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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:247900..249638+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011301-T1 ID=KJC3_011301-T1|Name=KJC3_011301-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1739bp|location=Sequence derived from alignment at ch8:247900..249638+ (Aspergillus niger KJC3)
CTTGGCCTGACCGAAGTTAATTGCTGAAGGATTCTGAATCCGAATCATGT
TCCAGCTCTGAGGACCAAATTTGCCCCTTGTTGTAGGGCTTCAGCATGAT
CCTGCGAAGCCCAGGATCGAAAAATCCCTTCAACCAGCGCACAGCACGAC
TTGCATAATCACTACGCAAATATCCCTTCTCCCTCATGTCTCTCCCCTCT
TTCTCCTTGACCTTCTACATTTACTGCCAGTATGGGCTGGGTGCACCATG
CCTCGCCTGAAGTGGAAGCGGAGTCGCAATATCGCCTCATTCTAGGGGTG
TGCCTGGGCTTGACCCTGTTGATGATTATCACAGTCTGCCTGCGTTTAGC
AATCCGATTCAACGCCCGCCGATTGGAAGCGTCCGATTTTGTGATGCTGG
TGACTATGGTGGGTTACCTTCGGTGGATAGACGATCCGACCGCTAATCGG
TGCCAGATCTTCAGCATCATATACAGCGCATTGTGCGTCGCTCGTGAGTC
GACCAAGCCTTGAGTCCAGTCTAAGCGCTCACTTTCAACAGAGAGCAGGT
ACGGCCTCGGATTACCCTTGTCGCTGCGCCCCAAGGCAGACCTTCCGGAT
TACACAAAGGTATGCGCTGTGCCTGAATTTCAGTCAAGACGAAGTATTTA
TAAAAACACCAACAGCTCAATTATGCCGGTCGCCCATTCTACCAACTTGG
AATCGCAGGATTCAAAGCTTCCCTATGCCTCAATTATTTGCGATTGATTT
CCGGAACATCCAAGAATTTCTACCGAATCCTTATATGGGCCGTGATAGCT
GTCTCGACACTTGGCCATCTTGCGGGAACATTAGTTCTGATATTCGACTG
CCAGCCGGTGAGAGAGTGAAATATTTTCCAGTCGCAGGGCAAGCTGGCTG
ATATGACGATCGAAAGGTTGAGCGCGCCTGGAACCCCAACATCTCAGGGT
CGTGTCTTCCAGCAGGGCCAACATTCTATGGATTAGCCATCTTCACCATT
ATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTGCTTCAACT
GAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTTCCTGCTGG
GGCTGTTCACCACGATCTGCTCTATCCTTCGCCTCACGCAAATCCATCGG
GTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGGGGCACAAT
TGAGTTCAATGTCGGGGTAGGTTTCCACGAGCACGCGAAATAGGATTATG
CACCGAGTCACTGACTAATTGTATTAGAACATTGTAACTTGTGTCCCCTT
CCTCGCTCCTTTGCTGAAAGGTGCAGTGCGCGATTTCCGATCGTACAGTG
GCCGGAAAGGGTACGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAAA
GACCCGCGCTCGCAGTTACGGTCGACAACTTCGGCGGCGCCGCAACCCAA
ACGCACGCCCAGCGAAGAGCTTATCCTCGAGAGTGGGGGCGTCGACGAGG
GAGGCATTCATATGACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCA
ACGACAGAGGTCAGAGAGTGATGCCAGTACTCTTGCCAACGACTGATGGC
GCCATTCCTTAGAACTAATCTCTTAGACTTTCGTTATGTATATTAATCAC
TCACTGGGTCTTCCTTTTTCTTCTCGTCCTATTGTGAGCCACTTTCCGGC
GATTTCTGAAATAGTGCAATGCAGGAATCTTATTAGGTG back to topCoding sequence (CDS) from alignment at ch8:247900..249638+ >KJC3_011301-T1 ID=KJC3_011301-T1|Name=KJC3_011301-T1|organism=Aspergillus niger KJC3|type=CDS|length=6408bp|location=Sequence derived from alignment at ch8:247900..249638+ (Aspergillus niger KJC3)
ATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAATA
TCGCCTCATTCTAGGGGTGTGCCTGGGCTTGACCCTGTTGATGATTATCA
CAGTCTGCCTGCGTTTAGCAATCCGATTCAACGCCCGCCGATTGGAAGCG
TCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACAGCGC
ATTGTGCGTCGCTCAGAGCAGGTACGGCCTCGGATTACCCTTGTCGCTGC
GCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGGTCGC
CCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCAA
TTATTTGCGATTGATTTCCGGAACATCCAAGAATTTCTACCGAATCCTTA
TATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACATTA
GTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAACAT
CTCAGGGTCGTGTCTTCCAGCAGGGCCAACATTCTATGGATTAGCCATCT
TCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTG
CTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTT
CCTGCTGGGGCTGTTCACCACGATCTGCTCTATCCTTCGCCTCACGCAAA
TCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGG
GGCACAATTGAGTTCAATGTCGGGAACATTGTAACTTGTGTCCCCTTCCT
CGCTCCTTTGCTGAAAGGTGCAGTGCGCGATTTCCGATCGTACAGTGGCC
GGAAAGGGTACGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAAAGAC
CCGCGCTCGCAGTTACGGTCGACAACTTCGGCGGCGCCGCAACCCAAACG
CACGCCCAGCGAAGAGCTTATCCTCGAGAGTGGGGGCGTCGACGAGGGAG
GCATTCATATGACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCAACG
ACAGAGGTCAGAGAGTGAATGGGCTGGGTGCACCATGCCTCGCCTGAAGT
GGAAGCGGAGTCGCAATATCGCCTCATTCTAGGGGTGTGCCTGGGCTTGA
CCCTGTTGATGATTATCACAGTCTGCCTGCGTTTAGCAATCCGATTCAAC
GCCCGCCGATTGGAAGCGTCCGATTTTGTGATGCTGGTGACTATGATCTT
CAGCATCATATACAGCGCATTGTGCGTCGCTCAGAGCAGGTACGGCCTCG
GATTACCCTTGTCGCTGCGCCCCAAGGCAGACCTTCCGGATTACACAAAG
CTCAATTATGCCGGTCGCCCATTCTACCAACTTGGAATCGCAGGATTCAA
AGCTTCCCTATGCCTCAATTATTTGCGATTGATTTCCGGAACATCCAAGA
ATTTCTACCGAATCCTTATATGGGCCGTGATAGCTGTCTCGACACTTGGC
CATCTTGCGGGAACATTAGTTCTGATATTCGACTGCCAGCCGGTTGAGCG
CGCCTGGAACCCCAACATCTCAGGGTCGTGTCTTCCAGCAGGGCCAACAT
TCTATGGATTAGCCATCTTCACCATTATCTGCGACATCACCATCATCATC
CTTCCCATTCCGCTGTTGCTTCAACTGAATATCAAGACCGCACAGAAAGC
GGGAGTAGTTTGTCTGTTCCTGCTGGGGCTGTTCACCACGATCTGCTCTA
TCCTTCGCCTCACGCAAATCCATCGGGTGGCATATGGCGATGGAAATTCG
ACCATGTTGGTGCTGTGGGGCACAATTGAGTTCAATGTCGGGAACATTGT
AACTTGTGTCCCCTTCCTCGCTCCTTTGCTGAAAGGTGCAGTGCGCGATT
TCCGATCGTACAGTGGCCGGAAAGGGTACGATAGCCGGAGCTATGCTTTG
CAGACCTGGTCCAAAGACCCGCGCTCGCAGTTACGGTCGACAACTTCGGC
GGCGCCGCAACCCAAACGCACGCCCAGCGAAGAGCTTATCCTCGAGAGTG
GGGGCGTCGACGAGGGAGGCATTCATATGACGGTGGAGCTGCGCGTGTCG
CTAGAGAAGAGGCCAACGACAGAGGTCAGAGAGTGAATGGGCTGGGTGCA
CCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAATATCGCCTCATTCTAG
GGGTGTGCCTGGGCTTGACCCTGTTGATGATTATCACAGTCTGCCTGCGT
TTAGCAATCCGATTCAACGCCCGCCGATTGGAAGCGTCCGATTTTGTGAT
GCTGGTGACTATGATCTTCAGCATCATATACAGCGCATTGTGCGTCGCTC
AGAGCAGGTACGGCCTCGGATTACCCTTGTCGCTGCGCCCCAAGGCAGAC
CTTCCGGATTACACAAAGCTCAATTATGCCGGTCGCCCATTCTACCAACT
TGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCAATTATTTGCGATTGA
TTTCCGGAACATCCAAGAATTTCTACCGAATCCTTATATGGGCCGTGATA
GCTGTCTCGACACTTGGCCATCTTGCGGGAACATTAGTTCTGATATTCGA
CTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAACATCTCAGGGTCGTGTC
TTCCAGCAGGGCCAACATTCTATGGATTAGCCATCTTCACCATTATCTGC
GACATCACCATCATCATCCTTCCCATTCCGCTGTTGCTTCAACTGAATAT
CAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTTCCTGCTGGGGCTGT
TCACCACGATCTGCTCTATCCTTCGCCTCACGCAAATCCATCGGGTGGCA
TATGGCGATGGAAATTCGACCATGTTGGTGCTGTGGGGCACAATTGAGTT
CAATGTCGGGAACATTGTAACTTGTGTCCCCTTCCTCGCTCCTTTGCTGA
AAGGTGCAGTGCGCGATTTCCGATCGTACAGTGGCCGGAAAGGGTACGAT
AGCCGGAGCTATGCTTTGCAGACCTGGTCCAAAGACCCGCGCTCGCAGTT
ACGGTCGACAACTTCGGCGGCGCCGCAACCCAAACGCACGCCCAGCGAAG
AGCTTATCCTCGAGAGTGGGGGCGTCGACGAGGGAGGCATTCATATGACG
GTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCAACGACAGAGGTCAGAGA
GTGAATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGC
AATATCGCCTCATTCTAGGGGTGTGCCTGGGCTTGACCCTGTTGATGATT
ATCACAGTCTGCCTGCGTTTAGCAATCCGATTCAACGCCCGCCGATTGGA
AGCGTCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACA
GCGCATTGTGCGTCGCTCAGAGCAGGTACGGCCTCGGATTACCCTTGTCG
CTGCGCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGG
TCGCCCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCC
TCAATTATTTGCGATTGATTTCCGGAACATCCAAGAATTTCTACCGAATC
CTTATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAAC
ATTAGTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCA
ACATCTCAGGGTCGTGTCTTCCAGCAGGGCCAACATTCTATGGATTAGCC
ATCTTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCT
GTTGCTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTC
TGTTCCTGCTGGGGCTGTTCACCACGATCTGCTCTATCCTTCGCCTCACG
CAAATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCT
GTGGGGCACAATTGAGTTCAATGTCGGGAACATTGTAACTTGTGTCCCCT
TCCTCGCTCCTTTGCTGAAAGGTGCAGTGCGCGATTTCCGATCGTACAGT
GGCCGGAAAGGGTACGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAA
AGACCCGCGCTCGCAGTTACGGTCGACAACTTCGGCGGCGCCGCAACCCA
AACGCACGCCCAGCGAAGAGCTTATCCTCGAGAGTGGGGGCGTCGACGAG
GGAGGCATTCATATGACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCC
AACGACAGAGGTCAGAGAGTGAATGGGCTGGGTGCACCATGCCTCGCCTG
AAGTGGAAGCGGAGTCGCAATATCGCCTCATTCTAGGGGTGTGCCTGGGC
TTGACCCTGTTGATGATTATCACAGTCTGCCTGCGTTTAGCAATCCGATT
CAACGCCCGCCGATTGGAAGCGTCCGATTTTGTGATGCTGGTGACTATGA
TCTTCAGCATCATATACAGCGCATTGTGCGTCGCTCAGAGCAGGTACGGC
CTCGGATTACCCTTGTCGCTGCGCCCCAAGGCAGACCTTCCGGATTACAC
AAAGCTCAATTATGCCGGTCGCCCATTCTACCAACTTGGAATCGCAGGAT
TCAAAGCTTCCCTATGCCTCAATTATTTGCGATTGATTTCCGGAACATCC
AAGAATTTCTACCGAATCCTTATATGGGCCGTGATAGCTGTCTCGACACT
TGGCCATCTTGCGGGAACATTAGTTCTGATATTCGACTGCCAGCCGGTTG
AGCGCGCCTGGAACCCCAACATCTCAGGGTCGTGTCTTCCAGCAGGGCCA
ACATTCTATGGATTAGCCATCTTCACCATTATCTGCGACATCACCATCAT
CATCCTTCCCATTCCGCTGTTGCTTCAACTGAATATCAAGACCGCACAGA
AAGCGGGAGTAGTTTGTCTGTTCCTGCTGGGGCTGTTCACCACGATCTGC
TCTATCCTTCGCCTCACGCAAATCCATCGGGTGGCATATGGCGATGGAAA
TTCGACCATGTTGGTGCTGTGGGGCACAATTGAGTTCAATGTCGGGAACA
TTGTAACTTGTGTCCCCTTCCTCGCTCCTTTGCTGAAAGGTGCAGTGCGC
GATTTCCGATCGTACAGTGGCCGGAAAGGGTACGATAGCCGGAGCTATGC
TTTGCAGACCTGGTCCAAAGACCCGCGCTCGCAGTTACGGTCGACAACTT
CGGCGGCGCCGCAACCCAAACGCACGCCCAGCGAAGAGCTTATCCTCGAG
AGTGGGGGCGTCGACGAGGGAGGCATTCATATGACGGTGGAGCTGCGCGT
GTCGCTAGAGAAGAGGCCAACGACAGAGGTCAGAGAGTGAATGGGCTGGG
TGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAATATCGCCTCATT
CTAGGGGTGTGCCTGGGCTTGACCCTGTTGATGATTATCACAGTCTGCCT
GCGTTTAGCAATCCGATTCAACGCCCGCCGATTGGAAGCGTCCGATTTTG
TGATGCTGGTGACTATGATCTTCAGCATCATATACAGCGCATTGTGCGTC
GCTCAGAGCAGGTACGGCCTCGGATTACCCTTGTCGCTGCGCCCCAAGGC
AGACCTTCCGGATTACACAAAGCTCAATTATGCCGGTCGCCCATTCTACC
AACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCAATTATTTGCGA
TTGATTTCCGGAACATCCAAGAATTTCTACCGAATCCTTATATGGGCCGT
GATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACATTAGTTCTGATAT
TCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAACATCTCAGGGTCG
TGTCTTCCAGCAGGGCCAACATTCTATGGATTAGCCATCTTCACCATTAT
CTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTGCTTCAACTGA
ATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTTCCTGCTGGGG
CTGTTCACCACGATCTGCTCTATCCTTCGCCTCACGCAAATCCATCGGGT
GGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGGGGCACAATTG
AGTTCAATGTCGGGAACATTGTAACTTGTGTCCCCTTCCTCGCTCCTTTG
CTGAAAGGTGCAGTGCGCGATTTCCGATCGTACAGTGGCCGGAAAGGGTA
CGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAAAGACCCGCGCTCGC
AGTTACGGTCGACAACTTCGGCGGCGCCGCAACCCAAACGCACGCCCAGC
GAAGAGCTTATCCTCGAGAGTGGGGGCGTCGACGAGGGAGGCATTCATAT
GACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCAACGACAGAGGTCA
GAGAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011301-T1.utr5p1 | KJC3_011301-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011301-T1.utr3p1 | KJC3_011301-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:247900..249638 + |
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