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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5444958..5446305+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011185-T1 ID=KJC3_011185-T1|Name=KJC3_011185-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1348bp|location=Sequence derived from alignment at ch7:5444958..5446305+ (Aspergillus niger KJC3)
CTTGTCAATACGCTCTTTCAGGTGACTGTTCAACTATCCCAAGTTCGCCC
TCCCTCCTACAACGACTAGTTTGTTATCCATCATTTTGCCCATGTCCGCA
CCAACTGACGCCACTCCGGCATCCAATGTTCTTGGCACCATCGGCACCGT
ATTCTGGTGTATCCAGCTTGTCCCCCAGATATGGTATAACTGGCGACGGA
AAAAGACAGAAGGATTACCTCCTGCAATGGGGTTCTTGTGGGCTGTTTGT
ATGGACTAACTACCTCCCTCCCCCCTCCCCGGTGATGGTGATATATATAT
AGCACAAGTGTACTTGTAGTATCCGCGATTGGTACCGTGCCAAAGACAGG
AGTGCCACAGTTAGTAATATTGAACGAAATCCTATCAGGTGCTGTGCCCA
TGGGTGTGTATTTGATCCTACAGGTAAACGTCATCCTTCACTTTGCCCGT
CAGGTTCTGGTCATGACTCGGAAAGTCGAGGTGCTTACTATCATGAATGC
CAGGAAGTCAATCTCCCTATGCAAATCCAGCCGCAGATATTCGGGACATT
TTCGGCCATCATTTGGGCTCAGATTTTACATTATGATCAGTTAGACCTAC
TCTTTTTGTTCCCAGTCCTGGAAATATCTTTGCTCAAGATGTATCGATGT
CGATATACTAACAAGCGTGACAGCAATTATACCACTCGGAAGGCCACATT
GGCGTGTGTTGGGTTATTGGCAGTTATGGGTGGGCTCGAAGCCCTACTCA
TCTTAACTTTGAGGGCATGATGACCGTTCTACCCGTTCATTACAATCTTG
CGTACTAACTCGGCCCTGGTCGCAGATACCATACAATAAAGGCATCACCT
GGCCGGATATCTTGGTTGGTGCGATAGCAACAGTGCTTCTCGCCGGCGGA
ATGTTACCCATTTATTTTGAATTGGGGAAAAGACAAGGCCGAGTAATTGG
AATCAGTACGTGTTGTTCCTGTTTCTCGTGGGCGAGAGAGCGAATTCTCA
TCGACATAGATTGGGTCTTCTTGTGCATCGACACGCTGGGAGGACTGTTC
TCAATCTTTGCGCTTGGTATGGCCGTTACATCCCTCCCCGTACGACATGC
TAACGGACTCCAACAGTGGCACAAGGGTCGTTTGATATCCTTGGCGGGGT
TATGTATATTGTTGTGTGAGTCCAATCCTTGCCTCGCCGTACATGCTGAG
TGTCTAACCCATAAATAGCGTGGTACTCGAGCTGGGAATCTACCTCAGCC
ACATCATATGGCGCATCCGATTCCGGGAGGCCCGGAAAGAAGCCAAACAT
TCGGGTAGAAGTGTCGAGGATATTCTCCAAATGTCTAATCCCGCGTGA back to topCoding sequence (CDS) from alignment at ch7:5444958..5446305+ >KJC3_011185-T1 ID=KJC3_011185-T1|Name=KJC3_011185-T1|organism=Aspergillus niger KJC3|type=CDS|length=5880bp|location=Sequence derived from alignment at ch7:5444958..5446305+ (Aspergillus niger KJC3)
ATGTCCGCACCAACTGACGCCACTCCGGCATCCAATGTTCTTGGCACCAT
CGGCACCGTATTCTGGTGTATCCAGCTTGTCCCCCAGATATGGTATAACT
GGCGACGGAAAAAGACAGAAGGATTACCTCCTGCAATGGGGTTCTTGTGG
GCTGTTTGTGCTGTGCCCATGGGTGTGTATTTGATCCTACAGGAAGTCAA
TCTCCCTATGCAAATCCAGCCGCAGATATTCGGGACATTTTCGGCCATCA
TTTGGGCTCAGATTTTACATTATGATCACAATTATACCACTCGGAAGGCC
ACATTGGCGTGTGTTGGGTTATTGGCAGTTATGGGTGGGCTCGAAGCCCT
ACTCATCTTAACTTTGAGGATACCATACAATAAAGGCATCACCTGGCCGG
ATATCTTGGTTGGTGCGATAGCAACAGTGCTTCTCGCCGGCGGAATGTTA
CCCATTTATTTTGAATTGGGGAAAAGACAAGGCCGAGTAATTGGAATCAA
TTGGGTCTTCTTGTGCATCGACACGCTGGGAGGACTGTTCTCAATCTTTG
CGCTTGTGGCACAAGGGTCGTTTGATATCCTTGGCGGGGTTATGTATATT
GTTGTCGTGGTACTCGAGCTGGGAATCTACCTCAGCCACATCATATGGCG
CATCCGATTCCGGGAGGCCCGGAAAGAAGCCAAACATTCGGGTAGAAGTG
TCGAGGATATTCTCCAAATGTCTAATCCCGCGTGAATGTCCGCACCAACT
GACGCCACTCCGGCATCCAATGTTCTTGGCACCATCGGCACCGTATTCTG
GTGTATCCAGCTTGTCCCCCAGATATGGTATAACTGGCGACGGAAAAAGA
CAGAAGGATTACCTCCTGCAATGGGGTTCTTGTGGGCTGTTTGTGCTGTG
CCCATGGGTGTGTATTTGATCCTACAGGAAGTCAATCTCCCTATGCAAAT
CCAGCCGCAGATATTCGGGACATTTTCGGCCATCATTTGGGCTCAGATTT
TACATTATGATCACAATTATACCACTCGGAAGGCCACATTGGCGTGTGTT
GGGTTATTGGCAGTTATGGGTGGGCTCGAAGCCCTACTCATCTTAACTTT
GAGGATACCATACAATAAAGGCATCACCTGGCCGGATATCTTGGTTGGTG
CGATAGCAACAGTGCTTCTCGCCGGCGGAATGTTACCCATTTATTTTGAA
TTGGGGAAAAGACAAGGCCGAGTAATTGGAATCAATTGGGTCTTCTTGTG
CATCGACACGCTGGGAGGACTGTTCTCAATCTTTGCGCTTGTGGCACAAG
GGTCGTTTGATATCCTTGGCGGGGTTATGTATATTGTTGTCGTGGTACTC
GAGCTGGGAATCTACCTCAGCCACATCATATGGCGCATCCGATTCCGGGA
GGCCCGGAAAGAAGCCAAACATTCGGGTAGAAGTGTCGAGGATATTCTCC
AAATGTCTAATCCCGCGTGAATGTCCGCACCAACTGACGCCACTCCGGCA
TCCAATGTTCTTGGCACCATCGGCACCGTATTCTGGTGTATCCAGCTTGT
CCCCCAGATATGGTATAACTGGCGACGGAAAAAGACAGAAGGATTACCTC
CTGCAATGGGGTTCTTGTGGGCTGTTTGTGCTGTGCCCATGGGTGTGTAT
TTGATCCTACAGGAAGTCAATCTCCCTATGCAAATCCAGCCGCAGATATT
CGGGACATTTTCGGCCATCATTTGGGCTCAGATTTTACATTATGATCACA
ATTATACCACTCGGAAGGCCACATTGGCGTGTGTTGGGTTATTGGCAGTT
ATGGGTGGGCTCGAAGCCCTACTCATCTTAACTTTGAGGATACCATACAA
TAAAGGCATCACCTGGCCGGATATCTTGGTTGGTGCGATAGCAACAGTGC
TTCTCGCCGGCGGAATGTTACCCATTTATTTTGAATTGGGGAAAAGACAA
GGCCGAGTAATTGGAATCAATTGGGTCTTCTTGTGCATCGACACGCTGGG
AGGACTGTTCTCAATCTTTGCGCTTGTGGCACAAGGGTCGTTTGATATCC
TTGGCGGGGTTATGTATATTGTTGTCGTGGTACTCGAGCTGGGAATCTAC
CTCAGCCACATCATATGGCGCATCCGATTCCGGGAGGCCCGGAAAGAAGC
CAAACATTCGGGTAGAAGTGTCGAGGATATTCTCCAAATGTCTAATCCCG
CGTGAATGTCCGCACCAACTGACGCCACTCCGGCATCCAATGTTCTTGGC
ACCATCGGCACCGTATTCTGGTGTATCCAGCTTGTCCCCCAGATATGGTA
TAACTGGCGACGGAAAAAGACAGAAGGATTACCTCCTGCAATGGGGTTCT
TGTGGGCTGTTTGTGCTGTGCCCATGGGTGTGTATTTGATCCTACAGGAA
GTCAATCTCCCTATGCAAATCCAGCCGCAGATATTCGGGACATTTTCGGC
CATCATTTGGGCTCAGATTTTACATTATGATCACAATTATACCACTCGGA
AGGCCACATTGGCGTGTGTTGGGTTATTGGCAGTTATGGGTGGGCTCGAA
GCCCTACTCATCTTAACTTTGAGGATACCATACAATAAAGGCATCACCTG
GCCGGATATCTTGGTTGGTGCGATAGCAACAGTGCTTCTCGCCGGCGGAA
TGTTACCCATTTATTTTGAATTGGGGAAAAGACAAGGCCGAGTAATTGGA
ATCAATTGGGTCTTCTTGTGCATCGACACGCTGGGAGGACTGTTCTCAAT
CTTTGCGCTTGTGGCACAAGGGTCGTTTGATATCCTTGGCGGGGTTATGT
ATATTGTTGTCGTGGTACTCGAGCTGGGAATCTACCTCAGCCACATCATA
TGGCGCATCCGATTCCGGGAGGCCCGGAAAGAAGCCAAACATTCGGGTAG
AAGTGTCGAGGATATTCTCCAAATGTCTAATCCCGCGTGAATGTCCGCAC
CAACTGACGCCACTCCGGCATCCAATGTTCTTGGCACCATCGGCACCGTA
TTCTGGTGTATCCAGCTTGTCCCCCAGATATGGTATAACTGGCGACGGAA
AAAGACAGAAGGATTACCTCCTGCAATGGGGTTCTTGTGGGCTGTTTGTG
CTGTGCCCATGGGTGTGTATTTGATCCTACAGGAAGTCAATCTCCCTATG
CAAATCCAGCCGCAGATATTCGGGACATTTTCGGCCATCATTTGGGCTCA
GATTTTACATTATGATCACAATTATACCACTCGGAAGGCCACATTGGCGT
GTGTTGGGTTATTGGCAGTTATGGGTGGGCTCGAAGCCCTACTCATCTTA
ACTTTGAGGATACCATACAATAAAGGCATCACCTGGCCGGATATCTTGGT
TGGTGCGATAGCAACAGTGCTTCTCGCCGGCGGAATGTTACCCATTTATT
TTGAATTGGGGAAAAGACAAGGCCGAGTAATTGGAATCAATTGGGTCTTC
TTGTGCATCGACACGCTGGGAGGACTGTTCTCAATCTTTGCGCTTGTGGC
ACAAGGGTCGTTTGATATCCTTGGCGGGGTTATGTATATTGTTGTCGTGG
TACTCGAGCTGGGAATCTACCTCAGCCACATCATATGGCGCATCCGATTC
CGGGAGGCCCGGAAAGAAGCCAAACATTCGGGTAGAAGTGTCGAGGATAT
TCTCCAAATGTCTAATCCCGCGTGAATGTCCGCACCAACTGACGCCACTC
CGGCATCCAATGTTCTTGGCACCATCGGCACCGTATTCTGGTGTATCCAG
CTTGTCCCCCAGATATGGTATAACTGGCGACGGAAAAAGACAGAAGGATT
ACCTCCTGCAATGGGGTTCTTGTGGGCTGTTTGTGCTGTGCCCATGGGTG
TGTATTTGATCCTACAGGAAGTCAATCTCCCTATGCAAATCCAGCCGCAG
ATATTCGGGACATTTTCGGCCATCATTTGGGCTCAGATTTTACATTATGA
TCACAATTATACCACTCGGAAGGCCACATTGGCGTGTGTTGGGTTATTGG
CAGTTATGGGTGGGCTCGAAGCCCTACTCATCTTAACTTTGAGGATACCA
TACAATAAAGGCATCACCTGGCCGGATATCTTGGTTGGTGCGATAGCAAC
AGTGCTTCTCGCCGGCGGAATGTTACCCATTTATTTTGAATTGGGGAAAA
GACAAGGCCGAGTAATTGGAATCAATTGGGTCTTCTTGTGCATCGACACG
CTGGGAGGACTGTTCTCAATCTTTGCGCTTGTGGCACAAGGGTCGTTTGA
TATCCTTGGCGGGGTTATGTATATTGTTGTCGTGGTACTCGAGCTGGGAA
TCTACCTCAGCCACATCATATGGCGCATCCGATTCCGGGAGGCCCGGAAA
GAAGCCAAACATTCGGGTAGAAGTGTCGAGGATATTCTCCAAATGTCTAA
TCCCGCGTGAATGTCCGCACCAACTGACGCCACTCCGGCATCCAATGTTC
TTGGCACCATCGGCACCGTATTCTGGTGTATCCAGCTTGTCCCCCAGATA
TGGTATAACTGGCGACGGAAAAAGACAGAAGGATTACCTCCTGCAATGGG
GTTCTTGTGGGCTGTTTGTGCTGTGCCCATGGGTGTGTATTTGATCCTAC
AGGAAGTCAATCTCCCTATGCAAATCCAGCCGCAGATATTCGGGACATTT
TCGGCCATCATTTGGGCTCAGATTTTACATTATGATCACAATTATACCAC
TCGGAAGGCCACATTGGCGTGTGTTGGGTTATTGGCAGTTATGGGTGGGC
TCGAAGCCCTACTCATCTTAACTTTGAGGATACCATACAATAAAGGCATC
ACCTGGCCGGATATCTTGGTTGGTGCGATAGCAACAGTGCTTCTCGCCGG
CGGAATGTTACCCATTTATTTTGAATTGGGGAAAAGACAAGGCCGAGTAA
TTGGAATCAATTGGGTCTTCTTGTGCATCGACACGCTGGGAGGACTGTTC
TCAATCTTTGCGCTTGTGGCACAAGGGTCGTTTGATATCCTTGGCGGGGT
TATGTATATTGTTGTCGTGGTACTCGAGCTGGGAATCTACCTCAGCCACA
TCATATGGCGCATCCGATTCCGGGAGGCCCGGAAAGAAGCCAAACATTCG
GGTAGAAGTGTCGAGGATATTCTCCAAATGTCTAATCCCGCGTGAATGTC
CGCACCAACTGACGCCACTCCGGCATCCAATGTTCTTGGCACCATCGGCA
CCGTATTCTGGTGTATCCAGCTTGTCCCCCAGATATGGTATAACTGGCGA
CGGAAAAAGACAGAAGGATTACCTCCTGCAATGGGGTTCTTGTGGGCTGT
TTGTGCTGTGCCCATGGGTGTGTATTTGATCCTACAGGAAGTCAATCTCC
CTATGCAAATCCAGCCGCAGATATTCGGGACATTTTCGGCCATCATTTGG
GCTCAGATTTTACATTATGATCACAATTATACCACTCGGAAGGCCACATT
GGCGTGTGTTGGGTTATTGGCAGTTATGGGTGGGCTCGAAGCCCTACTCA
TCTTAACTTTGAGGATACCATACAATAAAGGCATCACCTGGCCGGATATC
TTGGTTGGTGCGATAGCAACAGTGCTTCTCGCCGGCGGAATGTTACCCAT
TTATTTTGAATTGGGGAAAAGACAAGGCCGAGTAATTGGAATCAATTGGG
TCTTCTTGTGCATCGACACGCTGGGAGGACTGTTCTCAATCTTTGCGCTT
GTGGCACAAGGGTCGTTTGATATCCTTGGCGGGGTTATGTATATTGTTGT
CGTGGTACTCGAGCTGGGAATCTACCTCAGCCACATCATATGGCGCATCC
GATTCCGGGAGGCCCGGAAAGAAGCCAAACATTCGGGTAGAAGTGTCGAG
GATATTCTCCAAATGTCTAATCCCGCGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011185-T1.utr5p1 | KJC3_011185-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006603 |
| DBxref | PFAM:PF04193 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5444958..5446305 + |
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