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KJC3_011319-T1, KJC3_011319-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011319-T1
Unique NameKJC3_011319-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:291230..292832-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011319-T1 ID=KJC3_011319-T1|Name=KJC3_011319-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1603bp|location=Sequence derived from alignment at ch8:291230..292832- (Aspergillus niger KJC3)
TCCAATCCCCACAATCATGCCGGCCCTCTCGGTTCTCCCCGCTGACATTC
TCTTGCACGTCATCTCCTTTCTCGATCACAGTGGAGATGTCTACTCCTTT
TCTCTCCTCAGTCTATCGCTGTTCACGCTCATCCACAGCAATGACCTCGT
AAATAAAACCAGATATCGCTGTATCCGCATCAACTGCACCCCGGACCTGA
AAAACGCCTATGCCATCCTCCTTGACATCCTGCATGACTGTAACCTCGCC
AGTTATGTGCGTCACATCGAGATGGACCTTCCCGTTCGCTCTCCGCTGAA
CTACAAGCCGCGGGAATATGATCGCCCTGTTGACGCAGGCGACATGCAGC
GTCTCCGTGCGGCCGCCACCAGAGCCGGCTTTATCGGTGCTGAACAGGAG
AGACTACTCAACATGGCCATGCAAGAGACAGACTACACTAAGGACTGGCA
GTATCTCACATACTACAAGTGCGTTCTCTATTATCGTTATTGAAATCACC
ACCATATCTGACCCAGCCAGCACCCAAGAGGATGCTTACCACGGCAAATC
CACCTTCATCGGCCAAGCCTTGACGGTCCTCCTCATAGCATCCTCCCCCA
ACTTGACTTCTCTTGCTATCTCCCCTCCCTTTTGGGAGTACACATCTTCC
CGATTCAATGACCCTTCCGATAACCACCATTTCGCAGCCAAGATCGAGAA
GTACCCACTAGCCAAGTTCCTCAAACATGCCACCTCGAGTCATCTCATCG
AAAAGGGCGAAAGAAAGATCCCCTACTTGGCTAATGTTAAGCACTTCCAG
ATTCTAACAACAGAAGCCTCCAGCTTCCATATTGCGCGGTCCCGCGCTTG
CACTCCCCAGGACCTCTGTCTGTGTATTGAGCTGGTGCGTACCCTTCCCA
GTATCGAATCGCTGCGGATGCAGGCTATTCAGGGGTTTGGGAATGCCTCT
AGTGCTGCGCTGGACGGATTGCTTCCGCCTTTCTCAGCAAATATTTCGCG
ATTGGATCTGAGGGGGTGCGATTTCAAGTCGGATCTGTTGTGCAAGGTTA
TCTGTTCGATGAAATGCTTGAAAGAGTTGAGGTACTCAGTTGTACAGGGG
GGCTGCTATGCGGGCTTTGCAGAGTTCTTTGATCGGTACAGTTTGATAGA
GGCTATCCTGAGACATAGGGCCACGTTGGAAGTGCTCGATTTGGAATTTG
AGGATCAACTGTCTCAATTTGTTGCTGTGAAGCGTGAAAGCGGGGTGCAG
GATGATGCTGAGAATAAAAGTGTGTTGAAGGAGTTCATGTCGCTGAGGAG
CTTGAGTCTGGGAGTAAGTTGTCTGTGGTATATTGCTACTGGGATGGGTG
AGTTGAGAGATATCGTCCTGGTGGATCATTTGCCGTTGCAATTGGAGTAC
CTCCGCATCAGAGGATACGAGAAGGGACATACGAAAGCACTGGACAATAT
GTTAACTGGGATGGAGAGCGCGAGGGACAAACACCCTGCTCTGTGCACAG
TCCAAGGTGTCAACGAGTATATCCCTGTAGGAAAGTGATTCTGTGACCAG
CATAGTTACCAAATAGAATGACAATATGAACATGTACATAATGAAACCCT
CAT
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Coding sequence (CDS) from alignment at ch8:291230..292832-

>KJC3_011319-T1 ID=KJC3_011319-T1|Name=KJC3_011319-T1|organism=Aspergillus niger KJC3|type=CDS|length=2940bp|location=Sequence derived from alignment at ch8:291230..292832- (Aspergillus niger KJC3)
CACCCAAGAGGATGCTTACCACGGCAAATCCACCTTCATCGGCCAAGCCT
TGACGGTCCTCCTCATAGCATCCTCCCCCAACTTGACTTCTCTTGCTATC
TCCCCTCCCTTTTGGGAGTACACATCTTCCCGATTCAATGACCCTTCCGA
TAACCACCATTTCGCAGCCAAGATCGAGAAGTACCCACTAGCCAAGTTCC
TCAAACATGCCACCTCGAGTCATCTCATCGAAAAGGGCGAAAGAAAGATC
CCCTACTTGGCTAATGTTAAGCACTTCCAGATTCTAACAACAGAAGCCTC
CAGCTTCCATATTGCGCGGTCCCGCGCTTGCACTCCCCAGGACCTCTGTC
TGTGTATTGAGCTGGTGCGTACCCTTCCCAGTATCGAATCGCTGCGGATG
CAGGCTATTCAGGGGTTTGGGAATGCCTCTAGTGCTGCGCTGGACGGATT
GCTTCCGCCTTTCTCAGCAAATATTTCGCGATTGGATCTGAGGGGGTGCG
ATTTCAAGTCGGATCTGTTGTGCAAGGTTATCTGTTCGATGAAATGCTTG
AAAGAGTTGAGGTACTCAGTTGTACAGGGGGGCTGCTATGCGGGCTTTGC
AGAGTTCTTTGATCGGTACAGTTTGATAGAGGCTATCCTGAGACATAGGG
CCACGTTGGAAGTGCTCGATTTGGAATTTGAGGATCAACTGTCTCAATTT
GTTGCTGTGAAGCGTGAAAGCGGGGTGCAGGATGATGCTGAGAATAAAAG
TGTGTTGAAGGAGTTCATGTCGCTGAGGAGCTTGAGTCTGGGAGTAAGTT
GTCTGTGGTATATTGCTACTGGGATGGGTGAGTTGAGAGATATCGTCCTG
GTGGATCATTTGCCGTTGCAATTGGAGTACCTCCGCATCAGAGGATACGA
GAAGGGACATACGAAAGCACTGGACAATATGTTAACTGGGATGGAGAGCG
CGAGGGACAAACACCCTGCTCTGTGCACAGTCCAAGGTGTCAACGAGTAT
ATCCCTGTAGGAAAGTGAATGCCGGCCCTCTCGGTTCTCCCCGCTGACAT
TCTCTTGCACGTCATCTCCTTTCTCGATCACAGTGGAGATGTCTACTCCT
TTTCTCTCCTCAGTCTATCGCTGTTCACGCTCATCCACAGCAATGACCTC
GTAAATAAAACCAGATATCGCTGTATCCGCATCAACTGCACCCCGGACCT
GAAAAACGCCTATGCCATCCTCCTTGACATCCTGCATGACTGTAACCTCG
CCAGTTATGTGCGTCACATCGAGATGGACCTTCCCGTTCGCTCTCCGCTG
AACTACAAGCCGCGGGAATATGATCGCCCTGTTGACGCAGGCGACATGCA
GCGTCTCCGTGCGGCCGCCACCAGAGCCGGCTTTATCGGTGCTGAACAGG
AGAGACTACTCAACATGGCCATGCAAGAGACAGACTACACTAAGGACTGG
CAGTATCTCACATACTACAACACCCAAGAGGATGCTTACCACGGCAAATC
CACCTTCATCGGCCAAGCCTTGACGGTCCTCCTCATAGCATCCTCCCCCA
ACTTGACTTCTCTTGCTATCTCCCCTCCCTTTTGGGAGTACACATCTTCC
CGATTCAATGACCCTTCCGATAACCACCATTTCGCAGCCAAGATCGAGAA
GTACCCACTAGCCAAGTTCCTCAAACATGCCACCTCGAGTCATCTCATCG
AAAAGGGCGAAAGAAAGATCCCCTACTTGGCTAATGTTAAGCACTTCCAG
ATTCTAACAACAGAAGCCTCCAGCTTCCATATTGCGCGGTCCCGCGCTTG
CACTCCCCAGGACCTCTGTCTGTGTATTGAGCTGGTGCGTACCCTTCCCA
GTATCGAATCGCTGCGGATGCAGGCTATTCAGGGGTTTGGGAATGCCTCT
AGTGCTGCGCTGGACGGATTGCTTCCGCCTTTCTCAGCAAATATTTCGCG
ATTGGATCTGAGGGGGTGCGATTTCAAGTCGGATCTGTTGTGCAAGGTTA
TCTGTTCGATGAAATGCTTGAAAGAGTTGAGGTACTCAGTTGTACAGGGG
GGCTGCTATGCGGGCTTTGCAGAGTTCTTTGATCGGTACAGTTTGATAGA
GGCTATCCTGAGACATAGGGCCACGTTGGAAGTGCTCGATTTGGAATTTG
AGGATCAACTGTCTCAATTTGTTGCTGTGAAGCGTGAAAGCGGGGTGCAG
GATGATGCTGAGAATAAAAGTGTGTTGAAGGAGTTCATGTCGCTGAGGAG
CTTGAGTCTGGGAGTAAGTTGTCTGTGGTATATTGCTACTGGGATGGGTG
AGTTGAGAGATATCGTCCTGGTGGATCATTTGCCGTTGCAATTGGAGTAC
CTCCGCATCAGAGGATACGAGAAGGGACATACGAAAGCACTGGACAATAT
GTTAACTGGGATGGAGAGCGCGAGGGACAAACACCCTGCTCTGTGCACAG
TCCAAGGTGTCAACGAGTATATCCCTGTAGGAAAGTGAATGCCGGCCCTC
TCGGTTCTCCCCGCTGACATTCTCTTGCACGTCATCTCCTTTCTCGATCA
CAGTGGAGATGTCTACTCCTTTTCTCTCCTCAGTCTATCGCTGTTCACGC
TCATCCACAGCAATGACCTCGTAAATAAAACCAGATATCGCTGTATCCGC
ATCAACTGCACCCCGGACCTGAAAAACGCCTATGCCATCCTCCTTGACAT
CCTGCATGACTGTAACCTCGCCAGTTATGTGCGTCACATCGAGATGGACC
TTCCCGTTCGCTCTCCGCTGAACTACAAGCCGCGGGAATATGATCGCCCT
GTTGACGCAGGCGACATGCAGCGTCTCCGTGCGGCCGCCACCAGAGCCGG
CTTTATCGGTGCTGAACAGGAGAGACTACTCAACATGGCCATGCAAGAGA
CAGACTACACTAAGGACTGGCAGTATCTCACATACTACAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011319KJC3_011319Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011319-T1KJC3_011319-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011319-T1.cdsKJC3_011319-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011319-T1.utr3p1KJC3_011319-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011319-T1.exon2KJC3_011319-T1.exon2Aspergillus niger KJC3exon
KJC3_011319-T1.exon1KJC3_011319-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011319-T1.utr5p1KJC3_011319-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR032675
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:291230..292832 -
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