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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:328080..329003+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011334-T1 ID=KJC3_011334-T1|Name=KJC3_011334-T1|organism=Aspergillus niger KJC3|type=mRNA|length=924bp|location=Sequence derived from alignment at ch8:328080..329003+ (Aspergillus niger KJC3)
AAGAACACCAGATACTCGTCCCCTTCAACCTGAACCTTTCTCTCTCCAAA
CCCTCCTCTCTCCACAAACTACAAACAACAACAAGAATCAAAACAACAAG
AAGCACCCCTCACAGCTATGCCCTCCCGCAAATACAAATCCAAATCCAAA
TCCACCCTCTCCGGCAACCGCTGGTCCATGTACCCAGCCCTCCACGCCGA
CGTCCTCACCCAGCTCTCATCCTCGACCTTCCCAATCACCTCTCTAACCT
TCCACCCCTTCGACGACTCCGACACTTGCATAGAAGAATACGACACGAAC
ATCATGGGTCGATTCATCTGCCCGAACAACTCCTGCGGGTCAAGCGGCTG
GGCGAGCAAGAAGATCGCCATCACGATCCGGCTGTACGAAGGGGATGAGT
ACAACGCGCGAGTGTATCATCAGCGCTGCAAGGGATGTAATGCGCTTAGT
CGGCCATTCCTGGATGAGAAGAGCTATGCGGAGAGGATTGCGTATCGGAT
GAAGAGGTGGTATGATGTGGATGTGGAGAGGCCGGTGTATAATGGGAGTG
GGAATTCCAAGCCGCATAATAGGGATTTGTGTGAGGGGTGTAAGGTGGGG
AGGTGTTCGTTTGCACGGGAGCGTGATGTCTTTTTTGTAAGGGGTGGGTT
CTTGTGAATGAGATGTTGGTCTTAATATTGATATTGATTGGTCAGTCTGG
TGCTATCTCACATTAAGTAGCAGCATGGGATATTGAGCGATATCTGTAAT
GACAGACATGAATCAGGTTTGCTTGGGTACAAAGTGTGCAGGATTAACCA
AGGTGTGAATTGAAGATATAATCAAGGACATAAAATTAGAAAGGTATCGA
CTAAGCACCTCCGAGCAAATCAAAAACAGATAACAAAAGGTGCCGTTCAA
TCTTGGGCGGGTGCTTGTTAAGCT back to topCoding sequence (CDS) from alignment at ch8:328080..329003+ >KJC3_011334-T1 ID=KJC3_011334-T1|Name=KJC3_011334-T1|organism=Aspergillus niger KJC3|type=CDS|length=1134bp|location=Sequence derived from alignment at ch8:328080..329003+ (Aspergillus niger KJC3)
ATGCCCTCCCGCAAATACAAATCCAAATCCAAATCCACCCTCTCCGGCAA
CCGCTGGTCCATGTACCCAGCCCTCCACGCCGACGTCCTCACCCAGCTCT
CATCCTCGACCTTCCCAATCACCTCTCTAACCTTCCACCCCTTCGACGAC
TCCGACACTTGCATAGAAGAATACGACACGAACATCATGGGTCGATTCAT
CTGCCCGAACAACTCCTGCGGGTCAAGCGGCTGGGCGAGCAAGAAGATCG
CCATCACGATCCGGCTGTACGAAGGGGATGAGTACAACGCGCGAGTGTAT
CATCAGCGCTGCAAGGGATGTAATGCGCTTAGTCGGCCATTCCTGGATGA
GAAGAGCTATGCGGAGAGGATTGCGTATCGGATGAAGAGGTGGTATGATG
TGGATGTGGAGAGGCCGGTGTATAATGGGAGTGGGAATTCCAAGCCGCAT
AATAGGGATTTGTGTGAGGGGTGTAAGGTGGGGAGGTGTTCGTTTGCACG
GGAGCGTGATGTCTTTTTTGTAAGGGTCTGGTGCTATCTCACATTAAGTA
GCAGCATGGGATATTGAATGCCCTCCCGCAAATACAAATCCAAATCCAAA
TCCACCCTCTCCGGCAACCGCTGGTCCATGTACCCAGCCCTCCACGCCGA
CGTCCTCACCCAGCTCTCATCCTCGACCTTCCCAATCACCTCTCTAACCT
TCCACCCCTTCGACGACTCCGACACTTGCATAGAAGAATACGACACGAAC
ATCATGGGTCGATTCATCTGCCCGAACAACTCCTGCGGGTCAAGCGGCTG
GGCGAGCAAGAAGATCGCCATCACGATCCGGCTGTACGAAGGGGATGAGT
ACAACGCGCGAGTGTATCATCAGCGCTGCAAGGGATGTAATGCGCTTAGT
CGGCCATTCCTGGATGAGAAGAGCTATGCGGAGAGGATTGCGTATCGGAT
GAAGAGGTGGTATGATGTGGATGTGGAGAGGCCGGTGTATAATGGGAGTG
GGAATTCCAAGCCGCATAATAGGGATTTGTGTGAGGGGTGTAAGGTGGGG
AGGTGTTCGTTTGCACGGGAGCGTGATGTCTTTTTTGTAAGGGTCTGGTG
CTATCTCACATTAAGTAGCAGCATGGGATATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011334-T1.utr5p1 | KJC3_011334-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011334-T1.utr3p1 | KJC3_011334-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027377 |
| DBxref | PFAM:PF13695 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:328080..329003 + |
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