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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:306229..307649+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011324-T1 ID=KJC3_011324-T1|Name=KJC3_011324-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1421bp|location=Sequence derived from alignment at ch8:306229..307649+ (Aspergillus niger KJC3)
ACCAAAAGTTGCTAGCACCCCAAAGCCACAACCGCATTACTATGCAACCG
TCATAATGCACCATACTATGCATCCAGATCCACCGCCCCGGTCAGGGACT
GCATTTACCCCAGACCAGACCAGACCCACCGTTGCATCCCAACTTGACTC
ACCGATATAAAAAGCACACTTCTCACCGGCACACAACCATCACCCTCCAA
GCAACCACAACCAAAAGTAATTACTACTATGCTCAACGTCATCATCGTCG
GCGCCGGCCTCATCGGCCCCCGCCACGCACAATCTGTTATCACCAACCCC
TCCACCAACCTTCTTGCCTTGGTCGACCCCTCCCCAAGTGCGTCATCCGT
GGCTAAAACCCTCAACACGCTCTACTTCCCCTCATTATCAGCCCTACTGT
CTTCTGTACCAAACATCCCACACCCAGACGCCGCCATAATCTGCACCCCC
AACCACACGCACGTTCCCGTGGCTCTCGAACTCATCAGCCACAACATCCA
CATCTTACTCGAGAAACCCATTAGCGATACCATCACCACTGCGCTTCCCT
TGCTCCAAGCGCAGCAAAAGTATCCAGATGTGAAGATCCTCATCGGCCAC
CATCGGAGATTCAACCCATACATCACCAAAACCAAGGAAATCCTCGAGTC
CGGGTCACTGGGTCCAATTATTGCTCTATCCGGACTATGGACTCTATACA
AGCCAGCATCATACTTCACCGGTGCTACCGAGTGGAGAAGGGATAAGGCT
AAAGGTGGCGTATTGAGTATTAACCTCATTCATGATGTGGATCTACTCCA
CTACCTATTCGGTCCTATTACGCGCGTTTACGCAGAGAAAACCCTCCCTC
AGCGCGGGGGTCCAGATGGGAATGAGAATCACACCGCGGAAGAAGGCGCG
GCGATTACATTCCGGTTTGCTAGCGGGGTGGTGGGCACGTTCGTGGTGAG
TGATTGTGCGCCGTCGCCGTGGAATTTCGAGGCCGGGACGGGTGAGAATC
CGATTATTCCTAAAGTGGGTGGTGTAGGAGGAGGGTTCTATAGGGTTTTG
GGAAGTCGGGGGTCGTTGAGCGTGCCGGATTTGAAGAGGTGGAGTTATGA
TGGGGTTGAGGGGGAGAAGGGGTGGAATCAGAGATTACAAGTGGAGGAAT
TTGAGGTCGATGAGGGAGTGCCGTTTGATTTGCAATTGGAGCATTTTGTG
CGTGTGTTAGAGAGGGGAGAGACGCCGAGGTGTGATGCTGTCGAGGGATT
GAGGGCGTTGGTGGTGGTTGATGCTGTGAAGAGGGCGATGGAGACGGAGG
AGGTGGTGAAGGTGGAGAGTGTTGAGGAGATTTTGGCGAGGAATGAATGA
GTAGTTGATGGGATGAAGTGAGGCGGATATTAGAGATTTTGCTAGTATGA
TATCGAATAAAAATATTATAA back to topCoding sequence (CDS) from alignment at ch8:306229..307649+ >KJC3_011324-T1 ID=KJC3_011324-T1|Name=KJC3_011324-T1|organism=Aspergillus niger KJC3|type=CDS|length=1122bp|location=Sequence derived from alignment at ch8:306229..307649+ (Aspergillus niger KJC3)
ATGCTCAACGTCATCATCGTCGGCGCCGGCCTCATCGGCCCCCGCCACGC
ACAATCTGTTATCACCAACCCCTCCACCAACCTTCTTGCCTTGGTCGACC
CCTCCCCAAGTGCGTCATCCGTGGCTAAAACCCTCAACACGCTCTACTTC
CCCTCATTATCAGCCCTACTGTCTTCTGTACCAAACATCCCACACCCAGA
CGCCGCCATAATCTGCACCCCCAACCACACGCACGTTCCCGTGGCTCTCG
AACTCATCAGCCACAACATCCACATCTTACTCGAGAAACCCATTAGCGAT
ACCATCACCACTGCGCTTCCCTTGCTCCAAGCGCAGCAAAAGTATCCAGA
TGTGAAGATCCTCATCGGCCACCATCGGAGATTCAACCCATACATCACCA
AAACCAAGGAAATCCTCGAGTCCGGGTCACTGGGTCCAATTATTGCTCTA
TCCGGACTATGGACTCTATACAAGCCAGCATCATACTTCACCGGTGCTAC
CGAGTGGAGAAGGGATAAGGCTAAAGGTGGCGTATTGAGTATTAACCTCA
TTCATGATGTGGATCTACTCCACTACCTATTCGGTCCTATTACGCGCGTT
TACGCAGAGAAAACCCTCCCTCAGCGCGGGGGTCCAGATGGGAATGAGAA
TCACACCGCGGAAGAAGGCGCGGCGATTACATTCCGGTTTGCTAGCGGGG
TGGTGGGCACGTTCGTGGTGAGTGATTGTGCGCCGTCGCCGTGGAATTTC
GAGGCCGGGACGGGTGAGAATCCGATTATTCCTAAAGTGGGTGGTGTAGG
AGGAGGGTTCTATAGGGTTTTGGGAAGTCGGGGGTCGTTGAGCGTGCCGG
ATTTGAAGAGGTGGAGTTATGATGGGGTTGAGGGGGAGAAGGGGTGGAAT
CAGAGATTACAAGTGGAGGAATTTGAGGTCGATGAGGGAGTGCCGTTTGA
TTTGCAATTGGAGCATTTTGTGCGTGTGTTAGAGAGGGGAGAGACGCCGA
GGTGTGATGCTGTCGAGGGATTGAGGGCGTTGGTGGTGGTTGATGCTGTG
AAGAGGGCGATGGAGACGGAGGAGGTGGTGAAGGTGGAGAGTGTTGAGGA
GATTTTGGCGAGGAATGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011324-T1.utr5p1 | KJC3_011324-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011324-T1.utr3p1 | KJC3_011324-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR000683 |
| DBxref | InterPro:IPR004104 |
| DBxref | PFAM:PF02894 |
| DBxref | PFAM:PF01408 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:306229..307649 + |
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