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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:32701..33836+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011207-T1 ID=KJC3_011207-T1|Name=KJC3_011207-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1136bp|location=Sequence derived from alignment at ch8:32701..33836+ (Aspergillus niger KJC3)
CTCGGCAAACCGCACAGAGAAATTCTCTTCTACCATGATCTTCCTGGGAA
ATACTTAATTGTGTTGTTATCTCTTTCATTTACTACTAAATTCGTGAGAA
ACTCCATCTGAGTAATACACTATGGTCTTGGTAGCTCTTATCACAGGGGG
AAGTAAGCAGTGTCCCGATATGCCCACGATAATGGCCGACCGAGAATAAC
TGTTCATAGCTAGTGGCATCGGCCTCGACGTCGCTCAACAACTCGACGTG
ACAGGCCTCTGGAAAATTCACATCATCGGTAGCAACTTGAAACGTGGCAA
GGAGGCCGCTGCCTCGCTTAAAAATACCACATTTCACCAGACTGATGTGA
CAAGTTACGAGCAGCAGGGCGCTACGTTTCATAAGATCTTCAATGAGGAA
AAGAGATTGGATTTTGTCTTTGCGAATGCCGGAGTCGCAGAAGACACGGT
ATTCTTTTCCCGGCATGATACTGGAATTCCGCCACGGCCTGATATAGCTG
GATTAACGGATATTAACTTGATCGGTGCGATTTATACGAGTTACCTCGCC
ATGCACTATTTTCGCCGATCGCCGGAGAAGACGGTGGGAAAAAGGAATTT
GGTTATTATGTCAAGCATTGGCGGATTATATCCATGCATGCATACCCCGG
TATACTCAGCGACAAAACGTAAGTATATGTTGCTTCTTTGATGGATCAAA
GCTTATAATGGTTAGATGCTCTGGTTGGATTTACGCGCTCAGTGGGTAAA
CAACTGTGGAACGAGGGTGTGAAAGTGAACGCGATTTGCCCAGGAGTGGT
CCTCACGCCACTGCTAACACCAGAGCTGAAGGCCTACTTTTCAGAGAATG
TCCTGCTCACCATGAGTGATGTGACCAATGTGATATTAAAGCTGATCTCG
GAGGAAGAAGTGACTGATTCAAAGGGGACATTTGTGCCAGGTGATCAGCT
TCATTCGCAAGCAATCCTAGTGTCGGGTGAGAAATATTACTGTGTTGATA
TGCCGGAATATTTTGATGAGGAGACACAATTAACCCATAAGCATATGATG
GGTTGAAGAGGCTGTAAATAGCCTTTCGTTGATAGAGCTGGCAGTCAAAG
AAGGGGCCCATACGTTCTTGCCTTTCGATGGAGGAG back to topCoding sequence (CDS) from alignment at ch8:32701..33836+ >KJC3_011207-T1 ID=KJC3_011207-T1|Name=KJC3_011207-T1|organism=Aspergillus niger KJC3|type=CDS|length=2493bp|location=Sequence derived from alignment at ch8:32701..33836+ (Aspergillus niger KJC3)
ATGGTCTTGGTAGCTCTTATCACAGGGGGAACTAGTGGCATCGGCCTCGA
CGTCGCTCAACAACTCGACGTGACAGGCCTCTGGAAAATTCACATCATCG
GTAGCAACTTGAAACGTGGCAAGGAGGCCGCTGCCTCGCTTAAAAATACC
ACATTTCACCAGACTGATGTGACAAGTTACGAGCAGCAGGGCGCTACGTT
TCATAAGATCTTCAATGAGGAAAAGAGATTGGATTTTGTCTTTGCGAATG
CCGGAGTCGCAGAAGACACGGTATTCTTTTCCCGGCATGATACTGGAATT
CCGCCACGGCCTGATATAGCTGGATTAACGGATATTAACTTGATCGGTGC
GATTTATACGAGTTACCTCGCCATGCACTATTTTCGCCGATCGCCGGAGA
AGACGGTGGGAAAAAGGAATTTGGTTATTATGTCAAGCATTGGCGGATTA
TATCCATGCATGCATACCCCGGTATACTCAGCGACAAAACATGCTCTGGT
TGGATTTACGCGCTCAGTGGGTAAACAACTGTGGAACGAGGGTGTGAAAG
TGAACGCGATTTGCCCAGGAGTGGTCCTCACGCCACTGCTAACACCAGAG
CTGAAGGCCTACTTTTCAGAGAATGTCCTGCTCACCATGAGTGATGTGAC
CAATGTGATATTAAAGCTGATCTCGGAGGAAGAAGTGACTGATTCAAAGG
GGACATTTGTGCCAGGTGATCAGCTTCATTCGCAAGCAATCCTAGTGTCG
GGTGAGAAATATTACTGTGTTGATATGCCGGAATATTTTGATGAGGAGAC
ACAATTAACCCATAAGCATATGATGGGTTGAATGGTCTTGGTAGCTCTTA
TCACAGGGGGAACTAGTGGCATCGGCCTCGACGTCGCTCAACAACTCGAC
GTGACAGGCCTCTGGAAAATTCACATCATCGGTAGCAACTTGAAACGTGG
CAAGGAGGCCGCTGCCTCGCTTAAAAATACCACATTTCACCAGACTGATG
TGACAAGTTACGAGCAGCAGGGCGCTACGTTTCATAAGATCTTCAATGAG
GAAAAGAGATTGGATTTTGTCTTTGCGAATGCCGGAGTCGCAGAAGACAC
GGTATTCTTTTCCCGGCATGATACTGGAATTCCGCCACGGCCTGATATAG
CTGGATTAACGGATATTAACTTGATCGGTGCGATTTATACGAGTTACCTC
GCCATGCACTATTTTCGCCGATCGCCGGAGAAGACGGTGGGAAAAAGGAA
TTTGGTTATTATGTCAAGCATTGGCGGATTATATCCATGCATGCATACCC
CGGTATACTCAGCGACAAAACATGCTCTGGTTGGATTTACGCGCTCAGTG
GGTAAACAACTGTGGAACGAGGGTGTGAAAGTGAACGCGATTTGCCCAGG
AGTGGTCCTCACGCCACTGCTAACACCAGAGCTGAAGGCCTACTTTTCAG
AGAATGTCCTGCTCACCATGAGTGATGTGACCAATGTGATATTAAAGCTG
ATCTCGGAGGAAGAAGTGACTGATTCAAAGGGGACATTTGTGCCAGGTGA
TCAGCTTCATTCGCAAGCAATCCTAGTGTCGGGTGAGAAATATTACTGTG
TTGATATGCCGGAATATTTTGATGAGGAGACACAATTAACCCATAAGCAT
ATGATGGGTTGAATGGTCTTGGTAGCTCTTATCACAGGGGGAACTAGTGG
CATCGGCCTCGACGTCGCTCAACAACTCGACGTGACAGGCCTCTGGAAAA
TTCACATCATCGGTAGCAACTTGAAACGTGGCAAGGAGGCCGCTGCCTCG
CTTAAAAATACCACATTTCACCAGACTGATGTGACAAGTTACGAGCAGCA
GGGCGCTACGTTTCATAAGATCTTCAATGAGGAAAAGAGATTGGATTTTG
TCTTTGCGAATGCCGGAGTCGCAGAAGACACGGTATTCTTTTCCCGGCAT
GATACTGGAATTCCGCCACGGCCTGATATAGCTGGATTAACGGATATTAA
CTTGATCGGTGCGATTTATACGAGTTACCTCGCCATGCACTATTTTCGCC
GATCGCCGGAGAAGACGGTGGGAAAAAGGAATTTGGTTATTATGTCAAGC
ATTGGCGGATTATATCCATGCATGCATACCCCGGTATACTCAGCGACAAA
ACATGCTCTGGTTGGATTTACGCGCTCAGTGGGTAAACAACTGTGGAACG
AGGGTGTGAAAGTGAACGCGATTTGCCCAGGAGTGGTCCTCACGCCACTG
CTAACACCAGAGCTGAAGGCCTACTTTTCAGAGAATGTCCTGCTCACCAT
GAGTGATGTGACCAATGTGATATTAAAGCTGATCTCGGAGGAAGAAGTGA
CTGATTCAAAGGGGACATTTGTGCCAGGTGATCAGCTTCATTCGCAAGCA
ATCCTAGTGTCGGGTGAGAAATATTACTGTGTTGATATGCCGGAATATTT
TGATGAGGAGACACAATTAACCCATAAGCATATGATGGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011207-T1.utr5p1 | KJC3_011207-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011207-T1.utr3p1 | KJC3_011207-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:32701..33836 + |
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