism=Aspergillus niger KJC3|type=CDS|length=1884bp|location=Sequence derived from alignment at ch7:5351440..5352606+ (Aspergillus niger KJC3)
ATGCCCTCAGCCATCAGTATTGGAGTGATCGCGGGCCTGAGTGTCGCTGC
TTCGGCCGTACCTTCTCTCCAGAAGAATGGCACTACCTGCACCGTCATCC
CTTTAGGAAACGGACAGGATGATGTCCCCAACATCCTCTCGGCCGTTGAC
GAATGTGGCCAGACCTCTGGAGGGAGAGTTGTTCTCCCAGCGCCGTATAC
CTACCGAATTAACCAACGGATGACGACTCACCTGACCGATTCCCGACTCG
AGATCGGTGGTACGCTTCTCTTCAGCGACGATATCGACTACTGGGTCAAC
AACTCCTACCGGGTGGACTTTCAGAACCAGTCAAGTGCCTGGCGTATCAC
GGGTCATGACTATGTTGTGGATGGAGGTCCACGTCAAGGTGGAGTGGATG
GGAATGGACAGCTGTGGTACACTTGGGCCAAGGGAGGAAGCAATGTCTTC
GGACGACCGATGCCAGTGCATGTGTTCGAGTCGACGCGAGCAACCCTGCG
TAACCTGGCAATCCGGCAGCCTCAGTTTTGGGCTGTTCTTGTCGATTCCT
CTTCGCATATCAACCTCGATAATTTTTACGTGAATGCCACAAACCATGAC
TCCTCGGTGAGCCCAGAGGGCGAGTGGGTGCAGAATACGGATGGGATCGA
CACGTACCGATCCGACCATATTACGGTTACCAACTGGGTGTACCAAGGCG
GAGACGATGCAGTGGCTTTTCAAAGGGAACTCGACGAACATACATGTAGA
GAATGTCACGGTTTACGGCGGACCGGGCATCGCTTTTGGGTCGCTGGGAC
AATACCCCGACCGGACGGATATTGTGGAGAATGTGACGGTTCGGAATGTT
CGAGTGCAACCGTCCTTCCAACGGGCGATGAATTCCGGGGTTTACTTCAA
GAGCTGGTAGGTACCATGTCCTTCACAGCGATCCCTGGCTGAATGCCCTC
AGCCATCAGTATTGGAGTGATCGCGGGCCTGAGTGTCGCTGCTTCGGCCG
TACCTTCTCTCCAGAAGAATGGCACTACCTGCACCGTCATCCCTTTAGGA
AACGGACAGGATGATGTCCCCAACATCCTCTCGGCCGTTGACGAATGTGG
CCAGACCTCTGGAGGGAGAGTTGTTCTCCCAGCGCCGTATACCTACCGAA
TTAACCAACGGATGACGACTCACCTGACCGATTCCCGACTCGAGATCGGT
GGTACGCTTCTCTTCAGCGACGATATCGACTACTGGGTCAACAACTCCTA
CCGGGTGGACTTTCAGAACCAGTCAAGTGCCTGGCGTATCACGGGTCATG
ACTATGTTGTGGATGGAGGTCCACGTCAAGGTGGAGTGGATGGGAATGGA
CAGCTGTGGTACACTTGGGCCAAGGGAGGAAGCAATGTCTTCGGACGACC
GATGCCAGTGCATGTGTTCGAGTCGACGCGAGCAACCCTGCGTAACCTGG
CAATCCGGCAGCCTCAGTTTTGGGCTGTTCTTGTCGATTCCTCTTCGCAT
ATCAACCTCGATAATTTTTACGTGAATGCCACAAACCATGACTCCTCGGT
GAGCCCAGAGGGCGAGTGGGTGCAGAATACGGATGGGATCGACACGTACC
GATCCGACCATATTACGGTTACCAACTGGGTGTACCAAGGCGGAGACGAT
GCAGTGGCTTTTCAAAGGGAACTCGACGAACATACATGTAGAGAATGTCA
CGGTTTACGGCGGACCGGGCATCGCTTTTGGGTCGCTGGGACAATACCCC
GACCGGACGGATATTGTGGAGAATGTGACGGTTCGGAATGTTCGAGTGCA
ACCGTCCTTCCAACGGGCGATGAATTCCGGGGTTTACTTCAAGAGCTGGT
AGGTACCATGTCCTTCACAGCGATCCCTGGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011146KJC3_011146Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011146-T1.exon1KJC3_011146-T1.exon1Aspergillus niger KJC3exon
KJC3_011146-T1.exon2KJC3_011146-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011146-T1.cdsKJC3_011146-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011146-T1.utr3p1KJC3_011146-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011146-T1KJC3_011146-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:5351440..5352606 +
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