|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5373988..5376625+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011155-T1 ID=KJC3_011155-T1|Name=KJC3_011155-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2638bp|location=Sequence derived from alignment at ch7:5373988..5376625+ (Aspergillus niger KJC3) GGTACCTGAAGCCTGCCTAGTTTGATCACCCTGAAACCAGCACTGCCTGT
CTTGACCTTGGTGGTGAGTTTGCACGTGGGCTGGCTGTTCAAATAAACTC
TCCAATTGACCCTCTCCCCGTGGAGAACACAGCAAACACTATAGGCTTTC
CATTGAGGGCATGACGAGGACCCTATGGTTTGTGCACTTGGCGAGGGCTG
ACCGGAGCACGAATCGGGAAGGGCAGAACTCAGAATTCGGTGTTCTCGGC
ATGCCGAAAGTCGGTATCCCTTGGCGCCACGATGATTTGCGTCCAGGATT
CGTATAGTTCCTCGTCCACGAGGCTGCCTACCGTCAGCGTGAGGCAGTGA
GCTAATATGGGGCCAATAAGCCACTACGAGGATGACATGGCCTCTACAGA
ACGAGAGACGCAGAGGATCAGGACGCCAATCCTGCGCTCCACCTGTCTAA
GGATTCGCTTTTGGACTATCCAGGGATTATGGCTTCGGATTATTGTATTC
GGGATACCGACGGCTGAGCACACGGAGGATGAGGTTCAGCTCACGGCCCC
TATCAGTATGCATTATGAGGATGGCTTCTTGGAAAGCAGAGGAATTGGAT
TATCGAACAAGTTGGTTCTGGACCATTGACTCGAGCGTATAAGTAACCTC
GTTCGGTCCTCCTGTCACCTTCTGATCAGCAACCAGCCTTTCCTCTCTCA
TTCCCTCATCTGCCCATCATGCAGACTCTCCTTGTGAGCTCGCTTGTGGT
CTCCCTCGCTGCGGCCCTGCCACACTACATCAGGAGCAATGGCATTGAAG
CCAGCCTCCTGACTGATCCCAAGGATGTCTCCGGCCGCACGGTCGACTAC
ATCATCGCTGGTGGAGGTCTGACTGGACTCACCACCGCTGCTCGTCTGAC
GGAGAACCCCAACATCAGTGTGCTCGTCATCGAAAGTGGCTCCTACGAGT
CGGACAGAGGTCCTATCATTGAGGACCTGAACGCCTACGGCGACATCTTT
GGCAGCAGTGTAGACCACGCCTACGAGACCGTGGAGCTCGCTACCAACAA
TCAAACCGCGCTGATCCGCTCCGGAAATGGTCTCGGTGGCTCTACTCTAG
TGAATGGTGGCACCTGGACTCGCCCCCACAAGGCACAGGTTGACTCTTGG
GAGACTGTCTTTGGAAATGAGGGCTGGAACTGGGACAATGTGGCCGCCTA
CTCCCTCCAGGCTGAGCGTGCTCGCGCACCAAATGCCAAACAGATCGCTG
CTGGCCACTACTTCAACGCATCCTGCCATGGTGTTAATGGTACTGTCCAT
GCCGGACCCCGCGACACCGGCGATGACTATTCTCCCATCGTCAAGGCTCT
CATGAGCGCTGTCGAAGACCGGGGCGTTCCCACCAAGAAAGACTTCGGAT
GCGGTGACCCCCATGGTGTGTCCATGTTCCCCAACACCTTGCACGAAGAC
CAAGTGCGCTCCGATGCCGCTCGCGAATGGCTACTTCCCAACTACCAACG
TCCCAACCTGCAAGTCCTGACCGGACAGTATGTTGGTAAGGTGCTCCTTA
GCCAGAACGGCACCACCCCTCGTGCCGTTGGCGTGGAATTCGGCACCCAC
AAGGGCAACACCCACAACGTTTACGCTAAGCACGAGGTCCTCCTGGCCGC
GGGCTCCGCTGTCTCTCCCACAATCCTCGAATATTCCGGTATCGGAATGA
AGTCCATCCTGGAGCCCCTTGGTATCGACACCGTCGTTGACCTGCCCGTC
GGCTTGAACCTGCAGGACCAGACCACCGCTACCGTCCGCTCCCGCATCAC
CTCTGCTGGTGCAGGACAGGGACAGGCCGCTTGGTTCGCCACCTTCAACG
AGACCTTTGGTGACTATTCCGAAAAGGCACACGAGCTGCTCAACACCAAG
CTGGAGCAGTGGGCCGAAGAGGCCGTCGCCCGTGGCGGATTCCACAACAC
CACCGCCTTGCTCATCCAGTACGAGAACTACCGCGACTGGATTGTCAACC
ACAACGTCGCGTACTCGGAACTCTTCCTCGACACTGCCGGAGTAGCCAGC
TTCGATGTGTGGGACCTTCTGCCCTTCACCCGAGGATACGTTCACATCCT
CGACAAGGACCCCTACCTTCACCACTTCGCCTACGACCCTCAGTACTTCC
TCAACGAGCTGGACCTGCTCGGTCAGGCTGCCGCTACTCAACTGGCCCGC
AACATCTCCAACTCCGGTGCCATGCAGACCTACTTCGCTGGGGAGACTAT
CCCCGGTGATAACCTCGCGTATGATGCCGATTTGAGCGCCTGGACTGAGT
ACATCCCGTACCACTTCCGTCCTAACTACCATGGCGTGGGTACTTGCTCC
ATGATGCCGAAGGAGATGGGCGGTGTTGTTGATAATGCTGCCCGTGTGTA
TGGTGTGCAGGGACTGCGTGTCATTGATGGTTCTATTCCTCCTACGCAAA
TGTCGTCCCATGTCATGACGGTGTTCTATGCCATGGCGCTAAAAATTTCG
GATGCTATCTTGGAAGATTATGCTTCCATGCAGTGAGTGGTATGATGGGG
ATATGAGTGAGGATATTAGGGGATGGTACTTAGATGCTGGGGAGGTATAA
TCATAGATTGGATAGAATTGGTAGGTTACATAGACAGG back to topCoding sequence (CDS) from alignment at ch7:5373988..5376625+ >KJC3_011155-T1 ID=KJC3_011155-T1|Name=KJC3_011155-T1|organism=Aspergillus niger KJC3|type=CDS|length=1818bp|location=Sequence derived from alignment at ch7:5373988..5376625+ (Aspergillus niger KJC3) ATGCAGACTCTCCTTGTGAGCTCGCTTGTGGTCTCCCTCGCTGCGGCCCT GCCACACTACATCAGGAGCAATGGCATTGAAGCCAGCCTCCTGACTGATC CCAAGGATGTCTCCGGCCGCACGGTCGACTACATCATCGCTGGTGGAGGT CTGACTGGACTCACCACCGCTGCTCGTCTGACGGAGAACCCCAACATCAG TGTGCTCGTCATCGAAAGTGGCTCCTACGAGTCGGACAGAGGTCCTATCA TTGAGGACCTGAACGCCTACGGCGACATCTTTGGCAGCAGTGTAGACCAC GCCTACGAGACCGTGGAGCTCGCTACCAACAATCAAACCGCGCTGATCCG CTCCGGAAATGGTCTCGGTGGCTCTACTCTAGTGAATGGTGGCACCTGGA CTCGCCCCCACAAGGCACAGGTTGACTCTTGGGAGACTGTCTTTGGAAAT GAGGGCTGGAACTGGGACAATGTGGCCGCCTACTCCCTCCAGGCTGAGCG TGCTCGCGCACCAAATGCCAAACAGATCGCTGCTGGCCACTACTTCAACG CATCCTGCCATGGTGTTAATGGTACTGTCCATGCCGGACCCCGCGACACC GGCGATGACTATTCTCCCATCGTCAAGGCTCTCATGAGCGCTGTCGAAGA CCGGGGCGTTCCCACCAAGAAAGACTTCGGATGCGGTGACCCCCATGGTG TGTCCATGTTCCCCAACACCTTGCACGAAGACCAAGTGCGCTCCGATGCC GCTCGCGAATGGCTACTTCCCAACTACCAACGTCCCAACCTGCAAGTCCT GACCGGACAGTATGTTGGTAAGGTGCTCCTTAGCCAGAACGGCACCACCC CTCGTGCCGTTGGCGTGGAATTCGGCACCCACAAGGGCAACACCCACAAC GTTTACGCTAAGCACGAGGTCCTCCTGGCCGCGGGCTCCGCTGTCTCTCC CACAATCCTCGAATATTCCGGTATCGGAATGAAGTCCATCCTGGAGCCCC TTGGTATCGACACCGTCGTTGACCTGCCCGTCGGCTTGAACCTGCAGGAC CAGACCACCGCTACCGTCCGCTCCCGCATCACCTCTGCTGGTGCAGGACA GGGACAGGCCGCTTGGTTCGCCACCTTCAACGAGACCTTTGGTGACTATT CCGAAAAGGCACACGAGCTGCTCAACACCAAGCTGGAGCAGTGGGCCGAA GAGGCCGTCGCCCGTGGCGGATTCCACAACACCACCGCCTTGCTCATCCA GTACGAGAACTACCGCGACTGGATTGTCAACCACAACGTCGCGTACTCGG AACTCTTCCTCGACACTGCCGGAGTAGCCAGCTTCGATGTGTGGGACCTT CTGCCCTTCACCCGAGGATACGTTCACATCCTCGACAAGGACCCCTACCT TCACCACTTCGCCTACGACCCTCAGTACTTCCTCAACGAGCTGGACCTGC TCGGTCAGGCTGCCGCTACTCAACTGGCCCGCAACATCTCCAACTCCGGT GCCATGCAGACCTACTTCGCTGGGGAGACTATCCCCGGTGATAACCTCGC GTATGATGCCGATTTGAGCGCCTGGACTGAGTACATCCCGTACCACTTCC GTCCTAACTACCATGGCGTGGGTACTTGCTCCATGATGCCGAAGGAGATG GGCGGTGTTGTTGATAATGCTGCCCGTGTGTATGGTGTGCAGGGACTGCG TGTCATTGATGGTTCTATTCCTCCTACGCAAATGTCGTCCCATGTCATGA CGGTGTTCTATGCCATGGCGCTAAAAATTTCGGATGCTATCTTGGAAGAT TATGCTTCCATGCAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
Term | Definition |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011155-T1.utr3p1 | KJC3_011155-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
Note | SECRETED:SignalP(1-16) |
Note | CAZy:AA3_3 |
Note | CAZy:AA3 |
Note | CAZy:AA3_2 |
DBxref | InterPro:IPR036188 |
DBxref | InterPro:IPR027424 |
DBxref | InterPro:IPR007867 |
DBxref | InterPro:IPR012132 |
DBxref | InterPro:IPR000172 |
DBxref | PFAM:PF00732 |
DBxref | PFAM:PF05199 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:5373988..5376625 + |
|