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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5357948..5359838- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011149-T1 ID=KJC3_011149-T1|Name=KJC3_011149-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1891bp|location=Sequence derived from alignment at ch7:5357948..5359838- (Aspergillus niger KJC3)
CGGACAATGGAGTCCTCAGGGGCAACATACTACAGTGACGGCTGCCTCAA
GTACAGTGACCGGTATAATTTCCCACCACTCATCGCTGCACGCCCCGGGT
AACCGGATGAGGTTTACTGAAGGCATTGCGCGTCAGGCACGGGAAATATA
GTGTGGCGCTCCGTGGGGAGACAGAGGCACGCAGAAGTCCTGCAGAAACT
ATCACATTGTCCCGCGCGCTACGGCAGTTCTTCCGCCGGAGCTGCGAAGT
GCCGTCCACAGAAAGCCGGGAGATATTCCACCACAGAGACAGCAGAGATG
CCCCAATGATACATTCAATGGGTATAAAACGCACTTATTCCGCCAGCCAA
GAAAGCCCAAGAGGAACCAAGACATTGACTAAAAGCTTGTCTCAAACCTT
GATCTGCGAGTGTCTTCAACATGGTGACTTCTAGCTCGGTGATCGGCCTA
ACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCCGCTGGT
GACCCCCGCCCCGAAGCTCGAGGATCTGGAGAAGCGCGCAACCTCCTGCA
CTTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAGACCTCG
TGCTCCACCATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCACCACGTT
GGATCTGACCGATCTGAACGACGGGACTCACGTAAGTTACTGCGCCTCGA
CGCGCGATTCTTCGCATCTCACAATGAACAGGTCATCTTCGAAGGCGAAA
CCACCTTCGGTTACGAGGAATGGAGCGGACCTCTTGTCTCAGTCTCCGGA
ACTGACATCACCGTCACCGGGGCCGACGGCGCCTATCTCAACGGTGACGG
CAGTCGTTGGTGGGATGGCGAGGGCAGCAATGGCGGCAAGACGAAGCCCA
AGTTCTTCTACGCCCATGATCTGACCTCGTCCACGATCAGCGGTATCTAC
ATCCAGAACTCGCCGGTGCAGGTGTTCAGCATTGACGGGTCGACGTATCT
TACTATGGAGGACATCACCATTGACAACACGGATGGCGATGATGGCGAGG
CGGCCAACACCGATGGATTTGACATTGGCGATAGCACGTACATTACCATC
ACGGGCGCCAATGTATACAACCAAGATGACTGTGTGGCGGTGAACTCGGG
CGAGGTGGGTAGACCGTCCTTTAAGCTACGGATGTGGACACTGATGGGAA
CCAGAACATTTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACGGGCTGT
CGATCGGTTCCGTTGGCGGTCGGAGTGACAACACCGTGAAGAACGTTACC
TTCTACGATTCGGAGATCAAGAGCTCTCAGAACGGTAAGTTATATTCCGT
CAAGGTTGTAGTTCGGTGCGATCACATGCTAAGCGGCGTATAGGAGTCCG
CATCAAGACCATCTACGGCGACACTGGGTCGGTCAGTGAGGTCACCTACA
AGGAGATCACCCTGTCCGATATCACCGACTATGGCATTGTGGTGGAGCAG
AACTATGACGATACGAGCGAGTCGCCGACCGATGGAATCACCATCGAAGA
CTTTGTCCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGGCACCAACA
TCTACATCGTCTGCGGATCAGACAGCTGCACGGACTGGACTTGGACGGAT
GTGGATGTGACTGGAGGGAAGACCAGCTCCGACTGTGAGAATGTGCCGGA
CGATATCAGCTGTTAGCAGCTGGGCAGGACTATGGGGGTAACAAGCTGTA
TTATTTGAGAGTATTGTTGAGAGAAGAGTGGATTGAGTTGACTAGGAGAC
AATGTAGGTTTTGATCTGCAACCATGGACTATCGTTCTTTGTGTCTCAAT
GGATAGCAGTCGATCATTGATGAATGCTGCTATGATCATCA back to topCoding sequence (CDS) from alignment at ch7:5357948..5359838- >KJC3_011149-T1 ID=KJC3_011149-T1|Name=KJC3_011149-T1|organism=Aspergillus niger KJC3|type=CDS|length=4548bp|location=Sequence derived from alignment at ch7:5357948..5359838- (Aspergillus niger KJC3)
GAGTCCGCATCAAGACCATCTACGGCGACACTGGGTCGGTCAGTGAGGTC
ACCTACAAGGAGATCACCCTGTCCGATATCACCGACTATGGCATTGTGGT
GGAGCAGAACTATGACGATACGAGCGAGTCGCCGACCGATGGAATCACCA
TCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGGC
ACCAACATCTACATCGTCTGCGGATCAGACAGCTGCACGGACTGGACTTG
GACGGATGTGGATGTGACTGGAGGGAAGACCAGCTCCGACTGTGAGAATG
TGCCGGACGATATCAGCTGTTAGAACATTTACTTTTCGGGCGGCGTCTGC
TCTGGTGGCCACGGGCTGTCGATCGGTTCCGTTGGCGGTCGGAGTGACAA
CACCGTGAAGAACGTTACCTTCTACGATTCGGAGATCAAGAGCTCTCAGA
ACGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAATGGAGCGG
ACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGGGGCCGACG
GCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCGAGGGCAGC
AATGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGATCTGACCTC
GTCCACGATCAGCGGTATCTACATCCAGAACTCGCCGGTGCAGGTGTTCA
GCATTGACGGGTCGACGTATCTTACTATGGAGGACATCACCATTGACAAC
ACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGATTTGACATTGG
CGATAGCACGTACATTACCATCACGGGCGCCAATGTATACAACCAAGATG
ACTGTGTGGCGGTGAACTCGGGCGAGATGGTGACTTCTAGCTCGGTGATC
GGCCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCC
GCTGGTGACCCCCGCCCCGAAGCTCGAGGATCTGGAGAAGCGCGCAACCT
CCTGCACTTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAG
ACCTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCAC
CACGTTGGATCTGACCGATCTGAACGACGGGACTCACGAGTCCGCATCAA
GACCATCTACGGCGACACTGGGTCGGTCAGTGAGGTCACCTACAAGGAGA
TCACCCTGTCCGATATCACCGACTATGGCATTGTGGTGGAGCAGAACTAT
GACGATACGAGCGAGTCGCCGACCGATGGAATCACCATCGAAGACTTTGT
CCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACA
TCGTCTGCGGATCAGACAGCTGCACGGACTGGACTTGGACGGATGTGGAT
GTGACTGGAGGGAAGACCAGCTCCGACTGTGAGAATGTGCCGGACGATAT
CAGCTGTTAGAACATTTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACG
GGCTGTCGATCGGTTCCGTTGGCGGTCGGAGTGACAACACCGTGAAGAAC
GTTACCTTCTACGATTCGGAGATCAAGAGCTCTCAGAACGGTCATCTTCG
AAGGCGAAACCACCTTCGGTTACGAGGAATGGAGCGGACCTCTTGTCTCA
GTCTCCGGAACTGACATCACCGTCACCGGGGCCGACGGCGCCTATCTCAA
CGGTGACGGCAGTCGTTGGTGGGATGGCGAGGGCAGCAATGGCGGCAAGA
CGAAGCCCAAGTTCTTCTACGCCCATGATCTGACCTCGTCCACGATCAGC
GGTATCTACATCCAGAACTCGCCGGTGCAGGTGTTCAGCATTGACGGGTC
GACGTATCTTACTATGGAGGACATCACCATTGACAACACGGATGGCGATG
ATGGCGAGGCGGCCAACACCGATGGATTTGACATTGGCGATAGCACGTAC
ATTACCATCACGGGCGCCAATGTATACAACCAAGATGACTGTGTGGCGGT
GAACTCGGGCGAGATGGTGACTTCTAGCTCGGTGATCGGCCTAACGCTCT
GGGCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCC
GCCCCGAAGCTCGAGGATCTGGAGAAGCGCGCAACCTCCTGCACTTTCTC
CGGCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCA
CCATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTG
ACCGATCTGAACGACGGGACTCACGAGTCCGCATCAAGACCATCTACGGC
GACACTGGGTCGGTCAGTGAGGTCACCTACAAGGAGATCACCCTGTCCGA
TATCACCGACTATGGCATTGTGGTGGAGCAGAACTATGACGATACGAGCG
AGTCGCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTG
CAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATC
AGACAGCTGCACGGACTGGACTTGGACGGATGTGGATGTGACTGGAGGGA
AGACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAGAAC
ATTTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGG
TTCCGTTGGCGGTCGGAGTGACAACACCGTGAAGAACGTTACCTTCTACG
ATTCGGAGATCAAGAGCTCTCAGAACGGTCATCTTCGAAGGCGAAACCAC
CTTCGGTTACGAGGAATGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTG
ACATCACCGTCACCGGGGCCGACGGCGCCTATCTCAACGGTGACGGCAGT
CGTTGGTGGGATGGCGAGGGCAGCAATGGCGGCAAGACGAAGCCCAAGTT
CTTCTACGCCCATGATCTGACCTCGTCCACGATCAGCGGTATCTACATCC
AGAACTCGCCGGTGCAGGTGTTCAGCATTGACGGGTCGACGTATCTTACT
ATGGAGGACATCACCATTGACAACACGGATGGCGATGATGGCGAGGCGGC
CAACACCGATGGATTTGACATTGGCGATAGCACGTACATTACCATCACGG
GCGCCAATGTATACAACCAAGATGACTGTGTGGCGGTGAACTCGGGCGAG
ATGGTGACTTCTAGCTCGGTGATCGGCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCGAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACTTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGAGTCCGCATCAAGACCATCTACGGCGACACTGGGTCGG
TCAGTGAGGTCACCTACAAGGAGATCACCCTGTCCGATATCACCGACTAT
GGCATTGTGGTGGAGCAGAACTATGACGATACGAGCGAGTCGCCGACCGA
TGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTGTGG
AGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCAGACAGCTGCACG
GACTGGACTTGGACGGATGTGGATGTGACTGGAGGGAAGACCAGCTCCGA
CTGTGAGAATGTGCCGGACGATATCAGCTGTTAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTTGGCGGT
CGGAGTGACAACACCGTGAAGAACGTTACCTTCTACGATTCGGAGATCAA
GAGCTCTCAGAACGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAG
GAATGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCAC
CGGGGCCGACGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATG
GCGAGGGCAGCAATGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCAT
GATCTGACCTCGTCCACGATCAGCGGTATCTACATCCAGAACTCGCCGGT
GCAGGTGTTCAGCATTGACGGGTCGACGTATCTTACTATGGAGGACATCA
CCATTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGA
TTTGACATTGGCGATAGCACGTACATTACCATCACGGGCGCCAATGTATA
CAACCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGATGGTGACTTCTA
GCTCGGTGATCGGCCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCC
GTTGCCGATCCGCTGGTGACCCCCGCCCCGAAGCTCGAGGATCTGGAGAA
GCGCGCAACCTCCTGCACTTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCA
GCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTG
CCCTCAGGCACCACGTTGGATCTGACCGATCTGAACGACGGGACTCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011149-T1.utr3p1 | KJC3_011149-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011149-T1.utr5p1 | KJC3_011149-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR006626 |
| DBxref | PFAM:PF00295 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5357948..5359838 - |
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