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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5423916..5425474+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011176-T1 ID=KJC3_011176-T1|Name=KJC3_011176-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1559bp|location=Sequence derived from alignment at ch7:5423916..5425474+ (Aspergillus niger KJC3)
GTCCCGACCGGGTTTAGTTATTTTTCTTTCTTCGATGGCATCTTTCACAC
TCTGGTCGGATCTGTTGAAGATGATGCGCATAGACCGTAGATACTACAGA
TAACACTCCAGCTGCTTCAACGGCACACACACACCGGTCGAGTTCAACCA
TTTCCCCAATCCTGAGATGAAAAATTCTCTTCCTGTCCATTCCATCGCAC
CCGCGCACCGCATTGGGAATAGTTCCCCCATCTTCATCATCGTCCATCCA
CATCCACCAGATGTCGCAGACCACAGCAGGACCCCCTATAAGACTCTTGC
TTACCCACAAGAAATAATGATGACCAAGTTATTTCTCGATCTTGCGTCGC
CCGTGTGCTATCATCCACCATGACCGTACCTCCCAACCCATCTCTGAGCG
ACTCCGCTACCGGTTATGTAGTGACCCATCGCGGCAGCGTCGTGGAAAAC
CGACACCAAGTGCACGCCGCCGTCACCGATGCCACGGGCCGCATCTTATA
TGCCGTGGGCGATCCCACGCGCGTCACCCTGGCCCGCTCGGCCGCGAAAC
CTGCCCAAGCCCTGGCGGTGGTGGAAACCGGCGCTCTCGAAAAGTTTGAC
TTCAACGAGGCGGATCTAGCGTTGATGTGCGCCTCCCACAGCAGTGAAGA
TCGCCATCTTGCCCGTGCTCGCGCCATGTTGAGCAAGGCCAATATGCAGG
AAGAGGACTTACGGTGTGGGGGTCATGCGGCCCTGTCGGAGGCTGTCAAT
CGAGCCTGGATCAAGCAAGACTGGATACCGACGGCCATCGCCAACAACTG
CTCGGGCAAACATGCCGGTATGCTGGCAGGTGCCAAAGCCCTGGGTGCCA
CTACTGCAGAGTACCACTGCCCCACCCACCCCCTTCAGCAGCAGGTTGCC
CACGCCGTCGAGGAGTTGGCGGGCTTACCTTCAGATCGTGTCCAATGGGC
CATCGACGGCTGTAACCTGCCGGCCCCCGCGCTGCCCCTTCAGCATCTGG
CCGCTATCTACGCCCGCATTGCCAATGCGGCTGATGCGGTCCCCTCGGAT
CATCTGTCTCCTCGAACGCAGGCCCTAGGTCGCATCTTTCGAGCGATGGC
GGGCCATCCGGAACTGGTGGGAGGAGATGGTCGGTTCTGTACCGCGCTGA
TGCAGGCATTTGAGGGAGCTCTGATCGGCAAGGTGGGAGCGGACGGCTGT
TACGCCATTGGGGTGCGTGCTTCAGATTACACGCAGCGGCTGGGTAGCAG
CGGGGCTCTGGGGATTGCGGTTAAGATTGAGGATGGCAATCGGGAGATAC
TCTATGCCGCTGTGGTTGAGATCCTGCGCCGACTCCAGATCGGCTCTCCC
GTGCAGCTGCAGTCGTTGGCCGCATTTCATAAACCCGAGATCCGAAACAC
GGCCGGCGTGGTGACAGGGCACACCTCGCACCAATTTCAAATGGGCAAGG
TATAGTGGGGGGAACTTGCATCTGAGAGCATCATACTAGTTACTACTACT
ACTACTACTTGCCGATGAATAAACATCCTGCTTGTACTACGCATCGCCGT
CTTGCTGAC back to topCoding sequence (CDS) from alignment at ch7:5423916..5425474+ >KJC3_011176-T1 ID=KJC3_011176-T1|Name=KJC3_011176-T1|organism=Aspergillus niger KJC3|type=CDS|length=1086bp|location=Sequence derived from alignment at ch7:5423916..5425474+ (Aspergillus niger KJC3)
ATGACCGTACCTCCCAACCCATCTCTGAGCGACTCCGCTACCGGTTATGT
AGTGACCCATCGCGGCAGCGTCGTGGAAAACCGACACCAAGTGCACGCCG
CCGTCACCGATGCCACGGGCCGCATCTTATATGCCGTGGGCGATCCCACG
CGCGTCACCCTGGCCCGCTCGGCCGCGAAACCTGCCCAAGCCCTGGCGGT
GGTGGAAACCGGCGCTCTCGAAAAGTTTGACTTCAACGAGGCGGATCTAG
CGTTGATGTGCGCCTCCCACAGCAGTGAAGATCGCCATCTTGCCCGTGCT
CGCGCCATGTTGAGCAAGGCCAATATGCAGGAAGAGGACTTACGGTGTGG
GGGTCATGCGGCCCTGTCGGAGGCTGTCAATCGAGCCTGGATCAAGCAAG
ACTGGATACCGACGGCCATCGCCAACAACTGCTCGGGCAAACATGCCGGT
ATGCTGGCAGGTGCCAAAGCCCTGGGTGCCACTACTGCAGAGTACCACTG
CCCCACCCACCCCCTTCAGCAGCAGGTTGCCCACGCCGTCGAGGAGTTGG
CGGGCTTACCTTCAGATCGTGTCCAATGGGCCATCGACGGCTGTAACCTG
CCGGCCCCCGCGCTGCCCCTTCAGCATCTGGCCGCTATCTACGCCCGCAT
TGCCAATGCGGCTGATGCGGTCCCCTCGGATCATCTGTCTCCTCGAACGC
AGGCCCTAGGTCGCATCTTTCGAGCGATGGCGGGCCATCCGGAACTGGTG
GGAGGAGATGGTCGGTTCTGTACCGCGCTGATGCAGGCATTTGAGGGAGC
TCTGATCGGCAAGGTGGGAGCGGACGGCTGTTACGCCATTGGGGTGCGTG
CTTCAGATTACACGCAGCGGCTGGGTAGCAGCGGGGCTCTGGGGATTGCG
GTTAAGATTGAGGATGGCAATCGGGAGATACTCTATGCCGCTGTGGTTGA
GATCCTGCGCCGACTCCAGATCGGCTCTCCCGTGCAGCTGCAGTCGTTGG
CCGCATTTCATAAACCCGAGATCCGAAACACGGCCGGCGTGGTGACAGGG
CACACCTCGCACCAATTTCAAATGGGCAAGGTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011176-T1.utr5p1 | KJC3_011176-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011176-T1.utr3p1 | KJC3_011176-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.13 |
| DBxref | InterPro:IPR010349 |
| DBxref | PFAM:PF06089 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5423916..5425474 + |
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