You are here

Home

KJC3_011183-T1, KJC3_011183-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011183-T1
Unique NameKJC3_011183-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:5438336..5439929+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011183-T1 ID=KJC3_011183-T1|Name=KJC3_011183-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1594bp|location=Sequence derived from alignment at ch7:5438336..5439929+ (Aspergillus niger KJC3)
AATATCGGTCGCTACATGGTACATGCATTTTCTTCCTCGCCCTCAACGCA
ACGGATAACCATACCAGTTGGATTAAGCGCCGTGATGGACGATCGTCTCT
CCTCCCAACTTGAACGCTATGCCAGCCAGGTGACTGCGAGCGCCACCCTC
ATCATTCGTCACCTTAAGTCACTCAAAGACGAACCATCGACGCTGCCCAG
CCAGACCAGCGTACCCACGGCAGTCGGCACGGCACAACTACGGCTGGCGG
AAGCCGCATTTCAGCTGCTGCATTTTACTCGGGATCCAGGTAACGTCCTG
ACCCAGTTAACGGTCGATGTTCGCATATCCCATGGCTTCCCAGGGCCTCC
CACTCTGCCCTTACATCATTTGGTGCACATGAAAAGCTGATGATAACGTT
TGTGTGTATTTTCATACGGCAGCTCCAAGTGATCAGTGCTGTACGATGGT
TGCTCCACTTCGAGATTTTCTCCTTGGTGCCGCTGGAGGGCAGCATTTCG
TATCACGAGCTCTCCAGCGTGGCCAACGTGCCCGAGAATCTCCTGCGTAG
TCACATTCGACTCGCTATGACCTGTCACTTGTTTCAGGAGTCCGGGCCGA
TAGGGATGGTTGCTCATAGCCCCGTATCGTGCCAACTAGCCAGTGACCCA
AGCTTAGTCTCTTGGGGTCAGTACTTTGCGAATTCCGTCTTTCCGACTGC
GACGAAGAACGTGAATGCTACTGCGGCTTGGCCAGGTAGCAAGGCGCTCA
ATGAAACGGCGCATAACCTCGCCTTCAACCACCATGGCTCCTTCTTCGAC
TACGTCTCGCAGGATCCTGCCCGCACAGTGGAGTTTGCCAATTCCATGAA
AGCAGTATCCACCACCAGCTTGTTTGACACCTGCCATTTGTGTAAGAGCT
TTGACTGGTCGTCACTCGGCGACGGGGTTGTAGTTGATGTAAGTCCATAT
ACTCTATATTCCTCTTGTTCACATTATCTTACCACGACTTCTAGATGGGC
GGCTCTACGGGCCATGTCAGTATTGCTCTCGCAGAGAGCTTTCCGAGCCT
GCGCTTTGTGGTGCAAGATCTCCCGGACGTAGTTTCCAACAGCATCAGGC
AATTGGAAGAGCGCCAGCTGCCCCTGTCGGTAACCACCCGTATCCAGTTC
CAGGGTCATTCGCTGCTCCACATGCAGCCAGTTAAGGGTGCCGCCGTCTA
TCTCCTGCGCCAAATCCTCCATGATTGGCCGGACCGCGAAGCTGTTCAGA
TTCTTCGCAGCATCGTGCCCGCTCTGGGACCAAGGAGCAAAATATTCATC
GCAGACATTGTTCTACCGGAAGCGGGCTCCATTCCAGCTACCGAGGAACA
AGTGATGCGGTGCAATGACCTGTTGCTTCACCAATTTACCAACACGCTGG
AGCGAACGCTCGAGGATTGGCAGGCCATTGTGAGTCGGGTGAGTGATAAT
CTACGAATCCAACACGTCTATAGAGATCCGGGCAGCATCCTGTCCTTGTT
GGTCATAGAGACTGTTTAGACCGTCTCAATCTTGTAATTTAATTAGAACA
ATTCTTCTGGTCCATTTAAACATGACACGGGGTGGTATTGGGAC
back to top

Coding sequence (CDS) from alignment at ch7:5438336..5439929+

>KJC3_011183-T1 ID=KJC3_011183-T1|Name=KJC3_011183-T1|organism=Aspergillus niger KJC3|type=CDS|length=4032bp|location=Sequence derived from alignment at ch7:5438336..5439929+ (Aspergillus niger KJC3)
ATGGTACATGCATTTTCTTCCTCGCCCTCAACGCAACGGATAACCATACC
AGTTGGATTAAGCGCCGTGATGGACGATCGTCTCTCCTCCCAACTTGAAC
GCTATGCCAGCCAGGTGACTGCGAGCGCCACCCTCATCATTCGTCACCTT
AAGTCACTCAAAGACGAACCATCGACGCTGCCCAGCCAGACCAGCGTACC
CACGGCAGTCGGCACGGCACAACTACGGCTGGCGGAAGCCGCATTTCAGC
TGCTGCATTTTACTCGGGATCCAGGTAACGTCCTGACCCAGTTAACGGTC
GATCTCCAAGTGATCAGTGCTGTACGATGGTTGCTCCACTTCGAGATTTT
CTCCTTGGTGCCGCTGGAGGGCAGCATTTCGTATCACGAGCTCTCCAGCG
TGGCCAACGTGCCCGAGAATCTCCTGCGTAGTCACATTCGACTCGCTATG
ACCTGTCACTTGTTTCAGGAGTCCGGGCCGATAGGGATGGTTGCTCATAG
CCCCGTATCGTGCCAACTAGCCAGTGACCCAAGCTTAGTCTCTTGGGGTC
AGTACTTTGCGAATTCCGTCTTTCCGACTGCGACGAAGAACGTGAATGCT
ACTGCGGCTTGGCCAGGTAGCAAGGCGCTCAATGAAACGGCGCATAACCT
CGCCTTCAACCACCATGGCTCCTTCTTCGACTACGTCTCGCAGGATCCTG
CCCGCACAGTGGAGTTTGCCAATTCCATGAAAGCAGTATCCACCACCAGC
TTGTTTGACACCTGCCATTTGTGTAAGAGCTTTGACTGGTCGTCACTCGG
CGACGGGGTTGTAGTTGATATGGGCGGCTCTACGGGCCATGTCAGTATTG
CTCTCGCAGAGAGCTTTCCGAGCCTGCGCTTTGTGGTGCAAGATCTCCCG
GACGTAGTTTCCAACAGCATCAGGCAATTGGAAGAGCGCCAGCTGCCCCT
GTCGGTAACCACCCGTATCCAGTTCCAGGGTCATTCGCTGCTCCACATGC
AGCCAGTTAAGGGTGCCGCCGTCTATCTCCTGCGCCAAATCCTCCATGAT
TGGCCGGACCGCGAAGCTGTTCAGATTCTTCGCAGCATCGTGCCCGCTCT
GGGACCAAGGAGCAAAATATTCATCGCAGACATTGTTCTACCGGAAGCGG
GCTCCATTCCAGCTACCGAGGAACAAGTGATGCGGTGCAATGACCTGTTG
CTTCACCAATTTACCAACACGCTGGAGCGAACGCTCGAGGATTGGCAGGC
CATTGTGAGTCGGGTGAGTGATAATCTACGAATCCAACACGTCTATAGAG
ATCCGGGCAGCATCCTGTCCTTGTTGGTCATAGAGACTGTTTAGATGGTA
CATGCATTTTCTTCCTCGCCCTCAACGCAACGGATAACCATACCAGTTGG
ATTAAGCGCCGTGATGGACGATCGTCTCTCCTCCCAACTTGAACGCTATG
CCAGCCAGGTGACTGCGAGCGCCACCCTCATCATTCGTCACCTTAAGTCA
CTCAAAGACGAACCATCGACGCTGCCCAGCCAGACCAGCGTACCCACGGC
AGTCGGCACGGCACAACTACGGCTGGCGGAAGCCGCATTTCAGCTGCTGC
ATTTTACTCGGGATCCAGGTAACGTCCTGACCCAGTTAACGGTCGATCTC
CAAGTGATCAGTGCTGTACGATGGTTGCTCCACTTCGAGATTTTCTCCTT
GGTGCCGCTGGAGGGCAGCATTTCGTATCACGAGCTCTCCAGCGTGGCCA
ACGTGCCCGAGAATCTCCTGCGTAGTCACATTCGACTCGCTATGACCTGT
CACTTGTTTCAGGAGTCCGGGCCGATAGGGATGGTTGCTCATAGCCCCGT
ATCGTGCCAACTAGCCAGTGACCCAAGCTTAGTCTCTTGGGGTCAGTACT
TTGCGAATTCCGTCTTTCCGACTGCGACGAAGAACGTGAATGCTACTGCG
GCTTGGCCAGGTAGCAAGGCGCTCAATGAAACGGCGCATAACCTCGCCTT
CAACCACCATGGCTCCTTCTTCGACTACGTCTCGCAGGATCCTGCCCGCA
CAGTGGAGTTTGCCAATTCCATGAAAGCAGTATCCACCACCAGCTTGTTT
GACACCTGCCATTTGTGTAAGAGCTTTGACTGGTCGTCACTCGGCGACGG
GGTTGTAGTTGATATGGGCGGCTCTACGGGCCATGTCAGTATTGCTCTCG
CAGAGAGCTTTCCGAGCCTGCGCTTTGTGGTGCAAGATCTCCCGGACGTA
GTTTCCAACAGCATCAGGCAATTGGAAGAGCGCCAGCTGCCCCTGTCGGT
AACCACCCGTATCCAGTTCCAGGGTCATTCGCTGCTCCACATGCAGCCAG
TTAAGGGTGCCGCCGTCTATCTCCTGCGCCAAATCCTCCATGATTGGCCG
GACCGCGAAGCTGTTCAGATTCTTCGCAGCATCGTGCCCGCTCTGGGACC
AAGGAGCAAAATATTCATCGCAGACATTGTTCTACCGGAAGCGGGCTCCA
TTCCAGCTACCGAGGAACAAGTGATGCGGTGCAATGACCTGTTGCTTCAC
CAATTTACCAACACGCTGGAGCGAACGCTCGAGGATTGGCAGGCCATTGT
GAGTCGGGTGAGTGATAATCTACGAATCCAACACGTCTATAGAGATCCGG
GCAGCATCCTGTCCTTGTTGGTCATAGAGACTGTTTAGATGGTACATGCA
TTTTCTTCCTCGCCCTCAACGCAACGGATAACCATACCAGTTGGATTAAG
CGCCGTGATGGACGATCGTCTCTCCTCCCAACTTGAACGCTATGCCAGCC
AGGTGACTGCGAGCGCCACCCTCATCATTCGTCACCTTAAGTCACTCAAA
GACGAACCATCGACGCTGCCCAGCCAGACCAGCGTACCCACGGCAGTCGG
CACGGCACAACTACGGCTGGCGGAAGCCGCATTTCAGCTGCTGCATTTTA
CTCGGGATCCAGGTAACGTCCTGACCCAGTTAACGGTCGATCTCCAAGTG
ATCAGTGCTGTACGATGGTTGCTCCACTTCGAGATTTTCTCCTTGGTGCC
GCTGGAGGGCAGCATTTCGTATCACGAGCTCTCCAGCGTGGCCAACGTGC
CCGAGAATCTCCTGCGTAGTCACATTCGACTCGCTATGACCTGTCACTTG
TTTCAGGAGTCCGGGCCGATAGGGATGGTTGCTCATAGCCCCGTATCGTG
CCAACTAGCCAGTGACCCAAGCTTAGTCTCTTGGGGTCAGTACTTTGCGA
ATTCCGTCTTTCCGACTGCGACGAAGAACGTGAATGCTACTGCGGCTTGG
CCAGGTAGCAAGGCGCTCAATGAAACGGCGCATAACCTCGCCTTCAACCA
CCATGGCTCCTTCTTCGACTACGTCTCGCAGGATCCTGCCCGCACAGTGG
AGTTTGCCAATTCCATGAAAGCAGTATCCACCACCAGCTTGTTTGACACC
TGCCATTTGTGTAAGAGCTTTGACTGGTCGTCACTCGGCGACGGGGTTGT
AGTTGATATGGGCGGCTCTACGGGCCATGTCAGTATTGCTCTCGCAGAGA
GCTTTCCGAGCCTGCGCTTTGTGGTGCAAGATCTCCCGGACGTAGTTTCC
AACAGCATCAGGCAATTGGAAGAGCGCCAGCTGCCCCTGTCGGTAACCAC
CCGTATCCAGTTCCAGGGTCATTCGCTGCTCCACATGCAGCCAGTTAAGG
GTGCCGCCGTCTATCTCCTGCGCCAAATCCTCCATGATTGGCCGGACCGC
GAAGCTGTTCAGATTCTTCGCAGCATCGTGCCCGCTCTGGGACCAAGGAG
CAAAATATTCATCGCAGACATTGTTCTACCGGAAGCGGGCTCCATTCCAG
CTACCGAGGAACAAGTGATGCGGTGCAATGACCTGTTGCTTCACCAATTT
ACCAACACGCTGGAGCGAACGCTCGAGGATTGGCAGGCCATTGTGAGTCG
GGTGAGTGATAATCTACGAATCCAACACGTCTATAGAGATCCGGGCAGCA
TCCTGTCCTTGTTGGTCATAGAGACTGTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008171O-methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011183KJC3_011183Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011183-T1KJC3_011183-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011183-T1.utr5p1KJC3_011183-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011183-T1.exon1KJC3_011183-T1.exon1Aspergillus niger KJC3exon
KJC3_011183-T1.exon2KJC3_011183-T1.exon2Aspergillus niger KJC3exon
KJC3_011183-T1.exon3KJC3_011183-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011183-T1.cdsKJC3_011183-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011183-T1.utr3p1KJC3_011183-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR016461
DBxrefInterPro:IPR001077
DBxrefPFAM:PF00891
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:5438336..5439929 +
Powered by Drupal