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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:145620..146815+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011245-T1 ID=KJC3_011245-T1|Name=KJC3_011245-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1196bp|location=Sequence derived from alignment at ch8:145620..146815+ (Aspergillus niger KJC3)
GTACCTGCCTCATCCCAGTCACCATCATGGGGTCCAACAGCTATATAAGG
CCCTTCGAGGTCTCTTCCAGTCCATCCTCATCATCGCAACAGACATCAAG
CATCTACTACTATCATAACAATAACAACCACTTTATCAAACGCAACCAAC
GCATACTACACCTCCTACTACTACTATCATCATAACAACTTCTATCAACA
ACTTCATCCAATTCATACGTAACACAATGTCTCTCTTCCGAACCATCCCT
ACTGCTGGCGACTTCGCCCCTCTCTTCCGCCTGCTGGACGACTATGATCT
CCACCGCTCCAGCCAGGGCTCCTCGGTGACTTCTGCTCGCACCTTCGCGC
CTCGCTTCGACGTCCGCGAGACCTCGGATGGCTACCACCTTGATGGCGAG
CTGCCCGGTATCGCTCAGAAGGATGTCGACATTGAGTTCTCTGACCCTCA
GACTCTTGTGATCAAGGGTCGCACTGAGCGCGAATACCACTCCTCGGACA
ATGACGAGGCCCAGAACACCCCTACCCCGGAGAGCACCAACAACAACAAC
CAGGGTGAGGGCAGCGCTGTCGTCCCCTCTGGCGACAAGCAGGTCTCCAA
GAACAAGTCCAAGGCCAAGCACCACTACTGGGTCAGCGAGCGCTCCGTTG
GCGAGTTCCACCGCACCTTCTCCTTCCCTACTCGCGTCAACCAGGACGCC
GTCAAGGCTTCCTTGAAGAATGGCATCCTCTCCATCTTTGTGCCTAAGGC
GGCTGCTCCTTCTTCGAAGAAGATCACCATCGAGTAAAGGATGATCGATC
GGTGGTGCGATGAATAACGACTTGATGATGGATTTCGAAATTGTTCCATA
GCGCGTGATCGTTTTACTCTGTTGTCTTCATTCCCTTTTGCTTCTGATCT
GAGCCAGAATGTCGGGGGACTAGTGTCTAATAGTGGAGGTGTGCATTCTC
AGTCGTTGCTGGGTTTTCGCTCCCTTTCTAGTGTTGTTATCCTAGTAATA
CTATACATTAATTCAATCCTTGAGTTCTCTCTTTCGCTCCCTTTGTAGTA
TTCATGTAGAAGTAATGACTCGTGTTGGTAATCTAGAACATCGCAATCAA
TCTCGACATTGTTATATTATACCATCACCCCTCTATTTGTTTTGATATCC
AGCGGTGCTCGTCTGCCGTGGTAGTTGCCGCTATCGCCAAGCCCGG back to topCoding sequence (CDS) from alignment at ch8:145620..146815+ >KJC3_011245-T1 ID=KJC3_011245-T1|Name=KJC3_011245-T1|organism=Aspergillus niger KJC3|type=CDS|length=561bp|location=Sequence derived from alignment at ch8:145620..146815+ (Aspergillus niger KJC3)
ATGTCTCTCTTCCGAACCATCCCTACTGCTGGCGACTTCGCCCCTCTCTT
CCGCCTGCTGGACGACTATGATCTCCACCGCTCCAGCCAGGGCTCCTCGG
TGACTTCTGCTCGCACCTTCGCGCCTCGCTTCGACGTCCGCGAGACCTCG
GATGGCTACCACCTTGATGGCGAGCTGCCCGGTATCGCTCAGAAGGATGT
CGACATTGAGTTCTCTGACCCTCAGACTCTTGTGATCAAGGGTCGCACTG
AGCGCGAATACCACTCCTCGGACAATGACGAGGCCCAGAACACCCCTACC
CCGGAGAGCACCAACAACAACAACCAGGGTGAGGGCAGCGCTGTCGTCCC
CTCTGGCGACAAGCAGGTCTCCAAGAACAAGTCCAAGGCCAAGCACCACT
ACTGGGTCAGCGAGCGCTCCGTTGGCGAGTTCCACCGCACCTTCTCCTTC
CCTACTCGCGTCAACCAGGACGCCGTCAAGGCTTCCTTGAAGAATGGCAT
CCTCTCCATCTTTGTGCCTAAGGCGGCTGCTCCTTCTTCGAAGAAGATCA
CCATCGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011245-T1.utr5p1 | KJC3_011245-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011245-T1.utr3p1 | KJC3_011245-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.1 |
| DBxref | InterPro:IPR008978 |
| DBxref | InterPro:IPR002068 |
| DBxref | PFAM:PF00011 |
| DBxref | PFAM:PF17886 |
| Product | heat shock protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:145620..146815 + |
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