|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:154876..157321+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011251-T1 ID=KJC3_011251-T1|Name=KJC3_011251-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2446bp|location=Sequence derived from alignment at ch8:154876..157321+ (Aspergillus niger KJC3)
CAGATGCCAGCCTGTGATCCTTATATCTCTGCCTCCACAAATGAGAGGCC
CACTTCCCTGGACTAGCCAGTCAAACAGGACCCATGGCATCCTGGTGGCT
CTACTTAATGCTGTAGTGCTGCCAGGGAACCTGGCAATCATAAATTTGCA
GTCTCCACATTTCAGATTTGCTTAGCAGGTCCCTCTTTCAATGTAGGTCT
AAAATGACCCCGATCGATAGCACTGAAGTTTTGACAGCCGCTCAGCCTCG
CGAGGTGCACGAGCAATGGCCTACCCTTCGCCGGTATATAATGCAGGGTC
TTCCTTCCAGAATTGGTGCAATTCACAGCTTTCCTTTTCTCTCTCACCCA
AAGGTTTAGTATCGGATTGATCACCGTTATAAGTCGATGACCATGGCTGA
GTCTGATACCGTTGTCTCAGTCGCAAGTGACCCTGCGTCATCCAATCAAG
CTAAAAAGGGCCTCAAGGCGAAAGAAGAAAAGATTGGAATAACATCTCAC
TGGACCTTCATAATATGGAGCTGGTTTCTACTCACAGTTCCTCTCTCATC
ACTGACAGCTGTCTTCCTCGCACTGGTCTTCAGCTACCGGATTGGCCATG
GAGACTCGCCGTTTGAGAACCTCCGCGTGGGCCTCGCAACAGAAGGTTCA
TCGGATGCGTACTATGTCAACATGAATTCGAGTATCCTCCTTTTCGTGAC
TTCATGGGCTAGCACCTTGGCTCCCATGCTGTCGGGCTTTCTCATCACCC
TTGCGTCGTTTCCCATCGCCAAAAGGTACCTCGAGAACATACAGCAAGGA
CGTTTTGAACGGTTACCTACCCCGTATCAATTGACGCTTATGCTCAAGTT
CTTTGACGGGGGCACTTTGGGAGCAACCTGGAGCTGGATTGTGTACCTCG
TCTCGTGGAAAAAGAAGCGTCAGCCTCAGACTCCCACGCTGTTCTCAGCA
GCCTCTGTGGCTTTGCTAGCGACATTACTTGGGTATGTACAGCGCTAAAG
CATGCACCCCCATAACCTGTTTTGTCCATTGTCTGATAAATTTCGATTCA
GAGCGTTGGTTTCATTGGCAGATACCTGGCTTCACTTGACTACGACAACT
GTCTCCTTCACTCGTGCCACTGTCGCCACAAACAATACCGACTACAGCTT
TGGCCTGACCCCCCAGTGTCTGAAAGGCAACAACTCGGTCGCAGCACAGG
AAGATACTGGTCTATGCAGTGTCTCGATGGCTGTCACGGGCCAATTCCTG
GCAAATGCAACCGTCAGTCTCGGCGTGCTCAACAATGTCTCCGATTTTGC
GACCGTGTACACCTACGACAACAACAGTACGATGTACAGCTACCTAGGAA
TACCAGACGGCACTGCCTCTGTGACCGACCGGGATTATGAAGCTCAAACA
TATGGTGCTGCGACGCAGTGCGATTTGTTCTCCAAAAGATGCAACTTGAC
CGAAGTGACGACCTCTCTCCGATACAATTGCTCGAGTGCCTTTGCCGGCT
TCATCGACTCTACTGAATTAATCACAGGCTTCTTCACGGACTCCAGCATG
ACCACTGACATCGAGGACAACGAGACGTCCAACTATGGAACTGGAAACCC
ATTTTACTACGTGATCGCCGGCGTACTAAGCACCTCCGGTGGAACCGTCC
CCAACTCGACAGAGTTCGTGCAGAACGAGTCCGGCGTATATGGCTACGTT
CTCGGCTGCAACACAACAATTTACGACATTGTATACGATCGCGTCAACAA
CTCTGTGACCCGCTTTTTACCCACCGACAGCAACACCTCGGTATCCAACA
TCTGGCAGACGAGTATCGCGCAGACCGTCGACTGGGAACCGTCCATCGAG
CTGGAGATCGGGGCCGCTGCGTTCAGCCAAACGGGCCAAGAATTCGCGGA
CAAGATCGCCCAGTCATTCAGCAAGGTGATCCTGGCCCTTGGAGCAGACG
GAGTTGAATCACGCCCAGCACTAGCAGCCCAGCAGAGGGAGACTTCCCTT
GTATCGCGGGTTCCCATGGCTCCGCTCTTCACCTTGGTTGCCGTGAACTT
CTTGTATGTCATCGTGGGCTTGATTTTTGCTGGAATAGCTATCAAGACCG
CAAGAGGAGCAGTCCCTGATATCCATGCTCGGCTTGGAATAACGGGTCTC
GTAGCAGATCGGTTCGAGGACCCTGGATCGCGCAAGGAGGTCCATTCTGC
TGATGACATGTTTGAAGAGTATGCCGGACATCCGAGCCGACGGGTAGCTG
TGGAGCCGGAGGATGAAGATGGGGTGTATGTGTTCAAGAGTTGGGATACA
TCTAAATCGAGTTCGGTGGAAGTGAGGGAAGGGTCTGTGGCGGTTCAGAG
ACCTGCGCTGAGTGGTGAGGCTGCTTGATTCTATAACCATCTGTCATAGA
AATAGACCATCCAAGTAAAGTGGCAAAAAAACTTTTAGTTGGCTTT back to topCoding sequence (CDS) from alignment at ch8:154876..157321+ >KJC3_011251-T1 ID=KJC3_011251-T1|Name=KJC3_011251-T1|organism=Aspergillus niger KJC3|type=CDS|length=3846bp|location=Sequence derived from alignment at ch8:154876..157321+ (Aspergillus niger KJC3)
ATGACCATGGCTGAGTCTGATACCGTTGTCTCAGTCGCAAGTGACCCTGC
GTCATCCAATCAAGCTAAAAAGGGCCTCAAGGCGAAAGAAGAAAAGATTG
GAATAACATCTCACTGGACCTTCATAATATGGAGCTGGTTTCTACTCACA
GTTCCTCTCTCATCACTGACAGCTGTCTTCCTCGCACTGGTCTTCAGCTA
CCGGATTGGCCATGGAGACTCGCCGTTTGAGAACCTCCGCGTGGGCCTCG
CAACAGAAGGTTCATCGGATGCGTACTATGTCAACATGAATTCGAGTATC
CTCCTTTTCGTGACTTCATGGGCTAGCACCTTGGCTCCCATGCTGTCGGG
CTTTCTCATCACCCTTGCGTCGTTTCCCATCGCCAAAAGGTACCTCGAGA
ACATACAGCAAGGACGTTTTGAACGGTTACCTACCCCGTATCAATTGACG
CTTATGCTCAAGTTCTTTGACGGGGGCACTTTGGGAGCAACCTGGAGCTG
GATTGTGTACCTCGTCTCGTGGAAAAAGAAGCGTCAGCCTCAGACTCCCA
CGCTGTTCTCAGCAGCCTCTGTGGCTTTGCTAGCGACATTACTTGGAGCG
TTGGTTTCATTGGCAGATACCTGGCTTCACTTGACTACGACAACTGTCTC
CTTCACTCGTGCCACTGTCGCCACAAACAATACCGACTACAGCTTTGGCC
TGACCCCCCAGTGTCTGAAAGGCAACAACTCGGTCGCAGCACAGGAAGAT
ACTGGTCTATGCAGTGTCTCGATGGCTGTCACGGGCCAATTCCTGGCAAA
TGCAACCGTCAGTCTCGGCGTGCTCAACAATGTCTCCGATTTTGCGACCG
TGTACACCTACGACAACAACAGTACGATGTACAGCTACCTAGGAATACCA
GACGGCACTGCCTCTGTGACCGACCGGGATTATGAAGCTCAAACATATGG
TGCTGCGACGCAGTGCGATTTGTTCTCCAAAAGATGCAACTTGACCGAAG
TGACGACCTCTCTCCGATACAATTGCTCGAGTGCCTTTGCCGGCTTCATC
GACTCTACTGAATTAATCACAGGCTTCTTCACGGACTCCAGCATGACCAC
TGACATCGAGGACAACGAGACGTCCAACTATGGAACTGGAAACCCATTTT
ACTACGTGATCGCCGGCGTACTAAGCACCTCCGGTGGAACCGTCCCCAAC
TCGACAGAGTTCGTGCAGAACGAGTCCGGCGTATATGGCTACGTTCTCGG
CTGCAACACAACAATTTACGACATTGTATACGATCGCGTCAACAACTCTG
TGACCCGCTTTTTACCCACCGACAGCAACACCTCGGTATCCAACATCTGG
CAGACGAGTATCGCGCAGACCGTCGACTGGGAACCGTCCATCGAGCTGGA
GATCGGGGCCGCTGCGTTCAGCCAAACGGGCCAAGAATTCGCGGACAAGA
TCGCCCAGTCATTCAGCAAGGTGATCCTGGCCCTTGGAGCAGACGGAGTT
GAATCACGCCCAGCACTAGCAGCCCAGCAGAGGGAGACTTCCCTTGTATC
GCGGGTTCCCATGGCTCCGCTCTTCACCTTGGTTGCCGTGAACTTCTTGT
ATGTCATCGTGGGCTTGATTTTTGCTGGAATAGCTATCAAGACCGCAAGA
GGAGCAGTCCCTGATATCCATGCTCGGCTTGGAATAACGGGTCTCGTAGC
AGATCGGTTCGAGGACCCTGGATCGCGCAAGGAGGTCCATTCTGCTGATG
ACATGTTTGAAGAGTATGCCGGACATCCGAGCCGACGGGTAGCTGTGGAG
CCGGAGGATGAAGATGGGGTGTATGTGTTCAAGAGTTGGGATACATCTAA
ATCGAGTTCGGTGGAAGTGAGGGAAGGGTCTGTGGCGGTTCAGAGACCTG
CGCTGAGTGGTGAGGCTGCTTGAATGACCATGGCTGAGTCTGATACCGTT
GTCTCAGTCGCAAGTGACCCTGCGTCATCCAATCAAGCTAAAAAGGGCCT
CAAGGCGAAAGAAGAAAAGATTGGAATAACATCTCACTGGACCTTCATAA
TATGGAGCTGGTTTCTACTCACAGTTCCTCTCTCATCACTGACAGCTGTC
TTCCTCGCACTGGTCTTCAGCTACCGGATTGGCCATGGAGACTCGCCGTT
TGAGAACCTCCGCGTGGGCCTCGCAACAGAAGGTTCATCGGATGCGTACT
ATGTCAACATGAATTCGAGTATCCTCCTTTTCGTGACTTCATGGGCTAGC
ACCTTGGCTCCCATGCTGTCGGGCTTTCTCATCACCCTTGCGTCGTTTCC
CATCGCCAAAAGGTACCTCGAGAACATACAGCAAGGACGTTTTGAACGGT
TACCTACCCCGTATCAATTGACGCTTATGCTCAAGTTCTTTGACGGGGGC
ACTTTGGGAGCAACCTGGAGCTGGATTGTGTACCTCGTCTCGTGGAAAAA
GAAGCGTCAGCCTCAGACTCCCACGCTGTTCTCAGCAGCCTCTGTGGCTT
TGCTAGCGACATTACTTGGAGCGTTGGTTTCATTGGCAGATACCTGGCTT
CACTTGACTACGACAACTGTCTCCTTCACTCGTGCCACTGTCGCCACAAA
CAATACCGACTACAGCTTTGGCCTGACCCCCCAGTGTCTGAAAGGCAACA
ACTCGGTCGCAGCACAGGAAGATACTGGTCTATGCAGTGTCTCGATGGCT
GTCACGGGCCAATTCCTGGCAAATGCAACCGTCAGTCTCGGCGTGCTCAA
CAATGTCTCCGATTTTGCGACCGTGTACACCTACGACAACAACAGTACGA
TGTACAGCTACCTAGGAATACCAGACGGCACTGCCTCTGTGACCGACCGG
GATTATGAAGCTCAAACATATGGTGCTGCGACGCAGTGCGATTTGTTCTC
CAAAAGATGCAACTTGACCGAAGTGACGACCTCTCTCCGATACAATTGCT
CGAGTGCCTTTGCCGGCTTCATCGACTCTACTGAATTAATCACAGGCTTC
TTCACGGACTCCAGCATGACCACTGACATCGAGGACAACGAGACGTCCAA
CTATGGAACTGGAAACCCATTTTACTACGTGATCGCCGGCGTACTAAGCA
CCTCCGGTGGAACCGTCCCCAACTCGACAGAGTTCGTGCAGAACGAGTCC
GGCGTATATGGCTACGTTCTCGGCTGCAACACAACAATTTACGACATTGT
ATACGATCGCGTCAACAACTCTGTGACCCGCTTTTTACCCACCGACAGCA
ACACCTCGGTATCCAACATCTGGCAGACGAGTATCGCGCAGACCGTCGAC
TGGGAACCGTCCATCGAGCTGGAGATCGGGGCCGCTGCGTTCAGCCAAAC
GGGCCAAGAATTCGCGGACAAGATCGCCCAGTCATTCAGCAAGGTGATCC
TGGCCCTTGGAGCAGACGGAGTTGAATCACGCCCAGCACTAGCAGCCCAG
CAGAGGGAGACTTCCCTTGTATCGCGGGTTCCCATGGCTCCGCTCTTCAC
CTTGGTTGCCGTGAACTTCTTGTATGTCATCGTGGGCTTGATTTTTGCTG
GAATAGCTATCAAGACCGCAAGAGGAGCAGTCCCTGATATCCATGCTCGG
CTTGGAATAACGGGTCTCGTAGCAGATCGGTTCGAGGACCCTGGATCGCG
CAAGGAGGTCCATTCTGCTGATGACATGTTTGAAGAGTATGCCGGACATC
CGAGCCGACGGGTAGCTGTGGAGCCGGAGGATGAAGATGGGGTGTATGTG
TTCAAGAGTTGGGATACATCTAAATCGAGTTCGGTGGAAGTGAGGGAAGG
GTCTGTGGCGGTTCAGAGACCTGCGCTGAGTGGTGAGGCTGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011251-T1.utr5p1 | KJC3_011251-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011251-T1.utr3p1 | KJC3_011251-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:154876..157321 + |
|
