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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:356177..357724- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011347-T1 ID=KJC3_011347-T1|Name=KJC3_011347-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1548bp|location=Sequence derived from alignment at ch8:356177..357724- (Aspergillus niger KJC3)
ATGGACACCGGCATCATCGGCTCCGTGGTAGTAATGGACCAATTCAAGCA
GAAATTCGGATCCTTTTCATCCATCGTCCACGGTCTAATAGTTTCCTCCA
TCCTGATCCCCGCCGCCTTCTCATCCTTCTTTGGTGGAAAGCTAGCCGAC
TGGATCGGACGACCCAAGAGCATCACAATCGGTGCTCTCATCTTCGGCAT
CGGATGTGCGATCGAGGCGGGCGCAGTGCATCTGGCCATGTTCATCGTTG
GCCGTGTCGTCGAGGGACTCGGAGAGGGTCTATACCTGGGGACCCTTGTA
GTGTAAGCCCTCCAACCCCACTCTCTCCTCTCTACTATCAACCCAAAGCG
ATAGCTAATAAGCTATAACAGATACATCTGCGAGATCTCCCCGCCAAGTC
AACGAGGCCCACTAACCACTGGCCCTCAACTCCTCATCACAATGGGCCTC
GTAGTCGGCTTCTTCACCTGCTACGGATGCGAGAAGCTACACTCATCCAT
GGCATGGCGAACGCCATTCACCGTCCTGGCTTGCATTTCCATTGTCTTTA
GTCTAGCTGCTTTCTTATGGCTGATTGACTCGCCCCGATGGCTCACGCTT
CATAATCGCGTCGACGATGCCACTCGCGCTTGGGAGTATTTGCAAGTAAG
CGAGGCCGATCGCGAGGAACTCCTCGAAGAGGAAGAGCAAGTCGACGTTC
ATGAAGAGGCCTTGACGCATCCGTTGGCCCCGACGGGGAGTATTCTTGCC
CCGAATACCCTGGATCAGGTAGTTTCGCGGCATAGTCGGGTCTCTCATCG
AACTAAGCCTAAGGGAATTGAAGAAGCAACTCTATTCGACGCATTCAAGC
CCGATGTGCGTAATCGGACTCTGTTGGGCTTGTTCCTCATGGGCATGCAG
CAGTTAGCTGGGATTGATGGGGTGTTATACGTGAGTTTTCCCACCCATAT
TTATTCTCTTACTTGAACTAACTTCCAAAAGTACGCCCCCATGCTCTTCG
AACAAGCCGGCATGACCTCTTCACAAGCCAGCTTCCTCGCCTCCGGCGTC
TCCGGCATCGTCATCTTCGTCGTGACCATTCCGGCCCTCATCTACGCCGA
CTCCTGGGGCCGCCGCAGCAACGTCATCCTCGGCGGTCTCGGGCTCACGA
TAACCATGTTCGTAATCGGCTCCCTGTACGCCGCCGACGCAGTCCACCAT
TCGACCGGCGCTGGTCGCTGGGTCGTCATCGTCGCGATCTATCTCTTCGC
TGCTATTTACAGTGTGTCCTGGGGTGTGAGTTGTAAGGTCTACGCGGCGG
AGATCCAGCCCCAGCGGACGAGAGCGAGCGCGACGTGTCTTGCGCATGGA
AGTAACTGGGTGTCGAATTTCTTTGTTGCGCTGATTACGCCGGTTCTTTT
GGCGAAAAGTAGCTGTGCCGCGTACTTTCTGTTTGGAGGGTGCACGGCGT
TGACGATTGTTGTTTGTGGGTTTTGGATGCCCGAGACGAAGGGGAGGTCG
TTGGAGGAGGTGGAGAGGTGTTTTGTTAGAGGGAAGGAGGATACATAA back to topCoding sequence (CDS) from alignment at ch8:356177..357724- >KJC3_011347-T1 ID=KJC3_011347-T1|Name=KJC3_011347-T1|organism=Aspergillus niger KJC3|type=CDS|length=4284bp|location=Sequence derived from alignment at ch8:356177..357724- (Aspergillus niger KJC3)
TACGCCCCCATGCTCTTCGAACAAGCCGGCATGACCTCTTCACAAGCCAG
CTTCCTCGCCTCCGGCGTCTCCGGCATCGTCATCTTCGTCGTGACCATTC
CGGCCCTCATCTACGCCGACTCCTGGGGCCGCCGCAGCAACGTCATCCTC
GGCGGTCTCGGGCTCACGATAACCATGTTCGTAATCGGCTCCCTGTACGC
CGCCGACGCAGTCCACCATTCGACCGGCGCTGGTCGCTGGGTCGTCATCG
TCGCGATCTATCTCTTCGCTGCTATTTACAGTGTGTCCTGGGGTGTGAGT
TGTAAGGTCTACGCGGCGGAGATCCAGCCCCAGCGGACGAGAGCGAGCGC
GACGTGTCTTGCGCATGGAAGTAACTGGGTGTCGAATTTCTTTGTTGCGC
TGATTACGCCGGTTCTTTTGGCGAAAAGTAGCTGTGCCGCGTACTTTCTG
TTTGGAGGGTGCACGGCGTTGACGATTGTTGTTTGTGGGTTTTGGATGCC
CGAGACGAAGGGGAGGTCGTTGGAGGAGGTGGAGAGGTGTTTTGTTAGAG
GGAAGGAGGATACATAAATACATCTGCGAGATCTCCCCGCCAAGTCAACG
AGGCCCACTAACCACTGGCCCTCAACTCCTCATCACAATGGGCCTCGTAG
TCGGCTTCTTCACCTGCTACGGATGCGAGAAGCTACACTCATCCATGGCA
TGGCGAACGCCATTCACCGTCCTGGCTTGCATTTCCATTGTCTTTAGTCT
AGCTGCTTTCTTATGGCTGATTGACTCGCCCCGATGGCTCACGCTTCATA
ATCGCGTCGACGATGCCACTCGCGCTTGGGAGTATTTGCAAGTAAGCGAG
GCCGATCGCGAGGAACTCCTCGAAGAGGAAGAGCAAGTCGACGTTCATGA
AGAGGCCTTGACGCATCCGTTGGCCCCGACGGGGAGTATTCTTGCCCCGA
ATACCCTGGATCAGGTAGTTTCGCGGCATAGTCGGGTCTCTCATCGAACT
AAGCCTAAGGGAATTGAAGAAGCAACTCTATTCGACGCATTCAAGCCCGA
TGTGCGTAATCGGACTCTGTTGGGCTTGTTCCTCATGGGCATGCAGCAGT
TAGCTGGGATTGATGGGGTGTTATACATGGACACCGGCATCATCGGCTCC
GTGGTAGTAATGGACCAATTCAAGCAGAAATTCGGATCCTTTTCATCCAT
CGTCCACGGTCTAATAGTTTCCTCCATCCTGATCCCCGCCGCCTTCTCAT
CCTTCTTTGGTGGAAAGCTAGCCGACTGGATCGGACGACCCAAGAGCATC
ACAATCGGTGCTCTCATCTTCGGCATCGGATGTGCGATCGAGGCGGGCGC
AGTGCATCTGGCCATGTTCATCGTTGGCCGTGTCGTCGAGGGACTCGGAG
AGGGTCTATACCTGGGGACCCTTGTAGTTACGCCCCCATGCTCTTCGAAC
AAGCCGGCATGACCTCTTCACAAGCCAGCTTCCTCGCCTCCGGCGTCTCC
GGCATCGTCATCTTCGTCGTGACCATTCCGGCCCTCATCTACGCCGACTC
CTGGGGCCGCCGCAGCAACGTCATCCTCGGCGGTCTCGGGCTCACGATAA
CCATGTTCGTAATCGGCTCCCTGTACGCCGCCGACGCAGTCCACCATTCG
ACCGGCGCTGGTCGCTGGGTCGTCATCGTCGCGATCTATCTCTTCGCTGC
TATTTACAGTGTGTCCTGGGGTGTGAGTTGTAAGGTCTACGCGGCGGAGA
TCCAGCCCCAGCGGACGAGAGCGAGCGCGACGTGTCTTGCGCATGGAAGT
AACTGGGTGTCGAATTTCTTTGTTGCGCTGATTACGCCGGTTCTTTTGGC
GAAAAGTAGCTGTGCCGCGTACTTTCTGTTTGGAGGGTGCACGGCGTTGA
CGATTGTTGTTTGTGGGTTTTGGATGCCCGAGACGAAGGGGAGGTCGTTG
GAGGAGGTGGAGAGGTGTTTTGTTAGAGGGAAGGAGGATACATAAATACA
TCTGCGAGATCTCCCCGCCAAGTCAACGAGGCCCACTAACCACTGGCCCT
CAACTCCTCATCACAATGGGCCTCGTAGTCGGCTTCTTCACCTGCTACGG
ATGCGAGAAGCTACACTCATCCATGGCATGGCGAACGCCATTCACCGTCC
TGGCTTGCATTTCCATTGTCTTTAGTCTAGCTGCTTTCTTATGGCTGATT
GACTCGCCCCGATGGCTCACGCTTCATAATCGCGTCGACGATGCCACTCG
CGCTTGGGAGTATTTGCAAGTAAGCGAGGCCGATCGCGAGGAACTCCTCG
AAGAGGAAGAGCAAGTCGACGTTCATGAAGAGGCCTTGACGCATCCGTTG
GCCCCGACGGGGAGTATTCTTGCCCCGAATACCCTGGATCAGGTAGTTTC
GCGGCATAGTCGGGTCTCTCATCGAACTAAGCCTAAGGGAATTGAAGAAG
CAACTCTATTCGACGCATTCAAGCCCGATGTGCGTAATCGGACTCTGTTG
GGCTTGTTCCTCATGGGCATGCAGCAGTTAGCTGGGATTGATGGGGTGTT
ATACATGGACACCGGCATCATCGGCTCCGTGGTAGTAATGGACCAATTCA
AGCAGAAATTCGGATCCTTTTCATCCATCGTCCACGGTCTAATAGTTTCC
TCCATCCTGATCCCCGCCGCCTTCTCATCCTTCTTTGGTGGAAAGCTAGC
CGACTGGATCGGACGACCCAAGAGCATCACAATCGGTGCTCTCATCTTCG
GCATCGGATGTGCGATCGAGGCGGGCGCAGTGCATCTGGCCATGTTCATC
GTTGGCCGTGTCGTCGAGGGACTCGGAGAGGGTCTATACCTGGGGACCCT
TGTAGTTACGCCCCCATGCTCTTCGAACAAGCCGGCATGACCTCTTCACA
AGCCAGCTTCCTCGCCTCCGGCGTCTCCGGCATCGTCATCTTCGTCGTGA
CCATTCCGGCCCTCATCTACGCCGACTCCTGGGGCCGCCGCAGCAACGTC
ATCCTCGGCGGTCTCGGGCTCACGATAACCATGTTCGTAATCGGCTCCCT
GTACGCCGCCGACGCAGTCCACCATTCGACCGGCGCTGGTCGCTGGGTCG
TCATCGTCGCGATCTATCTCTTCGCTGCTATTTACAGTGTGTCCTGGGGT
GTGAGTTGTAAGGTCTACGCGGCGGAGATCCAGCCCCAGCGGACGAGAGC
GAGCGCGACGTGTCTTGCGCATGGAAGTAACTGGGTGTCGAATTTCTTTG
TTGCGCTGATTACGCCGGTTCTTTTGGCGAAAAGTAGCTGTGCCGCGTAC
TTTCTGTTTGGAGGGTGCACGGCGTTGACGATTGTTGTTTGTGGGTTTTG
GATGCCCGAGACGAAGGGGAGGTCGTTGGAGGAGGTGGAGAGGTGTTTTG
TTAGAGGGAAGGAGGATACATAAATACATCTGCGAGATCTCCCCGCCAAG
TCAACGAGGCCCACTAACCACTGGCCCTCAACTCCTCATCACAATGGGCC
TCGTAGTCGGCTTCTTCACCTGCTACGGATGCGAGAAGCTACACTCATCC
ATGGCATGGCGAACGCCATTCACCGTCCTGGCTTGCATTTCCATTGTCTT
TAGTCTAGCTGCTTTCTTATGGCTGATTGACTCGCCCCGATGGCTCACGC
TTCATAATCGCGTCGACGATGCCACTCGCGCTTGGGAGTATTTGCAAGTA
AGCGAGGCCGATCGCGAGGAACTCCTCGAAGAGGAAGAGCAAGTCGACGT
TCATGAAGAGGCCTTGACGCATCCGTTGGCCCCGACGGGGAGTATTCTTG
CCCCGAATACCCTGGATCAGGTAGTTTCGCGGCATAGTCGGGTCTCTCAT
CGAACTAAGCCTAAGGGAATTGAAGAAGCAACTCTATTCGACGCATTCAA
GCCCGATGTGCGTAATCGGACTCTGTTGGGCTTGTTCCTCATGGGCATGC
AGCAGTTAGCTGGGATTGATGGGGTGTTATACATGGACACCGGCATCATC
GGCTCCGTGGTAGTAATGGACCAATTCAAGCAGAAATTCGGATCCTTTTC
ATCCATCGTCCACGGTCTAATAGTTTCCTCCATCCTGATCCCCGCCGCCT
TCTCATCCTTCTTTGGTGGAAAGCTAGCCGACTGGATCGGACGACCCAAG
AGCATCACAATCGGTGCTCTCATCTTCGGCATCGGATGTGCGATCGAGGC
GGGCGCAGTGCATCTGGCCATGTTCATCGTTGGCCGTGTCGTCGAGGGAC
TCGGAGAGGGTCTATACCTGGGGACCCTTGTAGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:356177..357724 - |
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