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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:217265..219212+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011286-T1 ID=KJC3_011286-T1|Name=KJC3_011286-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1948bp|location=Sequence derived from alignment at ch8:217265..219212+ (Aspergillus niger KJC3)
ATGCCTACCCTGAGCCATCGGGGTCTTCAATTGATCCCAGTCCCTACGGA
TGATCCGGGTGATCCTCTTCGCTGGCCCAGCTGGCTCAAATTGTCTGTCA
TACTCTCGACGTCCTTGGTCAATTTTGTCTCCAACATGGGTGGTGCTGGA
TTGTCCGTTGCCGTCCCGGTCTTGATGCAGCAGCTCCAGCGTTCCCAAGC
AGAGGTAACCCAGCTACTCACGGTACGCAATCCATATAACCTGGAAACCC
ACGGGTATAAGCAGAGTCTGCTGACTTATTCTGGGTAGCTTAACTTTCTG
TTCCTGGGCATCGGCAATATCTTCTGGGTCCCGCTTGCGGTCAAGTTTGG
CAAACGTGCATCAATTATATCCTCGATGTTGCTTCAGGCAGGGGCCCTGG
TGTGGTGTGCGGTAGCTACGGGCTATGACAGCCTCTTGGGCGCAAGATGC
GTTCTTGGATTTGCTGCTGCTGCTGGCGAAGTAAGAAGCCGCTCCCATAA
AGATTCACCTAGTCTTATCACCTGGATACGCCGAATTGACGTTGGATGTT
CTATAGAGTATCGTACCCGAGATCGTTGCTGATATATTCTTCGTCCACGA
GCGTGCTACGATGATGGCAATGTGAGATTTTGGACCCTTTCATAGTACAC
CACCTGTTGAGACTTTTCCTGATTTGATATAGCTATGTTGTCTTGATCTC
TGGAGGCTCAGCTGTTGGCCCCTTAATTGGAGGTTTTATGGTAGAGTACG
CCTCGGGCACGTGGCGGTCATACATGTGGCTTTGCTTCGCGCTCGCCAGT
TTCAATATAGTGCTCTTGGTCTTCCTCTTCCCGGAATCGACCTTCAAGCG
ACCGGAACCTTCTCAGGCACAGGAGTTACAGCTCGTCGCAGAACACAAAG
AGACTACGAGTTCATTCATCGAGAATGCCTCAGCTGCAGCTCCAGAGGAC
TCCTATACCACCAACACGCCCCCCTTTAAGGGTGTCCTTCGGCCGTTCCA
TTACAATAAGGATGCCAGCTTTTTCAAGGCAGTGATCTCGCCCCTCAAGC
TGTTGGTTCATCCGTCGGTCTGTTGGGGCATTTTTACCTACGGCATATCT
CTAAGTCCGCAAATCATTATGATGTACGTGCTCCTATGAGAAACTCTGTA
GCGGAAAAAGACCAGCGCCCGTGCTAATAACAGACAAACTTATAATAGCT
TTAACTTCTCCGCTCTCCTAGAAGCGCCGCCATACTTCTTCCGCTCCGAG
TATGTCGGTCTCATGGAAATCGCCGCTATTGTGGGATTCCTACTAGCATG
CTACGGCGGTGGCTACCTATCCGATACCGTAAACAGAATTATTGCCCAAC
GCAGCAGCAGTAGCAGCATCCGCCCCGAACAACGCCTCATCTCTCTCATC
CCAGGAATGGCCATCGGGCCGGCAGGCTGTATCCTGCTCGCGTTTGCCTG
CGGCCACAAACTCCACTGGGCCGCCATCGCGGTTGGCTTCGGAATGGTCT
CGTTTGGGACCGCGTATACACCCAACATCGCTCTTACGTACATCGTGCAC
TTGCATCAACAAGATGCCGCGAACTGCCTTGTCTCAATTAGCTTGGTCAA
AAACCTGGTGGCATTCACGTTTCTGTATGTTGCTGTGGACTGGGTTGAGA
GGGAGGGTTACGTGCAGGTTTTTATGATTATGTTTATGTTGAATGTTTTG
GCTCTTCTCTGTGCGGTCCCGTTGTACTTTTTGGGACGGAGGAAGGACTT
GAACGTATATAATGGGATGGAGGGGCGTGCGTAAGTCAGATGTGGGAGAG
ATATACATCTTGCGGTTCTTTCAATTGCACCGGTCTTATGTGTAAAGTTG
CCGCACCATAGACCGTGTTATTGCTGATAGAATTACTCACAAACCCACAG
CTAAGCTTCTCGTAGGAGGCTAATCTGTTCATCCGAAGCATAAAAGCT back to topCoding sequence (CDS) from alignment at ch8:217265..219212+ >KJC3_011286-T1 ID=KJC3_011286-T1|Name=KJC3_011286-T1|organism=Aspergillus niger KJC3|type=CDS|length=7530bp|location=Sequence derived from alignment at ch8:217265..219212+ (Aspergillus niger KJC3)
ATGCCTACCCTGAGCCATCGGGGTCTTCAATTGATCCCAGTCCCTACGGA
TGATCCGGGTGATCCTCTTCGCTGGCCCAGCTGGCTCAAATTGTCTGTCA
TACTCTCGACGTCCTTGGTCAATTTTGTCTCCAACATGGGTGGTGCTGGA
TTGTCCGTTGCCGTCCCGGTCTTGATGCAGCAGCTCCAGCGTTCCCAAGC
AGAGGTAACCCAGCTACTCACGCTTAACTTTCTGTTCCTGGGCATCGGCA
ATATCTTCTGGGTCCCGCTTGCGGTCAAGTTTGGCAAACGTGCATCAATT
ATATCCTCGATGTTGCTTCAGGCAGGGGCCCTGGTGTGGTGTGCGGTAGC
TACGGGCTATGACAGCCTCTTGGGCGCAAGATGCGTTCTTGGATTTGCTG
CTGCTGCTGGCGAAAGTATCGTACCCGAGATCGTTGCTGATATATTCTTC
GTCCACGAGCGTGCTACGATGATGGCAATCTATGTTGTCTTGATCTCTGG
AGGCTCAGCTGTTGGCCCCTTAATTGGAGGTTTTATGGTAGAGTACGCCT
CGGGCACGTGGCGGTCATACATGTGGCTTTGCTTCGCGCTCGCCAGTTTC
AATATAGTGCTCTTGGTCTTCCTCTTCCCGGAATCGACCTTCAAGCGACC
GGAACCTTCTCAGGCACAGGAGTTACAGCTCGTCGCAGAACACAAAGAGA
CTACGAGTTCATTCATCGAGAATGCCTCAGCTGCAGCTCCAGAGGACTCC
TATACCACCAACACGCCCCCCTTTAAGGGTGTCCTTCGGCCGTTCCATTA
CAATAAGGATGCCAGCTTTTTCAAGGCAGTGATCTCGCCCCTCAAGCTGT
TGGTTCATCCGTCGGTCTGTTGGGGCATTTTTACCTACGGCATATCTCTA
AGTCCGCAAATCATTATGATCTTTAACTTCTCCGCTCTCCTAGAAGCGCC
GCCATACTTCTTCCGCTCCGAGTATGTCGGTCTCATGGAAATCGCCGCTA
TTGTGGGATTCCTACTAGCATGCTACGGCGGTGGCTACCTATCCGATACC
GTAAACAGAATTATTGCCCAACGCAGCAGCAGTAGCAGCATCCGCCCCGA
ACAACGCCTCATCTCTCTCATCCCAGGAATGGCCATCGGGCCGGCAGGCT
GTATCCTGCTCGCGTTTGCCTGCGGCCACAAACTCCACTGGGCCGCCATC
GCGGTTGGCTTCGGAATGGTCTCGTTTGGGACCGCGTATACACCCAACAT
CGCTCTTACGTACATCGTGCACTTGCATCAACAAGATGCCGCGAACTGCC
TTGTCTCAATTAGCTTGGTCAAAAACCTGGTGGCATTCACGTTTCTGTAT
GTTGCTGTGGACTGGGTTGAGAGGGAGGGTTACGTGCAGGTTTTTATGAT
TATGTTTATGTTGAATGTTTTGGCTCTTCTCTGTGCGGTCCCGTTGTACT
TTTTGGGACGGAGGAAGGACTTGAACGTATATAATGGGATGGAGGGGCGT
GCGTAAATGCCTACCCTGAGCCATCGGGGTCTTCAATTGATCCCAGTCCC
TACGGATGATCCGGGTGATCCTCTTCGCTGGCCCAGCTGGCTCAAATTGT
CTGTCATACTCTCGACGTCCTTGGTCAATTTTGTCTCCAACATGGGTGGT
GCTGGATTGTCCGTTGCCGTCCCGGTCTTGATGCAGCAGCTCCAGCGTTC
CCAAGCAGAGGTAACCCAGCTACTCACGCTTAACTTTCTGTTCCTGGGCA
TCGGCAATATCTTCTGGGTCCCGCTTGCGGTCAAGTTTGGCAAACGTGCA
TCAATTATATCCTCGATGTTGCTTCAGGCAGGGGCCCTGGTGTGGTGTGC
GGTAGCTACGGGCTATGACAGCCTCTTGGGCGCAAGATGCGTTCTTGGAT
TTGCTGCTGCTGCTGGCGAAAGTATCGTACCCGAGATCGTTGCTGATATA
TTCTTCGTCCACGAGCGTGCTACGATGATGGCAATCTATGTTGTCTTGAT
CTCTGGAGGCTCAGCTGTTGGCCCCTTAATTGGAGGTTTTATGGTAGAGT
ACGCCTCGGGCACGTGGCGGTCATACATGTGGCTTTGCTTCGCGCTCGCC
AGTTTCAATATAGTGCTCTTGGTCTTCCTCTTCCCGGAATCGACCTTCAA
GCGACCGGAACCTTCTCAGGCACAGGAGTTACAGCTCGTCGCAGAACACA
AAGAGACTACGAGTTCATTCATCGAGAATGCCTCAGCTGCAGCTCCAGAG
GACTCCTATACCACCAACACGCCCCCCTTTAAGGGTGTCCTTCGGCCGTT
CCATTACAATAAGGATGCCAGCTTTTTCAAGGCAGTGATCTCGCCCCTCA
AGCTGTTGGTTCATCCGTCGGTCTGTTGGGGCATTTTTACCTACGGCATA
TCTCTAAGTCCGCAAATCATTATGATCTTTAACTTCTCCGCTCTCCTAGA
AGCGCCGCCATACTTCTTCCGCTCCGAGTATGTCGGTCTCATGGAAATCG
CCGCTATTGTGGGATTCCTACTAGCATGCTACGGCGGTGGCTACCTATCC
GATACCGTAAACAGAATTATTGCCCAACGCAGCAGCAGTAGCAGCATCCG
CCCCGAACAACGCCTCATCTCTCTCATCCCAGGAATGGCCATCGGGCCGG
CAGGCTGTATCCTGCTCGCGTTTGCCTGCGGCCACAAACTCCACTGGGCC
GCCATCGCGGTTGGCTTCGGAATGGTCTCGTTTGGGACCGCGTATACACC
CAACATCGCTCTTACGTACATCGTGCACTTGCATCAACAAGATGCCGCGA
ACTGCCTTGTCTCAATTAGCTTGGTCAAAAACCTGGTGGCATTCACGTTT
CTGTATGTTGCTGTGGACTGGGTTGAGAGGGAGGGTTACGTGCAGGTTTT
TATGATTATGTTTATGTTGAATGTTTTGGCTCTTCTCTGTGCGGTCCCGT
TGTACTTTTTGGGACGGAGGAAGGACTTGAACGTATATAATGGGATGGAG
GGGCGTGCGTAAATGCCTACCCTGAGCCATCGGGGTCTTCAATTGATCCC
AGTCCCTACGGATGATCCGGGTGATCCTCTTCGCTGGCCCAGCTGGCTCA
AATTGTCTGTCATACTCTCGACGTCCTTGGTCAATTTTGTCTCCAACATG
GGTGGTGCTGGATTGTCCGTTGCCGTCCCGGTCTTGATGCAGCAGCTCCA
GCGTTCCCAAGCAGAGGTAACCCAGCTACTCACGCTTAACTTTCTGTTCC
TGGGCATCGGCAATATCTTCTGGGTCCCGCTTGCGGTCAAGTTTGGCAAA
CGTGCATCAATTATATCCTCGATGTTGCTTCAGGCAGGGGCCCTGGTGTG
GTGTGCGGTAGCTACGGGCTATGACAGCCTCTTGGGCGCAAGATGCGTTC
TTGGATTTGCTGCTGCTGCTGGCGAAAGTATCGTACCCGAGATCGTTGCT
GATATATTCTTCGTCCACGAGCGTGCTACGATGATGGCAATCTATGTTGT
CTTGATCTCTGGAGGCTCAGCTGTTGGCCCCTTAATTGGAGGTTTTATGG
TAGAGTACGCCTCGGGCACGTGGCGGTCATACATGTGGCTTTGCTTCGCG
CTCGCCAGTTTCAATATAGTGCTCTTGGTCTTCCTCTTCCCGGAATCGAC
CTTCAAGCGACCGGAACCTTCTCAGGCACAGGAGTTACAGCTCGTCGCAG
AACACAAAGAGACTACGAGTTCATTCATCGAGAATGCCTCAGCTGCAGCT
CCAGAGGACTCCTATACCACCAACACGCCCCCCTTTAAGGGTGTCCTTCG
GCCGTTCCATTACAATAAGGATGCCAGCTTTTTCAAGGCAGTGATCTCGC
CCCTCAAGCTGTTGGTTCATCCGTCGGTCTGTTGGGGCATTTTTACCTAC
GGCATATCTCTAAGTCCGCAAATCATTATGATCTTTAACTTCTCCGCTCT
CCTAGAAGCGCCGCCATACTTCTTCCGCTCCGAGTATGTCGGTCTCATGG
AAATCGCCGCTATTGTGGGATTCCTACTAGCATGCTACGGCGGTGGCTAC
CTATCCGATACCGTAAACAGAATTATTGCCCAACGCAGCAGCAGTAGCAG
CATCCGCCCCGAACAACGCCTCATCTCTCTCATCCCAGGAATGGCCATCG
GGCCGGCAGGCTGTATCCTGCTCGCGTTTGCCTGCGGCCACAAACTCCAC
TGGGCCGCCATCGCGGTTGGCTTCGGAATGGTCTCGTTTGGGACCGCGTA
TACACCCAACATCGCTCTTACGTACATCGTGCACTTGCATCAACAAGATG
CCGCGAACTGCCTTGTCTCAATTAGCTTGGTCAAAAACCTGGTGGCATTC
ACGTTTCTGTATGTTGCTGTGGACTGGGTTGAGAGGGAGGGTTACGTGCA
GGTTTTTATGATTATGTTTATGTTGAATGTTTTGGCTCTTCTCTGTGCGG
TCCCGTTGTACTTTTTGGGACGGAGGAAGGACTTGAACGTATATAATGGG
ATGGAGGGGCGTGCGTAAATGCCTACCCTGAGCCATCGGGGTCTTCAATT
GATCCCAGTCCCTACGGATGATCCGGGTGATCCTCTTCGCTGGCCCAGCT
GGCTCAAATTGTCTGTCATACTCTCGACGTCCTTGGTCAATTTTGTCTCC
AACATGGGTGGTGCTGGATTGTCCGTTGCCGTCCCGGTCTTGATGCAGCA
GCTCCAGCGTTCCCAAGCAGAGGTAACCCAGCTACTCACGCTTAACTTTC
TGTTCCTGGGCATCGGCAATATCTTCTGGGTCCCGCTTGCGGTCAAGTTT
GGCAAACGTGCATCAATTATATCCTCGATGTTGCTTCAGGCAGGGGCCCT
GGTGTGGTGTGCGGTAGCTACGGGCTATGACAGCCTCTTGGGCGCAAGAT
GCGTTCTTGGATTTGCTGCTGCTGCTGGCGAAAGTATCGTACCCGAGATC
GTTGCTGATATATTCTTCGTCCACGAGCGTGCTACGATGATGGCAATCTA
TGTTGTCTTGATCTCTGGAGGCTCAGCTGTTGGCCCCTTAATTGGAGGTT
TTATGGTAGAGTACGCCTCGGGCACGTGGCGGTCATACATGTGGCTTTGC
TTCGCGCTCGCCAGTTTCAATATAGTGCTCTTGGTCTTCCTCTTCCCGGA
ATCGACCTTCAAGCGACCGGAACCTTCTCAGGCACAGGAGTTACAGCTCG
TCGCAGAACACAAAGAGACTACGAGTTCATTCATCGAGAATGCCTCAGCT
GCAGCTCCAGAGGACTCCTATACCACCAACACGCCCCCCTTTAAGGGTGT
CCTTCGGCCGTTCCATTACAATAAGGATGCCAGCTTTTTCAAGGCAGTGA
TCTCGCCCCTCAAGCTGTTGGTTCATCCGTCGGTCTGTTGGGGCATTTTT
ACCTACGGCATATCTCTAAGTCCGCAAATCATTATGATCTTTAACTTCTC
CGCTCTCCTAGAAGCGCCGCCATACTTCTTCCGCTCCGAGTATGTCGGTC
TCATGGAAATCGCCGCTATTGTGGGATTCCTACTAGCATGCTACGGCGGT
GGCTACCTATCCGATACCGTAAACAGAATTATTGCCCAACGCAGCAGCAG
TAGCAGCATCCGCCCCGAACAACGCCTCATCTCTCTCATCCCAGGAATGG
CCATCGGGCCGGCAGGCTGTATCCTGCTCGCGTTTGCCTGCGGCCACAAA
CTCCACTGGGCCGCCATCGCGGTTGGCTTCGGAATGGTCTCGTTTGGGAC
CGCGTATACACCCAACATCGCTCTTACGTACATCGTGCACTTGCATCAAC
AAGATGCCGCGAACTGCCTTGTCTCAATTAGCTTGGTCAAAAACCTGGTG
GCATTCACGTTTCTGTATGTTGCTGTGGACTGGGTTGAGAGGGAGGGTTA
CGTGCAGGTTTTTATGATTATGTTTATGTTGAATGTTTTGGCTCTTCTCT
GTGCGGTCCCGTTGTACTTTTTGGGACGGAGGAAGGACTTGAACGTATAT
AATGGGATGGAGGGGCGTGCGTAAATGCCTACCCTGAGCCATCGGGGTCT
TCAATTGATCCCAGTCCCTACGGATGATCCGGGTGATCCTCTTCGCTGGC
CCAGCTGGCTCAAATTGTCTGTCATACTCTCGACGTCCTTGGTCAATTTT
GTCTCCAACATGGGTGGTGCTGGATTGTCCGTTGCCGTCCCGGTCTTGAT
GCAGCAGCTCCAGCGTTCCCAAGCAGAGGTAACCCAGCTACTCACGCTTA
ACTTTCTGTTCCTGGGCATCGGCAATATCTTCTGGGTCCCGCTTGCGGTC
AAGTTTGGCAAACGTGCATCAATTATATCCTCGATGTTGCTTCAGGCAGG
GGCCCTGGTGTGGTGTGCGGTAGCTACGGGCTATGACAGCCTCTTGGGCG
CAAGATGCGTTCTTGGATTTGCTGCTGCTGCTGGCGAAAGTATCGTACCC
GAGATCGTTGCTGATATATTCTTCGTCCACGAGCGTGCTACGATGATGGC
AATCTATGTTGTCTTGATCTCTGGAGGCTCAGCTGTTGGCCCCTTAATTG
GAGGTTTTATGGTAGAGTACGCCTCGGGCACGTGGCGGTCATACATGTGG
CTTTGCTTCGCGCTCGCCAGTTTCAATATAGTGCTCTTGGTCTTCCTCTT
CCCGGAATCGACCTTCAAGCGACCGGAACCTTCTCAGGCACAGGAGTTAC
AGCTCGTCGCAGAACACAAAGAGACTACGAGTTCATTCATCGAGAATGCC
TCAGCTGCAGCTCCAGAGGACTCCTATACCACCAACACGCCCCCCTTTAA
GGGTGTCCTTCGGCCGTTCCATTACAATAAGGATGCCAGCTTTTTCAAGG
CAGTGATCTCGCCCCTCAAGCTGTTGGTTCATCCGTCGGTCTGTTGGGGC
ATTTTTACCTACGGCATATCTCTAAGTCCGCAAATCATTATGATCTTTAA
CTTCTCCGCTCTCCTAGAAGCGCCGCCATACTTCTTCCGCTCCGAGTATG
TCGGTCTCATGGAAATCGCCGCTATTGTGGGATTCCTACTAGCATGCTAC
GGCGGTGGCTACCTATCCGATACCGTAAACAGAATTATTGCCCAACGCAG
CAGCAGTAGCAGCATCCGCCCCGAACAACGCCTCATCTCTCTCATCCCAG
GAATGGCCATCGGGCCGGCAGGCTGTATCCTGCTCGCGTTTGCCTGCGGC
CACAAACTCCACTGGGCCGCCATCGCGGTTGGCTTCGGAATGGTCTCGTT
TGGGACCGCGTATACACCCAACATCGCTCTTACGTACATCGTGCACTTGC
ATCAACAAGATGCCGCGAACTGCCTTGTCTCAATTAGCTTGGTCAAAAAC
CTGGTGGCATTCACGTTTCTGTATGTTGCTGTGGACTGGGTTGAGAGGGA
GGGTTACGTGCAGGTTTTTATGATTATGTTTATGTTGAATGTTTTGGCTC
TTCTCTGTGCGGTCCCGTTGTACTTTTTGGGACGGAGGAAGGACTTGAAC
GTATATAATGGGATGGAGGGGCGTGCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011286-T1.utr3p1 | KJC3_011286-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:217265..219212 + |
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