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KJC3_011186-T1, KJC3_011186-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011186-T1
Unique NameKJC3_011186-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:5445296..5447800-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011186-T1 ID=KJC3_011186-T1|Name=KJC3_011186-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2505bp|location=Sequence derived from alignment at ch7:5445296..5447800- (Aspergillus niger KJC3)
AAGGCTTTCATCAACTACAACATCATCGGCGCCTCCTCCAATGTCCGCGC
CTCGACGTGCGAGCATCTCTGCAGATAGAGGTATGTATATATAAATCCCC
CATATGGCTTGATCTTCCTCCCTTCATTCTTGGCCAATCCTACAGGTTAT
TAATTAGAAAGAAGACTGTCCCAAGTGCCGAACCCGTCGCATCAAATGCG
ACAGGTCGGTCCCAGCATGCCGGAAATGCACCACACGAGGTTTCTCATGT
CCAGGATACGGCCTTATTCTCCGATGGAACCAAGGAGTTGCCAGCAGAGG
TAGACTGGCAGGCCGGCAGCTACCTATACCATCCACTCCGACTATTGACC
ACTACCCGGATGCGGTGACATCCGAACTCATGCATCACTACCATCGGATC
GTCTCTGCCAAGCTGGCCTGGGTGGATGGTCCGACGAACCCCTGGAGACA
GGTTATCGTCCCACTGGCTGGGGCATCGTCGACGGTCCTCCATGCGGTGC
TCGCACTTTCGTCGGAAGACCTTGCGGTACGATTCCCGATCGGGCATCCG
CGTCGCCAGCAGCTGCAGCTCGTCTCAATGTGCCGCCGGAACCAGGCCTT
GTCGTCGGTTGCTCGTCTGCTGTGCCACATGAGGCAAGAGGGCTCCTCCA
CCAGCCAGGCACAATGTGCGCTGGCCGCCACGCTCATCCTATATAACGTC
GAGCTCCTCGGCGCCGCGTCGGCTAAGTGGCGAATGCACCTGGAGGCTGC
GCGTGTGATCCGTCAATGGAAAGATCATGCACTTACGGACGCCGGACGCG
AGGATGAGATCGATGCTTTTTTGATCTACGAGCAGTACTACGCAAGTGTC
TTTGCTGGCCTCACAACATTCGATGCCCTGGAGGAGTACGAAGCCGTTCC
ACTAACTGATGCAAATGCCATTTTTGGCGATTTCATCATCATTATCAGTC
GTGCGACACATGTGGAACGCTTGCAATATAGTCATGGCCATCCGATCGAT
TCTTCATTGCTTCGCACTATGACAGGGGACTTGGAAGCCGCCAAGGCCCG
CATGCTTCAGCTTAGTCTCATACTTCGCTGGCAAACAGACCAGGCGTGTA
GCAGTTTCCAGCACCTGGTGTGGATTTTTTATTACGCTAGCCTAATCTAT
GTCTACCACGTCCTCGCCCGGGATGGTTCTTTAGACACGACACGCCAGTC
CTGGAGAGATTCCATCTTTGCTCATCTAGCCCTTCTCGTTGACAAGCGCT
CATTCGCTCATGATCTTGTTTGGCCGCTATTCATTGCAGGCACCGAGTGC
CGCGGGTGTCCGCAGAAGCAGGAGGTGGTAGCGCACGAGATCGAACTGGT
GATGGAGATCAGCGGCACATTGGACCGACGCAACGTCTTGTCGTTTCTGC
AACGGTTCTGGTCTCTGCCGGACAGTGGCCTTACGTGGATCCAATACATG
AGACTGGCACCCGAACGGCGGATGCTTATCCTTTAATACCACCTATCACG
CGGGATTAGACATTTGGAGAATATCCTCGACACTTCTACCCGAATGTTTG
GCTTCTTTCCGGGCCTCCCGGAATCGGATGCGCCATATGATGTGGCTGAG
GTAGATTCCCAGCTCGAGTACCACGCTATTTATGGGTTAGACACTCAGCA
TGTACGGCGAGGCAAGGATTGGACTCACACAACAATATACATAACCCCGC
CAAGGATATCAAACGACCCTTGTGCCACTGTTGGAGTCCGTTAGCATGTC
GTACGGGGAGGGATGTAACGGCCATACCAAGCGCAAAGATTGAGAACAGT
CCTCCCAGCGTGTCGATGCACAAGAAGACCCAATCTATGTCGATGAGAAT
TCGCTCTCTCGCCCACGAGAAACAGGAACAACACGTACTGATTCCAATTA
CTCGGCCTTGTCTTTTCCCCAATTCAAAATAAATGGGTAACATTCCGCCG
GCGAGAAGCACTGTTGCTATCGCACCAACCAAGATATCCGGCCAGGTGAT
GCCTTTATTGTATGGTATCTGCGACCAGGGCCGAGTTAGTACGCAAGATT
GTAATGAACGGGTAGAACGGTCATCATGCCCTCAAAGTTAAGATGAGTAG
GGCTTCGAGCCCACCCATAACTGCCAATAACCCAACACACGCCAATGTGG
CCTTCCGAGTGGTATAATTGCTGTCACGCTTGTTAGTATATCGACATCGA
TACATCTTGAGCAAAGATATTTCCAGGACTGGGAACAAAAAGAGTAGGTC
TAACTGATCATAATGTAAAATCTGAGCCCAAATGATGGCCGAAAATGTCC
CGAATATCTGCGGCTGGATTTGCATAGGGAGATTGACTTCCTGGCATTCA
TGATAGTAAGCACCTCGACTTTCCGAGTCATGACCAGAACCTGACGGGCA
AAGTGAAGGATGACGTTTACCTGTAGGATCAAATACACACCCATGGGCAC
AGCACCTGATAGGATTTCGTTCAATATTACTAACTGTGGCACTCCTGTCT
TTGGC
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Coding sequence (CDS) from alignment at ch7:5445296..5447800-

>KJC3_011186-T1 ID=KJC3_011186-T1|Name=KJC3_011186-T1|organism=Aspergillus niger KJC3|type=CDS|length=2724bp|location=Sequence derived from alignment at ch7:5445296..5447800- (Aspergillus niger KJC3)
ACTGTCCCAAGTGCCGAACCCGTCGCATCAAATGCGACAGGTCGGTCCCA
GCATGCCGGAAATGCACCACACGAGGTTTCTCATGTCCAGGATACGGCCT
TATTCTCCGATGGAACCAAGGAGTTGCCAGCAGAGGTAGACTGGCAGGCC
GGCAGCTACCTATACCATCCACTCCGACTATTGACCACTACCCGGATGCG
GTGACATCCGAACTCATGCATCACTACCATCGGATCGTCTCTGCCAAGCT
GGCCTGGGTGGATGGTCCGACGAACCCCTGGAGACAGGTTATCGTCCCAC
TGGCTGGGGCATCGTCGACGGTCCTCCATGCGGTGCTCGCACTTTCGTCG
GAAGACCTTGCGGTACGATTCCCGATCGGGCATCCGCGTCGCCAGCAGCT
GCAGCTCGTCTCAATGTGCCGCCGGAACCAGGCCTTGTCGTCGGTTGCTC
GTCTGCTGTGCCACATGAGGCAAGAGGGCTCCTCCACCAGCCAGGCACAA
TGTGCGCTGGCCGCCACGCTCATCCTATATAACGTCGAGCTCCTCGGCGC
CGCGTCGGCTAAGTGGCGAATGCACCTGGAGGCTGCGCGTGTGATCCGTC
AATGGAAAGATCATGCACTTACGGACGCCGGACGCGAGGATGAGATCGAT
GCTTTTTTGATCTACGAGCAGTACTACGCAAGTGTCTTTGCTGGCCTCAC
AACATTCGATGCCCTGGAGGAGTACGAAGCCGTTCCACTAACTGATGCAA
ATGCCATTTTTGGCGATTTCATCATCATTATCAGTCGTGCGACACATGTG
GAACGCTTGCAATATAGTCATGGCCATCCGATCGATTCTTCATTGCTTCG
CACTATGACAGGGGACTTGGAAGCCGCCAAGGCCCGCATGCTTCAGCTTA
GTCTCATACTTCGCTGGCAAACAGACCAGGCGTGTAGCAGTTTCCAGCAC
CTGGTGTGGATTTTTTATTACGCTAGCCTAATCTATGTCTACCACGTCCT
CGCCCGGGATGGTTCTTTAGACACGACACGCCAGTCCTGGAGAGATTCCA
TCTTTGCTCATCTAGCCCTTCTCGTTGACAAGCGCTCATTCGCTCATGAT
CTTGTTTGGCCGCTATTCATTGCAGGCACCGAGTGCCGCGGGTGTCCGCA
GAAGCAGGAGGTGGTAGCGCACGAGATCGAACTGGTGATGGAGATCAGCG
GCACATTGGACCGACGCAACGTCTTGTCGTTTCTGCAACGGTTCTGGTCT
CTGCCGGACAGTGGCCTTACGTGGATCCAATACATGAGACTGGCACCCGA
ACGGCGGATGCTTATCCTTTAAATGTCCGCGCCTCGACGTGCGAGCATCT
CTGCAGATAGAGACTGTCCCAAGTGCCGAACCCGTCGCATCAAATGCGAC
AGGTCGGTCCCAGCATGCCGGAAATGCACCACACGAGGTTTCTCATGTCC
AGGATACGGCCTTATTCTCCGATGGAACCAAGGAGTTGCCAGCAGAGGTA
GACTGGCAGGCCGGCAGCTACCTATACCATCCACTCCGACTATTGACCAC
TACCCGGATGCGGTGACATCCGAACTCATGCATCACTACCATCGGATCGT
CTCTGCCAAGCTGGCCTGGGTGGATGGTCCGACGAACCCCTGGAGACAGG
TTATCGTCCCACTGGCTGGGGCATCGTCGACGGTCCTCCATGCGGTGCTC
GCACTTTCGTCGGAAGACCTTGCGGTACGATTCCCGATCGGGCATCCGCG
TCGCCAGCAGCTGCAGCTCGTCTCAATGTGCCGCCGGAACCAGGCCTTGT
CGTCGGTTGCTCGTCTGCTGTGCCACATGAGGCAAGAGGGCTCCTCCACC
AGCCAGGCACAATGTGCGCTGGCCGCCACGCTCATCCTATATAACGTCGA
GCTCCTCGGCGCCGCGTCGGCTAAGTGGCGAATGCACCTGGAGGCTGCGC
GTGTGATCCGTCAATGGAAAGATCATGCACTTACGGACGCCGGACGCGAG
GATGAGATCGATGCTTTTTTGATCTACGAGCAGTACTACGCAAGTGTCTT
TGCTGGCCTCACAACATTCGATGCCCTGGAGGAGTACGAAGCCGTTCCAC
TAACTGATGCAAATGCCATTTTTGGCGATTTCATCATCATTATCAGTCGT
GCGACACATGTGGAACGCTTGCAATATAGTCATGGCCATCCGATCGATTC
TTCATTGCTTCGCACTATGACAGGGGACTTGGAAGCCGCCAAGGCCCGCA
TGCTTCAGCTTAGTCTCATACTTCGCTGGCAAACAGACCAGGCGTGTAGC
AGTTTCCAGCACCTGGTGTGGATTTTTTATTACGCTAGCCTAATCTATGT
CTACCACGTCCTCGCCCGGGATGGTTCTTTAGACACGACACGCCAGTCCT
GGAGAGATTCCATCTTTGCTCATCTAGCCCTTCTCGTTGACAAGCGCTCA
TTCGCTCATGATCTTGTTTGGCCGCTATTCATTGCAGGCACCGAGTGCCG
CGGGTGTCCGCAGAAGCAGGAGGTGGTAGCGCACGAGATCGAACTGGTGA
TGGAGATCAGCGGCACATTGGACCGACGCAACGTCTTGTCGTTTCTGCAA
CGGTTCTGGTCTCTGCCGGACAGTGGCCTTACGTGGATCCAATACATGAG
ACTGGCACCCGAACGGCGGATGCTTATCCTTTAAATGTCCGCGCCTCGAC
GTGCGAGCATCTCTGCAGATAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011186KJC3_011186Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011186-T1KJC3_011186-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011186-T1.cdsKJC3_011186-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011186-T1.utr3p2KJC3_011186-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_011186-T1.utr3p1KJC3_011186-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011186-T1.exon3KJC3_011186-T1.exon3Aspergillus niger KJC3exon
KJC3_011186-T1.exon2KJC3_011186-T1.exon2Aspergillus niger KJC3exon
KJC3_011186-T1.exon1KJC3_011186-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011186-T1.utr5p1KJC3_011186-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:5445296..5447800 -
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