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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5383785..5385447+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011157-T1 ID=KJC3_011157-T1|Name=KJC3_011157-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1663bp|location=Sequence derived from alignment at ch7:5383785..5385447+ (Aspergillus niger KJC3) CCCTCTTTTGCTGGTTATAAATCAAGCATGAACACTTCTCTCGTTCGACC
CTCAATCTCTCCTCCAAAAACTTATACTGATTGTTACCATGACCGGTTCC
AACCAACTTACAGCCCTGGAGGCCTTTCTCCTTTCGCATCCCAGCATCGG
CTACATCCCGCCCACCTCCGCCGAGTATGTGCCCACAGCCAACCGGGTGT
TCATCGCCGGCATCAACGCCCGTCCACTGGCCATCGTGCAGCCCCAGTCT
CCCGCAGATGTCGCAGCACTCGTTAAATTCGCCAAGACCCACTCTGTACC
CTTTACCGTTCGCTCGGGCGGCCACAATCTCGAGGCTCGCTCCGTCGTGA
ATGGCGCCCTTCTCATCGACCTGCGCGCCCTGACGGCCGTTACGGTCGCC
CCGGATCGTCAGTCCGCTACCGTCCAGGGAGGTATTCTCCAGGGTGAACT
GGCTAATATCCTCTGGGAGGAAGGGCTGGTTACTCCGACCGGTTCTATCC
CCAGCGTCGGATATGTTGGCTGGGCCATGTATGGCGGCTATGGGCCCTTT
TCGTCTCATTGGGGACTGGGTGTTGATCAGATTCTGGGTGCTACGGTGGT
GGATGCTGATGGGGAGGTTGTTGTTGCTGATGAGTCCCTCCTAAGGGGTA
TCCGTGGTGCAGGGGGAATCTTCGGCATCATTGTTGACGTTACTATCAAG
GTCTACTCCCTTCCAAAGGTACGTCCACTTCCCCAATGATAGTAACAGCA
AGTGTATTAAGCGTACAGCTCCTCGCCGGCGCAATCATTTTCGACTCCTC
CGACATCACTCAAACTATCATTACTTTCAACGCCGCCTATGAGAATCTCC
TCAACACAGAGGGCCTCCCTCCTCCACTGACCCTGCAACAAGTCGCCTTC
AACAGTCCTCAGGGTCGCGTATTCGCTGTGCTCTTTACATGGAGCCACCC
CGACCTAGAGGAGGGCCAACGATGGGCGGAGAGGATTTCCTCCCTCGCCC
CGTTGCTCATGAGCACCGTCGGCCCCACGACCGTCCCGGACTGGTTCACA
GGTAATGGTGCCCTGGTACCCGAAGCTGTGTATGGGTCCCTCCAAACTCA
TAACGTCCGGCGCATCAATCCCGCCGTGGCGGAGGTGATTGCACGGAATG
TGGCATCCATGCCGTCTGATCCGGGCACGATGGCCACAATCCATCAGTTG
CGGGGACAGTCTGCCGGTGAAGACGCAGACAAGCTCGAGCATTCTGTCTT
TGCGACGAGGGAGCCGCATTATATGCTTGAGTTTGTGGGATGTGCTACAG
ATAAGCAAAAGGCGGCGGCATCTGAAGAGTGGGCAGTTAAACTGGCAGAG
GAGATTGTGCAGGCCGATGAGGGGAATGTCTTGCCCACGGCGTATGTGTC
TTTGATGAGATTCGCGAGCCTGAAGCCGGAAGAGGCAGTCAAGAAGGCGT
TTGGGGCCAATGCAGAGGCGGTGCGCACGTTGAAGCAGAGGTTTGATCCG
GAGAATGTGTTTGCGTTGGCGCTGCCGGCGTTGAAGTAGTACATGGTGGT
GTTTTTCTTTTAGAAATGGTGATAGTATGCACCGATGTTAATCAACTCGT
TTCCCTTACCGGCTTACACTGCTAGAGCTGGAGGAGAGATAATATGTCTC
ACTACCTCCTTCC back to topCoding sequence (CDS) from alignment at ch7:5383785..5385447+ >KJC3_011157-T1 ID=KJC3_011157-T1|Name=KJC3_011157-T1|organism=Aspergillus niger KJC3|type=CDS|length=2802bp|location=Sequence derived from alignment at ch7:5383785..5385447+ (Aspergillus niger KJC3) ATGACCGGTTCCAACCAACTTACAGCCCTGGAGGCCTTTCTCCTTTCGCA TCCCAGCATCGGCTACATCCCGCCCACCTCCGCCGAGTATGTGCCCACAG CCAACCGGGTGTTCATCGCCGGCATCAACGCCCGTCCACTGGCCATCGTG CAGCCCCAGTCTCCCGCAGATGTCGCAGCACTCGTTAAATTCGCCAAGAC CCACTCTGTACCCTTTACCGTTCGCTCGGGCGGCCACAATCTCGAGGCTC GCTCCGTCGTGAATGGCGCCCTTCTCATCGACCTGCGCGCCCTGACGGCC GTTACGGTCGCCCCGGATCGTCAGTCCGCTACCGTCCAGGGAGGTATTCT CCAGGGTGAACTGGCTAATATCCTCTGGGAGGAAGGGCTGGTTACTCCGA CCGGTTCTATCCCCAGCGTCGGATATGTTGGCTGGGCCATGTATGGCGGC TATGGGCCCTTTTCGTCTCATTGGGGACTGGGTGTTGATCAGATTCTGGG TGCTACGGTGGTGGATGCTGATGGGGAGGTTGTTGTTGCTGATGAGTCCC TCCTAAGGGGTATCCGTGGTGCAGGGGGAATCTTCGGCATCATTGTTGAC GTTACTATCAAGGTCTACTCCCTTCCAAAGCTCCTCGCCGGCGCAATCAT TTTCGACTCCTCCGACATCACTCAAACTATCATTACTTTCAACGCCGCCT ATGAGAATCTCCTCAACACAGAGGGCCTCCCTCCTCCACTGACCCTGCAA CAAGTCGCCTTCAACAGTCCTCAGGGTCGCGTATTCGCTGTGCTCTTTAC ATGGAGCCACCCCGACCTAGAGGAGGGCCAACGATGGGCGGAGAGGATTT CCTCCCTCGCCCCGTTGCTCATGAGCACCGTCGGCCCCACGACCGTCCCG GACTGGTTCACAGGTAATGGTGCCCTGGTACCCGAAGCTGTGTATGGGTC CCTCCAAACTCATAACGTCCGGCGCATCAATCCCGCCGTGGCGGAGGTGA TTGCACGGAATGTGGCATCCATGCCGTCTGATCCGGGCACGATGGCCACA ATCCATCAGTTGCGGGGACAGTCTGCCGGTGAAGACGCAGACAAGCTCGA GCATTCTGTCTTTGCGACGAGGGAGCCGCATTATATGCTTGAGTTTGTGG GATGTGCTACAGATAAGCAAAAGGCGGCGGCATCTGAAGAGTGGGCAGTT AAACTGGCAGAGGAGATTGTGCAGGCCGATGAGGGGAATGTCTTGCCCAC GGCGTATGTGTCTTTGATGAGATTCGCGAGCCTGAAGCCGGAAGAGGCAG TCAAGAAGGCGTTTGGGGCCAATGCAGAGGCGGTGCGCACGTTGAAGCAG AGGTTTGATCCGGAGAATGTGTTTGCGTTGGCGCTGCCGGCGTTGAAGTA GATGACCGGTTCCAACCAACTTACAGCCCTGGAGGCCTTTCTCCTTTCGC ATCCCAGCATCGGCTACATCCCGCCCACCTCCGCCGAGTATGTGCCCACA GCCAACCGGGTGTTCATCGCCGGCATCAACGCCCGTCCACTGGCCATCGT GCAGCCCCAGTCTCCCGCAGATGTCGCAGCACTCGTTAAATTCGCCAAGA CCCACTCTGTACCCTTTACCGTTCGCTCGGGCGGCCACAATCTCGAGGCT CGCTCCGTCGTGAATGGCGCCCTTCTCATCGACCTGCGCGCCCTGACGGC CGTTACGGTCGCCCCGGATCGTCAGTCCGCTACCGTCCAGGGAGGTATTC TCCAGGGTGAACTGGCTAATATCCTCTGGGAGGAAGGGCTGGTTACTCCG ACCGGTTCTATCCCCAGCGTCGGATATGTTGGCTGGGCCATGTATGGCGG CTATGGGCCCTTTTCGTCTCATTGGGGACTGGGTGTTGATCAGATTCTGG GTGCTACGGTGGTGGATGCTGATGGGGAGGTTGTTGTTGCTGATGAGTCC CTCCTAAGGGGTATCCGTGGTGCAGGGGGAATCTTCGGCATCATTGTTGA CGTTACTATCAAGGTCTACTCCCTTCCAAAGCTCCTCGCCGGCGCAATCA TTTTCGACTCCTCCGACATCACTCAAACTATCATTACTTTCAACGCCGCC TATGAGAATCTCCTCAACACAGAGGGCCTCCCTCCTCCACTGACCCTGCA ACAAGTCGCCTTCAACAGTCCTCAGGGTCGCGTATTCGCTGTGCTCTTTA CATGGAGCCACCCCGACCTAGAGGAGGGCCAACGATGGGCGGAGAGGATT TCCTCCCTCGCCCCGTTGCTCATGAGCACCGTCGGCCCCACGACCGTCCC GGACTGGTTCACAGGTAATGGTGCCCTGGTACCCGAAGCTGTGTATGGGT CCCTCCAAACTCATAACGTCCGGCGCATCAATCCCGCCGTGGCGGAGGTG ATTGCACGGAATGTGGCATCCATGCCGTCTGATCCGGGCACGATGGCCAC AATCCATCAGTTGCGGGGACAGTCTGCCGGTGAAGACGCAGACAAGCTCG AGCATTCTGTCTTTGCGACGAGGGAGCCGCATTATATGCTTGAGTTTGTG GGATGTGCTACAGATAAGCAAAAGGCGGCGGCATCTGAAGAGTGGGCAGT TAAACTGGCAGAGGAGATTGTGCAGGCCGATGAGGGGAATGTCTTGCCCA CGGCGTATGTGTCTTTGATGAGATTCGCGAGCCTGAAGCCGGAAGAGGCA GTCAAGAAGGCGTTTGGGGCCAATGCAGAGGCGGTGCGCACGTTGAAGCA GAGGTTTGATCCGGAGAATGTGTTTGCGTTGGCGCTGCCGGCGTTGAAGT AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
Term | Definition |
GO:0071949 | FAD binding |
GO:0016491 | oxidoreductase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011157-T1.utr5p1 | KJC3_011157-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011157-T1.utr3p1 | KJC3_011157-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_7.13 |
Note | SMCOG1138:FAD linked oxidase domain protein |
Note | CAZy:AA7 |
DBxref | InterPro:IPR036318 |
DBxref | InterPro:IPR016166 |
DBxref | InterPro:IPR016169 |
DBxref | InterPro:IPR006094 |
DBxref | InterPro:IPR016167 |
DBxref | InterPro:IPR012951 |
DBxref | PFAM:PF01565 |
DBxref | PFAM:PF08031 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:5383785..5385447 + |
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