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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:316560..318166+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011328-T1 ID=KJC3_011328-T1|Name=KJC3_011328-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1607bp|location=Sequence derived from alignment at ch8:316560..318166+ (Aspergillus niger KJC3)
CTTAACATAACCGTATTAACTCCCCACTCATGTCCACTTCCCCCCATGTT
GCCTCAAATTTATGTCTGACACCCATGTCCTTGTCTGCACCACAAGGCTG
ATATCGACCCTGCTTTCAATCGTGACGCCATGGCCATCTACGGTGGTGCA
GCGCCTTCACTGGCGGGCAGTGTCATTATGTTGACGACGCTGGCATTGTT
GACTTATGGCCTGCGGATTTATTGCAGGGTGACCAGGAAGTCATGGAGTG
TGGAGGATTGGATCATGACGGCTGCATTGGTACGTCCAGAGGCTATCGAA
GCTTTACTGGTGGCTAACTGTCGTAGGTGCCATTCGCTGTGCTGGTAGCT
GGATGTCTGGGGGGCGCATTCAATGGAATTGGCATTCGTGATTCTAGGTT
GGCAGAGCCACAAAATGTCAAATACCAAGCAGAAGGACAGAAGGTAGGAA
CAGTGCGAGTATGTTCAGCTACATAATACTGACTCTTCAGTTTTTCCTCA
TCTTCGAAGTCGGTTACTGCTCCGCCATTATTCCCATCAAGCTCAGTATC
AGCTGGATGTTGATCCGAGTAGCCGAGGGTCGCAAAGCGTACCTCTATGC
GCAATACGTGGTGATTGTCGTCTTTGTGCTTATGAACATCATCGCATTGA
TCTTTATTCTGATCAACTGCATTCCTGTTGAGTACGATACCCGACCTACC
TGAGGGTTACAGCCGATACTGACTTTACAGCGCGGCCTGGAATACGGAAC
TGCTCAAGCAAGGAGGACACTGCCAACCATCCTACGTATTGGCCGATGTC
TACTACGCCTGCACAGCCGTGAATATTCTCACCGACTGGGTGACAGCTTT
GATGTGCGACTCCTTCCAGCTATTATCGAATACCACTGACTGAAGTAGGC
CTGTACCTCTGCTCTGGAACGTCCAACTCAACCGCAACACCAAGATTTCG
ATTGTCGGCCTGATGGGCCTGGGTATCTTGTAAGACCCGTTTTTCCTATA
CCTTGCCCCGATGGCATGAACTAACTCATGGCCTCCTCCACAGCGCCTCC
ATGTCCGCCTGCGTCCGTCTTAAATACACCGTCGCCCTAACCAGCCAATC
CAACTACCTCTACAGCGTCACCAACGTGGTGATCTGGGGATTCGCCGAAA
ACGCCCTGGGAATGATCGTCGGCAACGTCGCGACACTGCGCCCGCTGTTC
CGCATCCTCCGCGACCGCAAGACATCGTCCAACAACAAATACAACTCTCG
GGGGTACTACAGCTCTCAGCGCACCGGCCCGGCAAACATGTATTCTCGCA
ACTACGAGCTGGCTGAGCAGGGGAAGCACACTAACCAGATCACCACTACC
TCGATGGCCGATCATACGCGACGACCTAGCCAGATGAGCGACGGGGACAG
TCAGAAGCAGATTCTAGCGGGCGGAACTCCTCCGGGAGACACGGATATTC
TTGTTAGTCGGCAGGTTATTGTGGCATATGATTAGCATTGGTTGGTCGGT
TGGTCGGTTGGTCGGAGTTGGGGGCATCTTGTGTACTACATTCCTTTAGA
AATTTCCTTAATCTTATTAAACTATAAATGAAATATAGAAAAAAGAATTG
AATGACA back to topCoding sequence (CDS) from alignment at ch8:316560..318166+ >KJC3_011328-T1 ID=KJC3_011328-T1|Name=KJC3_011328-T1|organism=Aspergillus niger KJC3|type=CDS|length=6624bp|location=Sequence derived from alignment at ch8:316560..318166+ (Aspergillus niger KJC3)
ATGGCCATCTACGGTGGTGCAGCGCCTTCACTGGCGGGCAGTGTCATTAT
GTTGACGACGCTGGCATTGTTGACTTATGGCCTGCGGATTTATTGCAGGG
TGACCAGGAAGTCATGGAGTGTGGAGGATTGGATCATGACGGCTGCATTG
GTGCCATTCGCTGTGCTGGTAGCTGGATGTCTGGGGGGCGCATTCAATGG
AATTGGCATTCGTGATTCTAGGTTGGCAGAGCCACAAAATGTCAAATACC
AAGCAGAAGGACAGAAGTTTTTCCTCATCTTCGAAGTCGGTTACTGCTCC
GCCATTATTCCCATCAAGCTCAGTATCAGCTGGATGTTGATCCGAGTAGC
CGAGGGTCGCAAAGCGTACCTCTATGCGCAATACGTGGTGATTGTCGTCT
TTGTGCTTATGAACATCATCGCATTGATCTTTATTCTGATCAACTGCATT
CCTGTTGACGCGGCCTGGAATACGGAACTGCTCAAGCAAGGAGGACACTG
CCAACCATCCTACGTATTGGCCGATGTCTACTACGCCTGCACAGCCGTGA
ATATTCTCACCGACTGGGTGACAGCTTTGATGCCTGTACCTCTGCTCTGG
AACGTCCAACTCAACCGCAACACCAAGATTTCGATTGTCGGCCTGATGGG
CCTGGGTATCTTCGCCTCCATGTCCGCCTGCGTCCGTCTTAAATACACCG
TCGCCCTAACCAGCCAATCCAACTACCTCTACAGCGTCACCAACGTGGTG
ATCTGGGGATTCGCCGAAAACGCCCTGGGAATGATCGTCGGCAACGTCGC
GACACTGCGCCCGCTGTTCCGCATCCTCCGCGACCGCAAGACATCGTCCA
ACAACAAATACAACTCTCGGGGGTACTACAGCTCTCAGCGCACCGGCCCG
GCAAACATGTATTCTCGCAACTACGAGCTGGCTGAGCAGGGGAAGCACAC
TAACCAGATCACCACTACCTCGATGGCCGATCATACGCGACGACCTAGCC
AGATGAGCGACGGGGACAGTCAGAAGCAGATTCTAGCGGGCGGAACTCCT
CCGGGAGACACGGATATTCTTGTTAGTCGGCAGGTTATTGTGGCATATGA
TTAGATGGCCATCTACGGTGGTGCAGCGCCTTCACTGGCGGGCAGTGTCA
TTATGTTGACGACGCTGGCATTGTTGACTTATGGCCTGCGGATTTATTGC
AGGGTGACCAGGAAGTCATGGAGTGTGGAGGATTGGATCATGACGGCTGC
ATTGGTGCCATTCGCTGTGCTGGTAGCTGGATGTCTGGGGGGCGCATTCA
ATGGAATTGGCATTCGTGATTCTAGGTTGGCAGAGCCACAAAATGTCAAA
TACCAAGCAGAAGGACAGAAGTTTTTCCTCATCTTCGAAGTCGGTTACTG
CTCCGCCATTATTCCCATCAAGCTCAGTATCAGCTGGATGTTGATCCGAG
TAGCCGAGGGTCGCAAAGCGTACCTCTATGCGCAATACGTGGTGATTGTC
GTCTTTGTGCTTATGAACATCATCGCATTGATCTTTATTCTGATCAACTG
CATTCCTGTTGACGCGGCCTGGAATACGGAACTGCTCAAGCAAGGAGGAC
ACTGCCAACCATCCTACGTATTGGCCGATGTCTACTACGCCTGCACAGCC
GTGAATATTCTCACCGACTGGGTGACAGCTTTGATGCCTGTACCTCTGCT
CTGGAACGTCCAACTCAACCGCAACACCAAGATTTCGATTGTCGGCCTGA
TGGGCCTGGGTATCTTCGCCTCCATGTCCGCCTGCGTCCGTCTTAAATAC
ACCGTCGCCCTAACCAGCCAATCCAACTACCTCTACAGCGTCACCAACGT
GGTGATCTGGGGATTCGCCGAAAACGCCCTGGGAATGATCGTCGGCAACG
TCGCGACACTGCGCCCGCTGTTCCGCATCCTCCGCGACCGCAAGACATCG
TCCAACAACAAATACAACTCTCGGGGGTACTACAGCTCTCAGCGCACCGG
CCCGGCAAACATGTATTCTCGCAACTACGAGCTGGCTGAGCAGGGGAAGC
ACACTAACCAGATCACCACTACCTCGATGGCCGATCATACGCGACGACCT
AGCCAGATGAGCGACGGGGACAGTCAGAAGCAGATTCTAGCGGGCGGAAC
TCCTCCGGGAGACACGGATATTCTTGTTAGTCGGCAGGTTATTGTGGCAT
ATGATTAGATGGCCATCTACGGTGGTGCAGCGCCTTCACTGGCGGGCAGT
GTCATTATGTTGACGACGCTGGCATTGTTGACTTATGGCCTGCGGATTTA
TTGCAGGGTGACCAGGAAGTCATGGAGTGTGGAGGATTGGATCATGACGG
CTGCATTGGTGCCATTCGCTGTGCTGGTAGCTGGATGTCTGGGGGGCGCA
TTCAATGGAATTGGCATTCGTGATTCTAGGTTGGCAGAGCCACAAAATGT
CAAATACCAAGCAGAAGGACAGAAGTTTTTCCTCATCTTCGAAGTCGGTT
ACTGCTCCGCCATTATTCCCATCAAGCTCAGTATCAGCTGGATGTTGATC
CGAGTAGCCGAGGGTCGCAAAGCGTACCTCTATGCGCAATACGTGGTGAT
TGTCGTCTTTGTGCTTATGAACATCATCGCATTGATCTTTATTCTGATCA
ACTGCATTCCTGTTGACGCGGCCTGGAATACGGAACTGCTCAAGCAAGGA
GGACACTGCCAACCATCCTACGTATTGGCCGATGTCTACTACGCCTGCAC
AGCCGTGAATATTCTCACCGACTGGGTGACAGCTTTGATGCCTGTACCTC
TGCTCTGGAACGTCCAACTCAACCGCAACACCAAGATTTCGATTGTCGGC
CTGATGGGCCTGGGTATCTTCGCCTCCATGTCCGCCTGCGTCCGTCTTAA
ATACACCGTCGCCCTAACCAGCCAATCCAACTACCTCTACAGCGTCACCA
ACGTGGTGATCTGGGGATTCGCCGAAAACGCCCTGGGAATGATCGTCGGC
AACGTCGCGACACTGCGCCCGCTGTTCCGCATCCTCCGCGACCGCAAGAC
ATCGTCCAACAACAAATACAACTCTCGGGGGTACTACAGCTCTCAGCGCA
CCGGCCCGGCAAACATGTATTCTCGCAACTACGAGCTGGCTGAGCAGGGG
AAGCACACTAACCAGATCACCACTACCTCGATGGCCGATCATACGCGACG
ACCTAGCCAGATGAGCGACGGGGACAGTCAGAAGCAGATTCTAGCGGGCG
GAACTCCTCCGGGAGACACGGATATTCTTGTTAGTCGGCAGGTTATTGTG
GCATATGATTAGATGGCCATCTACGGTGGTGCAGCGCCTTCACTGGCGGG
CAGTGTCATTATGTTGACGACGCTGGCATTGTTGACTTATGGCCTGCGGA
TTTATTGCAGGGTGACCAGGAAGTCATGGAGTGTGGAGGATTGGATCATG
ACGGCTGCATTGGTGCCATTCGCTGTGCTGGTAGCTGGATGTCTGGGGGG
CGCATTCAATGGAATTGGCATTCGTGATTCTAGGTTGGCAGAGCCACAAA
ATGTCAAATACCAAGCAGAAGGACAGAAGTTTTTCCTCATCTTCGAAGTC
GGTTACTGCTCCGCCATTATTCCCATCAAGCTCAGTATCAGCTGGATGTT
GATCCGAGTAGCCGAGGGTCGCAAAGCGTACCTCTATGCGCAATACGTGG
TGATTGTCGTCTTTGTGCTTATGAACATCATCGCATTGATCTTTATTCTG
ATCAACTGCATTCCTGTTGACGCGGCCTGGAATACGGAACTGCTCAAGCA
AGGAGGACACTGCCAACCATCCTACGTATTGGCCGATGTCTACTACGCCT
GCACAGCCGTGAATATTCTCACCGACTGGGTGACAGCTTTGATGCCTGTA
CCTCTGCTCTGGAACGTCCAACTCAACCGCAACACCAAGATTTCGATTGT
CGGCCTGATGGGCCTGGGTATCTTCGCCTCCATGTCCGCCTGCGTCCGTC
TTAAATACACCGTCGCCCTAACCAGCCAATCCAACTACCTCTACAGCGTC
ACCAACGTGGTGATCTGGGGATTCGCCGAAAACGCCCTGGGAATGATCGT
CGGCAACGTCGCGACACTGCGCCCGCTGTTCCGCATCCTCCGCGACCGCA
AGACATCGTCCAACAACAAATACAACTCTCGGGGGTACTACAGCTCTCAG
CGCACCGGCCCGGCAAACATGTATTCTCGCAACTACGAGCTGGCTGAGCA
GGGGAAGCACACTAACCAGATCACCACTACCTCGATGGCCGATCATACGC
GACGACCTAGCCAGATGAGCGACGGGGACAGTCAGAAGCAGATTCTAGCG
GGCGGAACTCCTCCGGGAGACACGGATATTCTTGTTAGTCGGCAGGTTAT
TGTGGCATATGATTAGATGGCCATCTACGGTGGTGCAGCGCCTTCACTGG
CGGGCAGTGTCATTATGTTGACGACGCTGGCATTGTTGACTTATGGCCTG
CGGATTTATTGCAGGGTGACCAGGAAGTCATGGAGTGTGGAGGATTGGAT
CATGACGGCTGCATTGGTGCCATTCGCTGTGCTGGTAGCTGGATGTCTGG
GGGGCGCATTCAATGGAATTGGCATTCGTGATTCTAGGTTGGCAGAGCCA
CAAAATGTCAAATACCAAGCAGAAGGACAGAAGTTTTTCCTCATCTTCGA
AGTCGGTTACTGCTCCGCCATTATTCCCATCAAGCTCAGTATCAGCTGGA
TGTTGATCCGAGTAGCCGAGGGTCGCAAAGCGTACCTCTATGCGCAATAC
GTGGTGATTGTCGTCTTTGTGCTTATGAACATCATCGCATTGATCTTTAT
TCTGATCAACTGCATTCCTGTTGACGCGGCCTGGAATACGGAACTGCTCA
AGCAAGGAGGACACTGCCAACCATCCTACGTATTGGCCGATGTCTACTAC
GCCTGCACAGCCGTGAATATTCTCACCGACTGGGTGACAGCTTTGATGCC
TGTACCTCTGCTCTGGAACGTCCAACTCAACCGCAACACCAAGATTTCGA
TTGTCGGCCTGATGGGCCTGGGTATCTTCGCCTCCATGTCCGCCTGCGTC
CGTCTTAAATACACCGTCGCCCTAACCAGCCAATCCAACTACCTCTACAG
CGTCACCAACGTGGTGATCTGGGGATTCGCCGAAAACGCCCTGGGAATGA
TCGTCGGCAACGTCGCGACACTGCGCCCGCTGTTCCGCATCCTCCGCGAC
CGCAAGACATCGTCCAACAACAAATACAACTCTCGGGGGTACTACAGCTC
TCAGCGCACCGGCCCGGCAAACATGTATTCTCGCAACTACGAGCTGGCTG
AGCAGGGGAAGCACACTAACCAGATCACCACTACCTCGATGGCCGATCAT
ACGCGACGACCTAGCCAGATGAGCGACGGGGACAGTCAGAAGCAGATTCT
AGCGGGCGGAACTCCTCCGGGAGACACGGATATTCTTGTTAGTCGGCAGG
TTATTGTGGCATATGATTAGATGGCCATCTACGGTGGTGCAGCGCCTTCA
CTGGCGGGCAGTGTCATTATGTTGACGACGCTGGCATTGTTGACTTATGG
CCTGCGGATTTATTGCAGGGTGACCAGGAAGTCATGGAGTGTGGAGGATT
GGATCATGACGGCTGCATTGGTGCCATTCGCTGTGCTGGTAGCTGGATGT
CTGGGGGGCGCATTCAATGGAATTGGCATTCGTGATTCTAGGTTGGCAGA
GCCACAAAATGTCAAATACCAAGCAGAAGGACAGAAGTTTTTCCTCATCT
TCGAAGTCGGTTACTGCTCCGCCATTATTCCCATCAAGCTCAGTATCAGC
TGGATGTTGATCCGAGTAGCCGAGGGTCGCAAAGCGTACCTCTATGCGCA
ATACGTGGTGATTGTCGTCTTTGTGCTTATGAACATCATCGCATTGATCT
TTATTCTGATCAACTGCATTCCTGTTGACGCGGCCTGGAATACGGAACTG
CTCAAGCAAGGAGGACACTGCCAACCATCCTACGTATTGGCCGATGTCTA
CTACGCCTGCACAGCCGTGAATATTCTCACCGACTGGGTGACAGCTTTGA
TGCCTGTACCTCTGCTCTGGAACGTCCAACTCAACCGCAACACCAAGATT
TCGATTGTCGGCCTGATGGGCCTGGGTATCTTCGCCTCCATGTCCGCCTG
CGTCCGTCTTAAATACACCGTCGCCCTAACCAGCCAATCCAACTACCTCT
ACAGCGTCACCAACGTGGTGATCTGGGGATTCGCCGAAAACGCCCTGGGA
ATGATCGTCGGCAACGTCGCGACACTGCGCCCGCTGTTCCGCATCCTCCG
CGACCGCAAGACATCGTCCAACAACAAATACAACTCTCGGGGGTACTACA
GCTCTCAGCGCACCGGCCCGGCAAACATGTATTCTCGCAACTACGAGCTG
GCTGAGCAGGGGAAGCACACTAACCAGATCACCACTACCTCGATGGCCGA
TCATACGCGACGACCTAGCCAGATGAGCGACGGGGACAGTCAGAAGCAGA
TTCTAGCGGGCGGAACTCCTCCGGGAGACACGGATATTCTTGTTAGTCGG
CAGGTTATTGTGGCATATGATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011328-T1.utr5p1 | KJC3_011328-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011328-T1.utr3p1 | KJC3_011328-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:316560..318166 + |
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