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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:186008..186858+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011267-T1 ID=KJC3_011267-T1|Name=KJC3_011267-T1|organism=Aspergillus niger KJC3|type=mRNA|length=851bp|location=Sequence derived from alignment at ch8:186008..186858+ (Aspergillus niger KJC3)
CCTTGCTACGCTTCAAGACATTCGCTATAATGACAAGAGCAAAGACATCC
ACGCTCAAAGTTCTTATGATTCATGGTACCACAATAACCGCAAACCCAGA
TATCATCACCACTACTAATTATGAATCCATGTTGATAGGCTATACTGAAA
CTGGAGAGTTCTTTCGCTCAGAAGTACTTGACCTGGAGAAGGCCCTTATC
GAAGCCTTTCCAGCAGCGCCTGCCCCTGGTTATCATCCCGATTACCCGGA
TGGTGTAGAGCTCGTGTACCCAGATGGCACCTGGAGACTCAAGCCAACCG
ATTGGGCCCGCTATATACCGGGGACCGATCCAGGTTTTGGATGGTTCTAC
AAGGTTGACGACGACGATGAATTTCCAGGCTTGCTCGATGGATTGCAAAA
GCTTGGTGATATTATGCGCTCGCAAGGGCCCTTTGCCGGGGTCATTGGAT
TTTCTCAAGGGGGTTTCTTGACCGGACTTATCACAAGCATGCTTGAGCCG
GGCAGGAAGAGTGTCTTCGAGAAAGTCGAAGTCGAAAGTGGAGGTATTCC
ATTCCCGAAGTCATTCGATGGAGTCGACCCTATTAAATTCTCGATCAGCT
GCTGTGGTTTCGCTGCATTGAACCTTCGATACAAAGCCTTTTATCTGCCA
AAGATTTCCGGGCCGATGCTTCATGTAAATGGGCAATTTGATGATATTGT
GTACGATAAAAGAAGTCGCACTCTGATTGATGCGACTACAGGTACTGAGG
AAGAGAAAGTGCTCATTCATCCGGGTGGTCATTCTGTGCCGACTAGCAAA
TTGTACACGGATGCGATGGTCATGTTCATCAAAAGTAAACTCTCGAGTTG
A back to topCoding sequence (CDS) from alignment at ch8:186008..186858+ >KJC3_011267-T1 ID=KJC3_011267-T1|Name=KJC3_011267-T1|organism=Aspergillus niger KJC3|type=CDS|length=1518bp|location=Sequence derived from alignment at ch8:186008..186858+ (Aspergillus niger KJC3)
ATGACAAGAGCAAAGACATCCACGCTCAAAGTTCTTATGATTCATGGCTA
TACTGAAACTGGAGAGTTCTTTCGCTCAGAAGTACTTGACCTGGAGAAGG
CCCTTATCGAAGCCTTTCCAGCAGCGCCTGCCCCTGGTTATCATCCCGAT
TACCCGGATGGTGTAGAGCTCGTGTACCCAGATGGCACCTGGAGACTCAA
GCCAACCGATTGGGCCCGCTATATACCGGGGACCGATCCAGGTTTTGGAT
GGTTCTACAAGGTTGACGACGACGATGAATTTCCAGGCTTGCTCGATGGA
TTGCAAAAGCTTGGTGATATTATGCGCTCGCAAGGGCCCTTTGCCGGGGT
CATTGGATTTTCTCAAGGGGGTTTCTTGACCGGACTTATCACAAGCATGC
TTGAGCCGGGCAGGAAGAGTGTCTTCGAGAAAGTCGAAGTCGAAAGTGGA
GGTATTCCATTCCCGAAGTCATTCGATGGAGTCGACCCTATTAAATTCTC
GATCAGCTGCTGTGGTTTCGCTGCATTGAACCTTCGATACAAAGCCTTTT
ATCTGCCAAAGATTTCCGGGCCGATGCTTCATGTAAATGGGCAATTTGAT
GATATTGTGTACGATAAAAGAAGTCGCACTCTGATTGATGCGACTACAGG
TACTGAGGAAGAGAAAGTGCTCATTCATCCGGGTGGTCATTCTGTGCCGA
CTAGCAAATTGTACACGGATGCGATGGTCATGTTCATCAAAAGTAAACTC
TCGAGTTGAATGACAAGAGCAAAGACATCCACGCTCAAAGTTCTTATGAT
TCATGGCTATACTGAAACTGGAGAGTTCTTTCGCTCAGAAGTACTTGACC
TGGAGAAGGCCCTTATCGAAGCCTTTCCAGCAGCGCCTGCCCCTGGTTAT
CATCCCGATTACCCGGATGGTGTAGAGCTCGTGTACCCAGATGGCACCTG
GAGACTCAAGCCAACCGATTGGGCCCGCTATATACCGGGGACCGATCCAG
GTTTTGGATGGTTCTACAAGGTTGACGACGACGATGAATTTCCAGGCTTG
CTCGATGGATTGCAAAAGCTTGGTGATATTATGCGCTCGCAAGGGCCCTT
TGCCGGGGTCATTGGATTTTCTCAAGGGGGTTTCTTGACCGGACTTATCA
CAAGCATGCTTGAGCCGGGCAGGAAGAGTGTCTTCGAGAAAGTCGAAGTC
GAAAGTGGAGGTATTCCATTCCCGAAGTCATTCGATGGAGTCGACCCTAT
TAAATTCTCGATCAGCTGCTGTGGTTTCGCTGCATTGAACCTTCGATACA
AAGCCTTTTATCTGCCAAAGATTTCCGGGCCGATGCTTCATGTAAATGGG
CAATTTGATGATATTGTGTACGATAAAAGAAGTCGCACTCTGATTGATGC
GACTACAGGTACTGAGGAAGAGAAAGTGCTCATTCATCCGGGTGGTCATT
CTGTGCCGACTAGCAAATTGTACACGGATGCGATGGTCATGTTCATCAAA
AGTAAACTCTCGAGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011267-T1.utr5p1 | KJC3_011267-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005645 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF03959 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:186008..186858 + |
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