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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:409769..410874- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011367-T1 ID=KJC3_011367-T1|Name=KJC3_011367-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1106bp|location=Sequence derived from alignment at ch8:409769..410874- (Aspergillus niger KJC3)
ATGTTCTCTTCATCTTCGTCTTCTTCGTCTTCTTCGTCTTCTTTCTCAAT
AAAAGTTCCTACGAAATTGAGCAATATTCACCTGACCATCCCGGACATCA
TGCCACTGTGGAACTGCTATCCATTCGATCCGGAGGTTGCACCGCTGTTC
GGTTATCACCCTTCTCTTACAGCTGGAATCCTTTTCACGATTGCTTTCCT
GGGTGTCTTAACAACCCATGTCTCGCAAGCATGCAATACCATATATCCCT
GGATAGGACTGGTGCTTTCGATTGGAGCTGCCCTTGAGTTTATCGGATGG
CTTGCCCGTACTTTGGCTTACCGCTGTCCATATACCTTTGCCATATGGCA
AATACAGCTGTCAACTCTGATGTCGGGTAAGTATACAGTTGAGGAAGTTT
ATATTGGCAATGCCCCTGGCTAAACATACAACTAGCTCCATACTTTACAA
CCGTCGGAATCTACGGAGTCTTAGATCTCATGTACGCAGTTATAGACCAA
GTTCGACTACCTTTCAGGCCGAAGCGGTGGGCAGATATCTGCATGACTAT
CGCGCTTCTTAGTCTCATTCTCCAGGTTATTGGGGGTTCGCTGGCACACA
AGGCCTCCAGTGTCGCCTCCAGTGTCGATAAAACAGTCAGCCTGGGAATC
GATATCCTGTACGCAGGCAGTCTCGTACAGCTCCTGTCGCTCAATATCTT
CATGGTGCTGTTCGGGTACCTGATAATTCGTACCAGACAGCGACTTGTCT
GGAGGATGCCAATGCTCAAAATGTTAGCTGTGCTTGCGTTTGCTTTAGTT
TGTATAATTGTTCGGGATACATATCGCATTGTGGAGTCTACGAATGGATG
GCGTGGTTATTCCTACACATATGAAATTCTAGGGTGTCTTTTCGATGGGC
TGCCTATGTTTATCGCCAATGTTACGCTGAGTATCTGGCATCCAGCAGTG
TTGTTGAACGAGGCGATGCTAATGGAGTCGAGAGTTGTGCGAGCGGAGGA
GGTCGAATTACGAAGCAGAGAAGATCAGAACGGACGAGGAAGTCGCTTGC
TTGACGAGTACCCACCTATTTCTGAGGAGCTTGAGCCAGTTCTCCGTAAA
CGATAG back to topCoding sequence (CDS) from alignment at ch8:409769..410874- >KJC3_011367-T1 ID=KJC3_011367-T1|Name=KJC3_011367-T1|organism=Aspergillus niger KJC3|type=CDS|length=2094bp|location=Sequence derived from alignment at ch8:409769..410874- (Aspergillus niger KJC3)
CTCCATACTTTACAACCGTCGGAATCTACGGAGTCTTAGATCTCATGTAC
GCAGTTATAGACCAAGTTCGACTACCTTTCAGGCCGAAGCGGTGGGCAGA
TATCTGCATGACTATCGCGCTTCTTAGTCTCATTCTCCAGGTTATTGGGG
GTTCGCTGGCACACAAGGCCTCCAGTGTCGCCTCCAGTGTCGATAAAACA
GTCAGCCTGGGAATCGATATCCTGTACGCAGGCAGTCTCGTACAGCTCCT
GTCGCTCAATATCTTCATGGTGCTGTTCGGGTACCTGATAATTCGTACCA
GACAGCGACTTGTCTGGAGGATGCCAATGCTCAAAATGTTAGCTGTGCTT
GCGTTTGCTTTAGTTTGTATAATTGTTCGGGATACATATCGCATTGTGGA
GTCTACGAATGGATGGCGTGGTTATTCCTACACATATGAAATTCTAGGGT
GTCTTTTCGATGGGCTGCCTATGTTTATCGCCAATGTTACGCTGAGTATC
TGGCATCCAGCAGTGTTGTTGAACGAGGCGATGCTAATGGAGTCGAGAGT
TGTGCGAGCGGAGGAGGTCGAATTACGAAGCAGAGAAGATCAGAACGGAC
GAGGAAGTCGCTTGCTTGACGAGTACCCACCTATTTCTGAGGAGCTTGAG
CCAGTTCTCCGTAAACGATAGATGTTCTCTTCATCTTCGTCTTCTTCGTC
TTCTTCGTCTTCTTTCTCAATAAAAGTTCCTACGAAATTGAGCAATATTC
ACCTGACCATCCCGGACATCATGCCACTGTGGAACTGCTATCCATTCGAT
CCGGAGGTTGCACCGCTGTTCGGTTATCACCCTTCTCTTACAGCTGGAAT
CCTTTTCACGATTGCTTTCCTGGGTGTCTTAACAACCCATGTCTCGCAAG
CATGCAATACCATATATCCCTGGATAGGACTGGTGCTTTCGATTGGAGCT
GCCCTTGAGTTTATCGGATGGCTTGCCCGTACTTTGGCTTACCGCTGTCC
ATATACCTTTGCCATATGGCAAATACAGCTGTCAACTCTGATGTCGGCTC
CATACTTTACAACCGTCGGAATCTACGGAGTCTTAGATCTCATGTACGCA
GTTATAGACCAAGTTCGACTACCTTTCAGGCCGAAGCGGTGGGCAGATAT
CTGCATGACTATCGCGCTTCTTAGTCTCATTCTCCAGGTTATTGGGGGTT
CGCTGGCACACAAGGCCTCCAGTGTCGCCTCCAGTGTCGATAAAACAGTC
AGCCTGGGAATCGATATCCTGTACGCAGGCAGTCTCGTACAGCTCCTGTC
GCTCAATATCTTCATGGTGCTGTTCGGGTACCTGATAATTCGTACCAGAC
AGCGACTTGTCTGGAGGATGCCAATGCTCAAAATGTTAGCTGTGCTTGCG
TTTGCTTTAGTTTGTATAATTGTTCGGGATACATATCGCATTGTGGAGTC
TACGAATGGATGGCGTGGTTATTCCTACACATATGAAATTCTAGGGTGTC
TTTTCGATGGGCTGCCTATGTTTATCGCCAATGTTACGCTGAGTATCTGG
CATCCAGCAGTGTTGTTGAACGAGGCGATGCTAATGGAGTCGAGAGTTGT
GCGAGCGGAGGAGGTCGAATTACGAAGCAGAGAAGATCAGAACGGACGAG
GAAGTCGCTTGCTTGACGAGTACCCACCTATTTCTGAGGAGCTTGAGCCA
GTTCTCCGTAAACGATAGATGTTCTCTTCATCTTCGTCTTCTTCGTCTTC
TTCGTCTTCTTTCTCAATAAAAGTTCCTACGAAATTGAGCAATATTCACC
TGACCATCCCGGACATCATGCCACTGTGGAACTGCTATCCATTCGATCCG
GAGGTTGCACCGCTGTTCGGTTATCACCCTTCTCTTACAGCTGGAATCCT
TTTCACGATTGCTTTCCTGGGTGTCTTAACAACCCATGTCTCGCAAGCAT
GCAATACCATATATCCCTGGATAGGACTGGTGCTTTCGATTGGAGCTGCC
CTTGAGTTTATCGGATGGCTTGCCCGTACTTTGGCTTACCGCTGTCCATA
TACCTTTGCCATATGGCAAATACAGCTGTCAACTCTGATGTCGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:409769..410874 - |
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