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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:92349..94130+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011229-T1 ID=KJC3_011229-T1|Name=KJC3_011229-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1782bp|location=Sequence derived from alignment at ch8:92349..94130+ (Aspergillus niger KJC3)
CTTTGTTTACTTCTTAAATTAAATACTTCTCTGCTGCAGGGTTCGTCGAT
CCTTGCATTCCGATCGAGTCCTCTTCCGCTAGATACTGCTAGTTGGTTTC
CAGCAGTTCGCCCTGCATCATGACGGCTCCGATATATCGCAAGGAGAAGC
TGGAACAGGCGCCCACTGATGTGGCCGAGCTGGCATCCGACGAGTCCACG
TCCAACGAGATCTGGAATGCGCTGGTGACCGAAGGTAGGCTGCAGCTCAA
TTCGTCTGTTTGAACCGAGGCTAAGTCGCGGGGATGCCGGGATATAGACC
ATCAACATGAGATCCAACTCCGAACCATGTCCTGGCAAAAGGCCGCCTGG
TTGCTCGCCGGAGACCAAGTCTGTCTGGCCATCATGGCTCAGTCCTGGTC
ACTCTCGTAAGTCAAGAGCAAAAATGTCCAATGACCACAAAACTGACCAT
CATTGTCCCTCAGCGTGCTCGGATGGGTGCCCGGCATCATCACCATGGTT
GTGTCCGGCGCTCTCTTCTGGGTCACCTCCCTCACCATGCACAAGTACAT
CATGAAGCACCCGCAAATCAGGAACATTTGTAGGAGCTCCTCTCTTCCCA
TGTCTCCTGTGATAGGATTCTGAGACTGACTCGAGTTCGTCCCCCCGGAC
AGGCGACTTTGGCTACTATGTCTTCGGCAAAAGCCAGACGGCGTACATCT
TTTCCGGCTTCATGTTGCTGGCTAACAACATCCTGCTGATCGGTTTCCAC
ATCCTGACTGGAGCCAAGGTGCTTGATACACTGTCCGATCACTCCCTGTG
TACCGTGACCTTCTCTGCGATCGTCATGGTCATGGGCATCGTCCTGTCCG
CCCCAAGAACCCTGCGTCATGTCTCCTTCATGTCGATGTTCTCAGGTAAG
TGAACTCATGTCACTGCAATGTTTGCAACCTGTGATTCGCTAACAATGTC
AGCGGCTTGTATGGGTCTGGCCATCCTGTTGTTCCTCATTTTCGCGGGAA
TCGAGACGGCACCCCTGGACTTTCCGACCGATGGTCCTGTGCGAACATAC
GCCTTCCCCTTGCCCGGCACCAGCTGGGTGGATTGCATGAACGCCGTGCT
GAACATCACCTTCCTCTGGGTGCCCCAGATTCTCTTCCCCACCTTCATCG
CGGAGATGGAGCACCCGGAGGACTTCCCCAAGTCGTTGGCGGTCTTGGCC
ATCATTTCCACCGTTCTCTTCATCGTGCCGCCCGCCATCGGCTTCCGCTA
CCTGGGCCAATACGCCACTGCACCCGCTTTTGGCAGTCTGGGTCTTGTGA
AGTACAGGAAGGCCTCCTTTGGTTTTGTCATCGTGCCTACATTGATCATC
GGCGCCATCTACGCCAACGTCACCGCTAAATTCATCTATTCTCACCTGTT
GGGTACCTCCAGACACGCACACAGCAACACCGTCGTGGGATGGGGAGTGT
GGGCCCTGGTGATGATTGGCATCTGGGTACTGGGATTCATCTTTTCCGAG
GTCGTCCCCAGCATGGGCGACTTTCTGTCGTTACTGGGTGCCGCCTTTGA
CTCCTTCTTCGGCTTCATCTTCTTCGCCGTAGCGTACTGGCATTTGTACC
GGGGGAAGCTCTTTGCGGGACTCGGGCGCACGAGCATGACCCTGCTGCAT
GCCTTCATCATGGCTTGTGGCCTGTTTCTGTTGGGACCGGGTTTGTATGC
GGCAGTCGAGGCCATCATCACGGATTACTCGGGGTCGGTTTCCCCGGCGT
TCAGTTGTGCCAGTCTGGGAATCTGATGGGCG back to topCoding sequence (CDS) from alignment at ch8:92349..94130+ >KJC3_011229-T1 ID=KJC3_011229-T1|Name=KJC3_011229-T1|organism=Aspergillus niger KJC3|type=CDS|length=7035bp|location=Sequence derived from alignment at ch8:92349..94130+ (Aspergillus niger KJC3)
ATGACGGCTCCGATATATCGCAAGGAGAAGCTGGAACAGGCGCCCACTGA
TGTGGCCGAGCTGGCATCCGACGAGTCCACGTCCAACGAGATCTGGAATG
CGCTGGTGACCGAAGACCATCAACATGAGATCCAACTCCGAACCATGTCC
TGGCAAAAGGCCGCCTGGTTGCTCGCCGGAGACCAAGTCTGTCTGGCCAT
CATGGCTCAGTCCTGGTCACTCTCCGTGCTCGGATGGGTGCCCGGCATCA
TCACCATGGTTGTGTCCGGCGCTCTCTTCTGGGTCACCTCCCTCACCATG
CACAAGTACATCATGAAGCACCCGCAAATCAGGAACATTTGCGACTTTGG
CTACTATGTCTTCGGCAAAAGCCAGACGGCGTACATCTTTTCCGGCTTCA
TGTTGCTGGCTAACAACATCCTGCTGATCGGTTTCCACATCCTGACTGGA
GCCAAGGTGCTTGATACACTGTCCGATCACTCCCTGTGTACCGTGACCTT
CTCTGCGATCGTCATGGTCATGGGCATCGTCCTGTCCGCCCCAAGAACCC
TGCGTCATGTCTCCTTCATGTCGATGTTCTCAGCGGCTTGTATGGGTCTG
GCCATCCTGTTGTTCCTCATTTTCGCGGGAATCGAGACGGCACCCCTGGA
CTTTCCGACCGATGGTCCTGTGCGAACATACGCCTTCCCCTTGCCCGGCA
CCAGCTGGGTGGATTGCATGAACGCCGTGCTGAACATCACCTTCCTCTGG
GTGCCCCAGATTCTCTTCCCCACCTTCATCGCGGAGATGGAGCACCCGGA
GGACTTCCCCAAGTCGTTGGCGGTCTTGGCCATCATTTCCACCGTTCTCT
TCATCGTGCCGCCCGCCATCGGCTTCCGCTACCTGGGCCAATACGCCACT
GCACCCGCTTTTGGCAGTCTGGGTCTTGTGAAGTACAGGAAGGCCTCCTT
TGGTTTTGTCATCGTGCCTACATTGATCATCGGCGCCATCTACGCCAACG
TCACCGCTAAATTCATCTATTCTCACCTGTTGGGTACCTCCAGACACGCA
CACAGCAACACCGTCGTGGGATGGGGAGTGTGGGCCCTGGTGATGATTGG
CATCTGGGTACTGGGATTCATCTTTTCCGAGGTCGTCCCCAGCATGGGCG
ACTTTCTGTCGTTACTGGGTGCCGCCTTTGACTCCTTCTTCGGCTTCATC
TTCTTCGCCGTAGCGTACTGGCATTTGTACCGGGGGAAGCTCTTTGCGGG
ACTCGGGCGCACGAGCATGACCCTGCTGCATGCCTTCATCATGGCTTGTG
GCCTGTTTCTGTTGGGACCGGGTTTGTATGCGGCAGTCGAGGCCATCATC
ACGGATTACTCGGGGTCGGTTTCCCCGGCGTTCAGTTGTGCCAGTCTGGG
AATCTGAATGACGGCTCCGATATATCGCAAGGAGAAGCTGGAACAGGCGC
CCACTGATGTGGCCGAGCTGGCATCCGACGAGTCCACGTCCAACGAGATC
TGGAATGCGCTGGTGACCGAAGACCATCAACATGAGATCCAACTCCGAAC
CATGTCCTGGCAAAAGGCCGCCTGGTTGCTCGCCGGAGACCAAGTCTGTC
TGGCCATCATGGCTCAGTCCTGGTCACTCTCCGTGCTCGGATGGGTGCCC
GGCATCATCACCATGGTTGTGTCCGGCGCTCTCTTCTGGGTCACCTCCCT
CACCATGCACAAGTACATCATGAAGCACCCGCAAATCAGGAACATTTGCG
ACTTTGGCTACTATGTCTTCGGCAAAAGCCAGACGGCGTACATCTTTTCC
GGCTTCATGTTGCTGGCTAACAACATCCTGCTGATCGGTTTCCACATCCT
GACTGGAGCCAAGGTGCTTGATACACTGTCCGATCACTCCCTGTGTACCG
TGACCTTCTCTGCGATCGTCATGGTCATGGGCATCGTCCTGTCCGCCCCA
AGAACCCTGCGTCATGTCTCCTTCATGTCGATGTTCTCAGCGGCTTGTAT
GGGTCTGGCCATCCTGTTGTTCCTCATTTTCGCGGGAATCGAGACGGCAC
CCCTGGACTTTCCGACCGATGGTCCTGTGCGAACATACGCCTTCCCCTTG
CCCGGCACCAGCTGGGTGGATTGCATGAACGCCGTGCTGAACATCACCTT
CCTCTGGGTGCCCCAGATTCTCTTCCCCACCTTCATCGCGGAGATGGAGC
ACCCGGAGGACTTCCCCAAGTCGTTGGCGGTCTTGGCCATCATTTCCACC
GTTCTCTTCATCGTGCCGCCCGCCATCGGCTTCCGCTACCTGGGCCAATA
CGCCACTGCACCCGCTTTTGGCAGTCTGGGTCTTGTGAAGTACAGGAAGG
CCTCCTTTGGTTTTGTCATCGTGCCTACATTGATCATCGGCGCCATCTAC
GCCAACGTCACCGCTAAATTCATCTATTCTCACCTGTTGGGTACCTCCAG
ACACGCACACAGCAACACCGTCGTGGGATGGGGAGTGTGGGCCCTGGTGA
TGATTGGCATCTGGGTACTGGGATTCATCTTTTCCGAGGTCGTCCCCAGC
ATGGGCGACTTTCTGTCGTTACTGGGTGCCGCCTTTGACTCCTTCTTCGG
CTTCATCTTCTTCGCCGTAGCGTACTGGCATTTGTACCGGGGGAAGCTCT
TTGCGGGACTCGGGCGCACGAGCATGACCCTGCTGCATGCCTTCATCATG
GCTTGTGGCCTGTTTCTGTTGGGACCGGGTTTGTATGCGGCAGTCGAGGC
CATCATCACGGATTACTCGGGGTCGGTTTCCCCGGCGTTCAGTTGTGCCA
GTCTGGGAATCTGAATGACGGCTCCGATATATCGCAAGGAGAAGCTGGAA
CAGGCGCCCACTGATGTGGCCGAGCTGGCATCCGACGAGTCCACGTCCAA
CGAGATCTGGAATGCGCTGGTGACCGAAGACCATCAACATGAGATCCAAC
TCCGAACCATGTCCTGGCAAAAGGCCGCCTGGTTGCTCGCCGGAGACCAA
GTCTGTCTGGCCATCATGGCTCAGTCCTGGTCACTCTCCGTGCTCGGATG
GGTGCCCGGCATCATCACCATGGTTGTGTCCGGCGCTCTCTTCTGGGTCA
CCTCCCTCACCATGCACAAGTACATCATGAAGCACCCGCAAATCAGGAAC
ATTTGCGACTTTGGCTACTATGTCTTCGGCAAAAGCCAGACGGCGTACAT
CTTTTCCGGCTTCATGTTGCTGGCTAACAACATCCTGCTGATCGGTTTCC
ACATCCTGACTGGAGCCAAGGTGCTTGATACACTGTCCGATCACTCCCTG
TGTACCGTGACCTTCTCTGCGATCGTCATGGTCATGGGCATCGTCCTGTC
CGCCCCAAGAACCCTGCGTCATGTCTCCTTCATGTCGATGTTCTCAGCGG
CTTGTATGGGTCTGGCCATCCTGTTGTTCCTCATTTTCGCGGGAATCGAG
ACGGCACCCCTGGACTTTCCGACCGATGGTCCTGTGCGAACATACGCCTT
CCCCTTGCCCGGCACCAGCTGGGTGGATTGCATGAACGCCGTGCTGAACA
TCACCTTCCTCTGGGTGCCCCAGATTCTCTTCCCCACCTTCATCGCGGAG
ATGGAGCACCCGGAGGACTTCCCCAAGTCGTTGGCGGTCTTGGCCATCAT
TTCCACCGTTCTCTTCATCGTGCCGCCCGCCATCGGCTTCCGCTACCTGG
GCCAATACGCCACTGCACCCGCTTTTGGCAGTCTGGGTCTTGTGAAGTAC
AGGAAGGCCTCCTTTGGTTTTGTCATCGTGCCTACATTGATCATCGGCGC
CATCTACGCCAACGTCACCGCTAAATTCATCTATTCTCACCTGTTGGGTA
CCTCCAGACACGCACACAGCAACACCGTCGTGGGATGGGGAGTGTGGGCC
CTGGTGATGATTGGCATCTGGGTACTGGGATTCATCTTTTCCGAGGTCGT
CCCCAGCATGGGCGACTTTCTGTCGTTACTGGGTGCCGCCTTTGACTCCT
TCTTCGGCTTCATCTTCTTCGCCGTAGCGTACTGGCATTTGTACCGGGGG
AAGCTCTTTGCGGGACTCGGGCGCACGAGCATGACCCTGCTGCATGCCTT
CATCATGGCTTGTGGCCTGTTTCTGTTGGGACCGGGTTTGTATGCGGCAG
TCGAGGCCATCATCACGGATTACTCGGGGTCGGTTTCCCCGGCGTTCAGT
TGTGCCAGTCTGGGAATCTGAATGACGGCTCCGATATATCGCAAGGAGAA
GCTGGAACAGGCGCCCACTGATGTGGCCGAGCTGGCATCCGACGAGTCCA
CGTCCAACGAGATCTGGAATGCGCTGGTGACCGAAGACCATCAACATGAG
ATCCAACTCCGAACCATGTCCTGGCAAAAGGCCGCCTGGTTGCTCGCCGG
AGACCAAGTCTGTCTGGCCATCATGGCTCAGTCCTGGTCACTCTCCGTGC
TCGGATGGGTGCCCGGCATCATCACCATGGTTGTGTCCGGCGCTCTCTTC
TGGGTCACCTCCCTCACCATGCACAAGTACATCATGAAGCACCCGCAAAT
CAGGAACATTTGCGACTTTGGCTACTATGTCTTCGGCAAAAGCCAGACGG
CGTACATCTTTTCCGGCTTCATGTTGCTGGCTAACAACATCCTGCTGATC
GGTTTCCACATCCTGACTGGAGCCAAGGTGCTTGATACACTGTCCGATCA
CTCCCTGTGTACCGTGACCTTCTCTGCGATCGTCATGGTCATGGGCATCG
TCCTGTCCGCCCCAAGAACCCTGCGTCATGTCTCCTTCATGTCGATGTTC
TCAGCGGCTTGTATGGGTCTGGCCATCCTGTTGTTCCTCATTTTCGCGGG
AATCGAGACGGCACCCCTGGACTTTCCGACCGATGGTCCTGTGCGAACAT
ACGCCTTCCCCTTGCCCGGCACCAGCTGGGTGGATTGCATGAACGCCGTG
CTGAACATCACCTTCCTCTGGGTGCCCCAGATTCTCTTCCCCACCTTCAT
CGCGGAGATGGAGCACCCGGAGGACTTCCCCAAGTCGTTGGCGGTCTTGG
CCATCATTTCCACCGTTCTCTTCATCGTGCCGCCCGCCATCGGCTTCCGC
TACCTGGGCCAATACGCCACTGCACCCGCTTTTGGCAGTCTGGGTCTTGT
GAAGTACAGGAAGGCCTCCTTTGGTTTTGTCATCGTGCCTACATTGATCA
TCGGCGCCATCTACGCCAACGTCACCGCTAAATTCATCTATTCTCACCTG
TTGGGTACCTCCAGACACGCACACAGCAACACCGTCGTGGGATGGGGAGT
GTGGGCCCTGGTGATGATTGGCATCTGGGTACTGGGATTCATCTTTTCCG
AGGTCGTCCCCAGCATGGGCGACTTTCTGTCGTTACTGGGTGCCGCCTTT
GACTCCTTCTTCGGCTTCATCTTCTTCGCCGTAGCGTACTGGCATTTGTA
CCGGGGGAAGCTCTTTGCGGGACTCGGGCGCACGAGCATGACCCTGCTGC
ATGCCTTCATCATGGCTTGTGGCCTGTTTCTGTTGGGACCGGGTTTGTAT
GCGGCAGTCGAGGCCATCATCACGGATTACTCGGGGTCGGTTTCCCCGGC
GTTCAGTTGTGCCAGTCTGGGAATCTGAATGACGGCTCCGATATATCGCA
AGGAGAAGCTGGAACAGGCGCCCACTGATGTGGCCGAGCTGGCATCCGAC
GAGTCCACGTCCAACGAGATCTGGAATGCGCTGGTGACCGAAGACCATCA
ACATGAGATCCAACTCCGAACCATGTCCTGGCAAAAGGCCGCCTGGTTGC
TCGCCGGAGACCAAGTCTGTCTGGCCATCATGGCTCAGTCCTGGTCACTC
TCCGTGCTCGGATGGGTGCCCGGCATCATCACCATGGTTGTGTCCGGCGC
TCTCTTCTGGGTCACCTCCCTCACCATGCACAAGTACATCATGAAGCACC
CGCAAATCAGGAACATTTGCGACTTTGGCTACTATGTCTTCGGCAAAAGC
CAGACGGCGTACATCTTTTCCGGCTTCATGTTGCTGGCTAACAACATCCT
GCTGATCGGTTTCCACATCCTGACTGGAGCCAAGGTGCTTGATACACTGT
CCGATCACTCCCTGTGTACCGTGACCTTCTCTGCGATCGTCATGGTCATG
GGCATCGTCCTGTCCGCCCCAAGAACCCTGCGTCATGTCTCCTTCATGTC
GATGTTCTCAGCGGCTTGTATGGGTCTGGCCATCCTGTTGTTCCTCATTT
TCGCGGGAATCGAGACGGCACCCCTGGACTTTCCGACCGATGGTCCTGTG
CGAACATACGCCTTCCCCTTGCCCGGCACCAGCTGGGTGGATTGCATGAA
CGCCGTGCTGAACATCACCTTCCTCTGGGTGCCCCAGATTCTCTTCCCCA
CCTTCATCGCGGAGATGGAGCACCCGGAGGACTTCCCCAAGTCGTTGGCG
GTCTTGGCCATCATTTCCACCGTTCTCTTCATCGTGCCGCCCGCCATCGG
CTTCCGCTACCTGGGCCAATACGCCACTGCACCCGCTTTTGGCAGTCTGG
GTCTTGTGAAGTACAGGAAGGCCTCCTTTGGTTTTGTCATCGTGCCTACA
TTGATCATCGGCGCCATCTACGCCAACGTCACCGCTAAATTCATCTATTC
TCACCTGTTGGGTACCTCCAGACACGCACACAGCAACACCGTCGTGGGAT
GGGGAGTGTGGGCCCTGGTGATGATTGGCATCTGGGTACTGGGATTCATC
TTTTCCGAGGTCGTCCCCAGCATGGGCGACTTTCTGTCGTTACTGGGTGC
CGCCTTTGACTCCTTCTTCGGCTTCATCTTCTTCGCCGTAGCGTACTGGC
ATTTGTACCGGGGGAAGCTCTTTGCGGGACTCGGGCGCACGAGCATGACC
CTGCTGCATGCCTTCATCATGGCTTGTGGCCTGTTTCTGTTGGGACCGGG
TTTGTATGCGGCAGTCGAGGCCATCATCACGGATTACTCGGGGTCGGTTT
CCCCGGCGTTCAGTTGTGCCAGTCTGGGAATCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011229-T1.utr5p1 | KJC3_011229-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011229-T1.utr3p1 | KJC3_011229-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013057 |
| DBxref | PFAM:PF01490 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:92349..94130 + |
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