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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5400964..5402035+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011164-T1 ID=KJC3_011164-T1|Name=KJC3_011164-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1072bp|location=Sequence derived from alignment at ch7:5400964..5402035+ (Aspergillus niger KJC3)
TCACCAGCGATCCCGTTTTTGACAACTGTGCCATATATAAACAATTTAAA
AGGGCCTGTCAATTTCACATTGACAGCAACTCATCCCTCAATTATTAGTT
TTCTTTGAAACAACCTATCCTTTCCCAATGGCAACCCTTGTCTTCATCCC
CGGGGCTTGGATCACCCGCGAGCTGTACCAACCCTTCCTCGATGCCTGCT
CTGTTGCTGGCTACCCCGTTCACTATGCAGATTATCCATCCATTGATCCG
GCGGATCCTACTGTAGCCGACTGCAAGACCGATACGGACATTATCAGGAA
TACACTGCATAGATTGGTCGAAGAGGAGGGCAATGACATTTTCCTGATGA
TGCACTCATATGCCGGAATGCCTGGTGCAGCTGCCGCCCTTGGGTTGGCC
AAGTCGCAGCGAACCCAACAGGGCAAGCGTGGTGGCGTAATTGGGATGAT
CTTCATCGCAGCCTTCTTGGTACCAGAGGGTGTAAGCTGTGCAGGATTGC
AGGGCGGGAATCTTCCTGCGTGGATTCTGCTGAATCAGGTGAGTTTTCCT
AGAAATAAGCCTCTCGGGGAAGACACATGACTAACGTTAACACAGCCCAC
TGCCAACCTTAACGTTCCGGCCGACCCCGTCGCCAACTTTGCGGCAGATG
TTGATCCGGCGCTGCTCAAGGACCTCAATGAGAAGGTCAAACCTCATGCG
ACGCTGGCGTTTACCTCTCCCCAGCCGGCTCCTGCATGGGCGGAGGAAGC
CTTCCAAGGACGGTTGGCCTTTATTGTCACCACGGGCGATCCTGCAGTTC
CGAAAGAGGCACAGTATGGCATGATGGCTGCGACTCAGCAGCAGTGGATT
ATCAAGGAGATTGATTCAAGTCACTGTGCTCCGTTCATTGATCGGATTGA
TGAGACGGTTCGGTTGGTAGAGGAATGTGTGAAGGAGTTCCAGCCTTGAA
GTGCATGCCAGGATGTTATTCTGTCACTCTAGTAACTGTCTAGCGATAAT
CCGTGTAGAGGCATACATATAATAGAAAAACATTCAACAACAAGGAATAG
AACCAACCAATACGCCAACTTA back to topCoding sequence (CDS) from alignment at ch7:5400964..5402035+ >KJC3_011164-T1 ID=KJC3_011164-T1|Name=KJC3_011164-T1|organism=Aspergillus niger KJC3|type=CDS|length=1530bp|location=Sequence derived from alignment at ch7:5400964..5402035+ (Aspergillus niger KJC3)
ATGGCAACCCTTGTCTTCATCCCCGGGGCTTGGATCACCCGCGAGCTGTA
CCAACCCTTCCTCGATGCCTGCTCTGTTGCTGGCTACCCCGTTCACTATG
CAGATTATCCATCCATTGATCCGGCGGATCCTACTGTAGCCGACTGCAAG
ACCGATACGGACATTATCAGGAATACACTGCATAGATTGGTCGAAGAGGA
GGGCAATGACATTTTCCTGATGATGCACTCATATGCCGGAATGCCTGGTG
CAGCTGCCGCCCTTGGGTTGGCCAAGTCGCAGCGAACCCAACAGGGCAAG
CGTGGTGGCGTAATTGGGATGATCTTCATCGCAGCCTTCTTGGTACCAGA
GGGTGTAAGCTGTGCAGGATTGCAGGGCGGGAATCTTCCTGCGTGGATTC
TGCTGAATCAGCCCACTGCCAACCTTAACGTTCCGGCCGACCCCGTCGCC
AACTTTGCGGCAGATGTTGATCCGGCGCTGCTCAAGGACCTCAATGAGAA
GGTCAAACCTCATGCGACGCTGGCGTTTACCTCTCCCCAGCCGGCTCCTG
CATGGGCGGAGGAAGCCTTCCAAGGACGGTTGGCCTTTATTGTCACCACG
GGCGATCCTGCAGTTCCGAAAGAGGCACAGTATGGCATGATGGCTGCGAC
TCAGCAGCAGTGGATTATCAAGGAGATTGATTCAAGTCACTGTGCTCCGT
TCATTGATCGGATTGATGAGACGGTTCGGTTGGTAGAGGAATGTGTGAAG
GAGTTCCAGCCTTGAATGGCAACCCTTGTCTTCATCCCCGGGGCTTGGAT
CACCCGCGAGCTGTACCAACCCTTCCTCGATGCCTGCTCTGTTGCTGGCT
ACCCCGTTCACTATGCAGATTATCCATCCATTGATCCGGCGGATCCTACT
GTAGCCGACTGCAAGACCGATACGGACATTATCAGGAATACACTGCATAG
ATTGGTCGAAGAGGAGGGCAATGACATTTTCCTGATGATGCACTCATATG
CCGGAATGCCTGGTGCAGCTGCCGCCCTTGGGTTGGCCAAGTCGCAGCGA
ACCCAACAGGGCAAGCGTGGTGGCGTAATTGGGATGATCTTCATCGCAGC
CTTCTTGGTACCAGAGGGTGTAAGCTGTGCAGGATTGCAGGGCGGGAATC
TTCCTGCGTGGATTCTGCTGAATCAGCCCACTGCCAACCTTAACGTTCCG
GCCGACCCCGTCGCCAACTTTGCGGCAGATGTTGATCCGGCGCTGCTCAA
GGACCTCAATGAGAAGGTCAAACCTCATGCGACGCTGGCGTTTACCTCTC
CCCAGCCGGCTCCTGCATGGGCGGAGGAAGCCTTCCAAGGACGGTTGGCC
TTTATTGTCACCACGGGCGATCCTGCAGTTCCGAAAGAGGCACAGTATGG
CATGATGGCTGCGACTCAGCAGCAGTGGATTATCAAGGAGATTGATTCAA
GTCACTGTGCTCCGTTCATTGATCGGATTGATGAGACGGTTCGGTTGGTA
GAGGAATGTGTGAAGGAGTTCCAGCCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011164-T1.utr5p1 | KJC3_011164-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011164-T1.utr3p1 | KJC3_011164-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.13 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5400964..5402035 + |
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