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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:181311..183023+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011265-T1 ID=KJC3_011265-T1|Name=KJC3_011265-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1713bp|location=Sequence derived from alignment at ch8:181311..183023+ (Aspergillus niger KJC3) ATGTACAAACCGGCACCACCGAGACCTAAAAAGACAAACATCATCCGCTC
CCGCAATGGCTGTAAAAGTTGCCGCAGTCGCAGAACCAAGTGTGATGAGC
GGAAGCCAAAATGCGGAACCTGCGCGAGACTTGGAAAGATCTGTGAATAT
GCTAGACCAGCTTTCAAATTTCAAGTTACGACAGTCGACGACCCGAGACC
ACCACCAGAGCCACTAGCAACAGCAACAGCGTCCAATGTGTCGTCAGAAG
AGACAACCCCAACACCGGCCGGAGACCAAACTTCGGTCGTTCGAGCCGCA
CAAGATGTTCCCTCTATCGGAAGCTATGACATTATCCGGTCATTGCAAAC
GACGGACCGCGATATCTTCTATACCACCTACTGGGAGGGCTCTTGCTTGC
CAGCCTTGCACCCGATATTCAATTTCGCCACCTCATTGGCCGCTGGTCAT
CCCATTCTCAACAACGCCCTCCTAGCTTTATCTGCCTGCAATATTGGCCG
CATTCAGGCCGAGCACAGAACAGAATCGTCTGGGTCGATGTGCTCATTGA
GTCCTAGTCTGGTCCACCAGACACGAAGTCATCTATACTACTCGTCCGCC
ATCCAAAAGCTGGCCATCATGCAATCACAAGACTACCATCAGAACTCAGC
CACGATACTGATTGTGCTTGTTCTGTTCGCTCATCTGGAGCAAGCTATGG
GGAATTTTCAGGGCTTCTACACTCACGTCCGGGGCATGATGAACCTTCTT
GAATGGCATGACGGCGTCAAAGACGCAGCCACCAAGTCGCTGCTTGCTTC
ATGGATGCAAATCCGGTATGTTGTCTGGTGGGCTCGGGCCTATTTCAGTT
CGATAGAAGTTTGTCAGCATCTCCCATCGATACCTTTACCGGCCTCCCTA
TTAGACGTCCCGCAGACATTGCATGAGCGACGTGTGAAAGTTCTTAGCAT
CATGTGTGAATCACACCGATTGAATTTCAACGCCGTGCTGCAGCAGTTTC
GGAATTTGCGGTCGGACGATGCTAGTGGTTTCGATTTCGACGAGCGCTAT
GTTTATTGCACTGCTCTATTGCATCAAGAAGCGGCAAAGCTGGATGCGTG
GGTGTTGCAACTTCCGCCATCTGAGCAGCCAATATACGAGCTCAACGACA
CAAACGGCACTACCATCCGTTTTCAGTCCCACGATGCCGCGCTGAACTAC
GCATACTACGTAGTTGCGCGAGCCATGCAGTGCACGGGGGTTTTACGACT
CCTCTACAATCCTGATACCCCTCAGCACGCACGGGAATGTGATGAAGAAG
AGTATTGGGTTCAGACATTAGTCCGTATTGCACAGTGGAGCGATATGCAG
ACATCAATCACCAAAAATAGCTACACCATCGGGTTCTCAGGCTTACTCCT
GGCGGGTATTCTCCGATGCCAGAGTCTAGCAGTCGGGTTGGAGATCCAGG
ACTGGTTACAGGCGCTCATAAACCTGCAACCAACAGAAGAAGGGGCATTT
CCGATCTATCAGACTTTTCATGTGGTCAAGATCATCAATCAACAGAGGGC
AATCGGCCGAGATATTTTTGCCGTCACTCAGCCGGTGGATGACGGAGGCG
GAACGCCCAAGCTTACTGGCTACAACAGTCAGTCGATCACAAGCCTTCTC
GTCCATGGGAAGTACCAGAATTTGGATTGCCTTTTCCAAGAGTGCATCTC
CCTGGATGTCTGA back to topCoding sequence (CDS) from alignment at ch8:181311..183023+ >KJC3_011265-T1 ID=KJC3_011265-T1|Name=KJC3_011265-T1|organism=Aspergillus niger KJC3|type=CDS|length=1713bp|location=Sequence derived from alignment at ch8:181311..183023+ (Aspergillus niger KJC3) ATGTACAAACCGGCACCACCGAGACCTAAAAAGACAAACATCATCCGCTC CCGCAATGGCTGTAAAAGTTGCCGCAGTCGCAGAACCAAGTGTGATGAGC GGAAGCCAAAATGCGGAACCTGCGCGAGACTTGGAAAGATCTGTGAATAT GCTAGACCAGCTTTCAAATTTCAAGTTACGACAGTCGACGACCCGAGACC ACCACCAGAGCCACTAGCAACAGCAACAGCGTCCAATGTGTCGTCAGAAG AGACAACCCCAACACCGGCCGGAGACCAAACTTCGGTCGTTCGAGCCGCA CAAGATGTTCCCTCTATCGGAAGCTATGACATTATCCGGTCATTGCAAAC GACGGACCGCGATATCTTCTATACCACCTACTGGGAGGGCTCTTGCTTGC CAGCCTTGCACCCGATATTCAATTTCGCCACCTCATTGGCCGCTGGTCAT CCCATTCTCAACAACGCCCTCCTAGCTTTATCTGCCTGCAATATTGGCCG CATTCAGGCCGAGCACAGAACAGAATCGTCTGGGTCGATGTGCTCATTGA GTCCTAGTCTGGTCCACCAGACACGAAGTCATCTATACTACTCGTCCGCC ATCCAAAAGCTGGCCATCATGCAATCACAAGACTACCATCAGAACTCAGC CACGATACTGATTGTGCTTGTTCTGTTCGCTCATCTGGAGCAAGCTATGG GGAATTTTCAGGGCTTCTACACTCACGTCCGGGGCATGATGAACCTTCTT GAATGGCATGACGGCGTCAAAGACGCAGCCACCAAGTCGCTGCTTGCTTC ATGGATGCAAATCCGGTATGTTGTCTGGTGGGCTCGGGCCTATTTCAGTT CGATAGAAGTTTGTCAGCATCTCCCATCGATACCTTTACCGGCCTCCCTA TTAGACGTCCCGCAGACATTGCATGAGCGACGTGTGAAAGTTCTTAGCAT CATGTGTGAATCACACCGATTGAATTTCAACGCCGTGCTGCAGCAGTTTC GGAATTTGCGGTCGGACGATGCTAGTGGTTTCGATTTCGACGAGCGCTAT GTTTATTGCACTGCTCTATTGCATCAAGAAGCGGCAAAGCTGGATGCGTG GGTGTTGCAACTTCCGCCATCTGAGCAGCCAATATACGAGCTCAACGACA CAAACGGCACTACCATCCGTTTTCAGTCCCACGATGCCGCGCTGAACTAC GCATACTACGTAGTTGCGCGAGCCATGCAGTGCACGGGGGTTTTACGACT CCTCTACAATCCTGATACCCCTCAGCACGCACGGGAATGTGATGAAGAAG AGTATTGGGTTCAGACATTAGTCCGTATTGCACAGTGGAGCGATATGCAG ACATCAATCACCAAAAATAGCTACACCATCGGGTTCTCAGGCTTACTCCT GGCGGGTATTCTCCGATGCCAGAGTCTAGCAGTCGGGTTGGAGATCCAGG ACTGGTTACAGGCGCTCATAAACCTGCAACCAACAGAAGAAGGGGCATTT CCGATCTATCAGACTTTTCATGTGGTCAAGATCATCAATCAACAGAGGGC AATCGGCCGAGATATTTTTGCCGTCACTCAGCCGGTGGATGACGGAGGCG GAACGCCCAAGCTTACTGGCTACAACAGTCAGTCGATCACAAGCCTTCTC GTCCATGGGAAGTACCAGAATTTGGATTGCCTTTTCCAAGAGTGCATCTC CCTGGATGTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
Term | Definition |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:181311..183023 + |
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