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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:403743..405385+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011364-T1 ID=KJC3_011364-T1|Name=KJC3_011364-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1643bp|location=Sequence derived from alignment at ch8:403743..405385+ (Aspergillus niger KJC3)
CTCAGAGCACGCTTTTCATGCCCAAATAGTCACACCACCAAGCATGCCGT
CCCGGTTACACTGGTTTCACCCCGGCTGAGCATCGTCGCAGACACCAAAA
GCTGCGGTCTCCCTCCTAATCCCCATCACTGTGGCTAATTGGGCCTGAGC
TGTGCGACCTGCTCCACTGCGGGACTCTTAAGAGGCAGCTGCGGTACGAA
AGACAAGGGCCCTTCGTTGCAACCTCCCAGAAATCACATTCACCATGTTC
GGCTGGACACGGCGCTTCTCCAGTATGGCCCCTCCTGAGCGCACATTTAT
TTATCCCCTGCTGCTGCTGAACGACACCTGCTAACCATCCTTTCTCACAC
GTTCTCACAGCCGCCACATCTTTCCTCAAATCCACCACAATGGCCGTCTC
CTCCCGCCAGCAACACACCTTTCAAGTCTTCCGCGATGTGCCCCCACTTC
GCCAGCTGCGTCGAGAGCTCCTCCTCTCCAACCGGACCGTCGGTCTCGTC
CCTACCATGGGTGCCCTCCACGAAGGCCATCTCTCCCTCATCCGACAAGC
CGCGGCCGAGAACACCGACGTCTTCGTCAGCATCTACGTTAATCCGACAC
AGTTCGGCGTCACAGAGGATCTCTCCAGCTACCCGCGCACTTGGGACAGC
GATGTTGCGAAGTTAGAGGAATTGAACGCGGAACTGGCCCGCCAGAACAG
TAACAACGGTCGCATCACCGCCATTCTGGCGCCCACCTCCAAGGTCATGT
ACCCTACGCTGCCTCCTTCATCCGAGATTGATGGCGACGGTTCCTTCGTG
ACCATCACCCCTCTCTCCCGGAAACTGGAGGGAGCTTCACGGCCTGTTTT
CTTCCGTGGAGTTGCGACCGTCTGCATGAAGCTGTTCAACATTGTCCATG
CCGACCGGGCTTACTTTGGTCAGAAGGACGTGCAGCAAACTGTGGTCATC
AAGCGTTTGGTGAAGGACTTCTACATCGATACGGAGATCAAGATCGGGGA
GACTGTTCGTGACCACGATGGGCTGGCAATGAGTTCGAGGAACGTTTACC
TTGGTAAGAGAAGACGGGCAGTGGGCCTGGTCCTCTACGAAGCCATGAAG
GCGGCGGAGAATGCCTACAACGCTGGCAAGGTCAACCGGAGTGAGATCCT
TGACGCAGCTAACAGCGTCACTGAACGGGTTCTGTCTGAGCAGAAGGCGT
TGGCGCCCACGGAGAGGGCGCTGTACGAAGTTGACTACATCTCGCTTGCT
GATCCGGATACTCTGGACGAGCTGGAAGTTGTTGATCCCGCTAAGGGCGC
CATTCTGAGCGGTGCAGTCAAGATGGCTCCGCTGGAGGAGGCAAAGCCGG
GCGAGGACTGCGGCCTCGGTGACGGCCAAGTTCCTGTGCGTTTGATCGAC
AACTTGATCTTCAAGCCGCGGGTTTGAACACCTCGTCCTTGTCTGTCCGT
TGCCTGGTCCATTCAAAAGCAAGTGTCATATATACCCGACGTCATTCAAT
TAGATCTCAATAGCGTACATAGAGTACATAAAAGTTCACACCCTCATATA
TATATATATATCTATATACAAATAAACAAATAAATTAAACAATCATTCTC
CTCTCAACACCTGAATACCCCTCAATCAATTACCCTTTACTTG back to topCoding sequence (CDS) from alignment at ch8:403743..405385+ >KJC3_011364-T1 ID=KJC3_011364-T1|Name=KJC3_011364-T1|organism=Aspergillus niger KJC3|type=CDS|length=2190bp|location=Sequence derived from alignment at ch8:403743..405385+ (Aspergillus niger KJC3)
ATGTTCGGCTGGACACGGCGCTTCTCCACCGCCACATCTTTCCTCAAATC
CACCACAATGGCCGTCTCCTCCCGCCAGCAACACACCTTTCAAGTCTTCC
GCGATGTGCCCCCACTTCGCCAGCTGCGTCGAGAGCTCCTCCTCTCCAAC
CGGACCGTCGGTCTCGTCCCTACCATGGGTGCCCTCCACGAAGGCCATCT
CTCCCTCATCCGACAAGCCGCGGCCGAGAACACCGACGTCTTCGTCAGCA
TCTACGTTAATCCGACACAGTTCGGCGTCACAGAGGATCTCTCCAGCTAC
CCGCGCACTTGGGACAGCGATGTTGCGAAGTTAGAGGAATTGAACGCGGA
ACTGGCCCGCCAGAACAGTAACAACGGTCGCATCACCGCCATTCTGGCGC
CCACCTCCAAGGTCATGTACCCTACGCTGCCTCCTTCATCCGAGATTGAT
GGCGACGGTTCCTTCGTGACCATCACCCCTCTCTCCCGGAAACTGGAGGG
AGCTTCACGGCCTGTTTTCTTCCGTGGAGTTGCGACCGTCTGCATGAAGC
TGTTCAACATTGTCCATGCCGACCGGGCTTACTTTGGTCAGAAGGACGTG
CAGCAAACTGTGGTCATCAAGCGTTTGGTGAAGGACTTCTACATCGATAC
GGAGATCAAGATCGGGGAGACTGTTCGTGACCACGATGGGCTGGCAATGA
GTTCGAGGAACGTTTACCTTGGTAAGAGAAGACGGGCAGTGGGCCTGGTC
CTCTACGAAGCCATGAAGGCGGCGGAGAATGCCTACAACGCTGGCAAGGT
CAACCGGAGTGAGATCCTTGACGCAGCTAACAGCGTCACTGAACGGGTTC
TGTCTGAGCAGAAGGCGTTGGCGCCCACGGAGAGGGCGCTGTACGAAGTT
GACTACATCTCGCTTGCTGATCCGGATACTCTGGACGAGCTGGAAGTTGT
TGATCCCGCTAAGGGCGCCATTCTGAGCGGTGCAGTCAAGATGGCTCCGC
TGGAGGAGGCAAAGCCGGGCGAGGACTGCGGCCTCGGTGACGGCCAAGTT
CCTGTGCGTTTGATCGACAACTTGATCTTCAAGCCGCGGGTTTGAATGTT
CGGCTGGACACGGCGCTTCTCCACCGCCACATCTTTCCTCAAATCCACCA
CAATGGCCGTCTCCTCCCGCCAGCAACACACCTTTCAAGTCTTCCGCGAT
GTGCCCCCACTTCGCCAGCTGCGTCGAGAGCTCCTCCTCTCCAACCGGAC
CGTCGGTCTCGTCCCTACCATGGGTGCCCTCCACGAAGGCCATCTCTCCC
TCATCCGACAAGCCGCGGCCGAGAACACCGACGTCTTCGTCAGCATCTAC
GTTAATCCGACACAGTTCGGCGTCACAGAGGATCTCTCCAGCTACCCGCG
CACTTGGGACAGCGATGTTGCGAAGTTAGAGGAATTGAACGCGGAACTGG
CCCGCCAGAACAGTAACAACGGTCGCATCACCGCCATTCTGGCGCCCACC
TCCAAGGTCATGTACCCTACGCTGCCTCCTTCATCCGAGATTGATGGCGA
CGGTTCCTTCGTGACCATCACCCCTCTCTCCCGGAAACTGGAGGGAGCTT
CACGGCCTGTTTTCTTCCGTGGAGTTGCGACCGTCTGCATGAAGCTGTTC
AACATTGTCCATGCCGACCGGGCTTACTTTGGTCAGAAGGACGTGCAGCA
AACTGTGGTCATCAAGCGTTTGGTGAAGGACTTCTACATCGATACGGAGA
TCAAGATCGGGGAGACTGTTCGTGACCACGATGGGCTGGCAATGAGTTCG
AGGAACGTTTACCTTGGTAAGAGAAGACGGGCAGTGGGCCTGGTCCTCTA
CGAAGCCATGAAGGCGGCGGAGAATGCCTACAACGCTGGCAAGGTCAACC
GGAGTGAGATCCTTGACGCAGCTAACAGCGTCACTGAACGGGTTCTGTCT
GAGCAGAAGGCGTTGGCGCCCACGGAGAGGGCGCTGTACGAAGTTGACTA
CATCTCGCTTGCTGATCCGGATACTCTGGACGAGCTGGAAGTTGTTGATC
CCGCTAAGGGCGCCATTCTGAGCGGTGCAGTCAAGATGGCTCCGCTGGAG
GAGGCAAAGCCGGGCGAGGACTGCGGCCTCGGTGACGGCCAAGTTCCTGT
GCGTTTGATCGACAACTTGATCTTCAAGCCGCGGGTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015940 | pantothenate biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004592 | pantoate-beta-alanine ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011364-T1.utr5p1 | KJC3_011364-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011364-T1.utr3p1 | KJC3_011364-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR042176 |
| DBxref | InterPro:IPR003721 |
| DBxref | InterPro:IPR014729 |
| DBxref | PFAM:PF02569 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:403743..405385 + |
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