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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:416605..417477- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011370-T1 ID=KJC3_011370-T1|Name=KJC3_011370-T1|organism=Aspergillus niger KJC3|type=mRNA|length=873bp|location=Sequence derived from alignment at ch8:416605..417477- (Aspergillus niger KJC3)
TATACTCCATACTCCCTTACTACCTCACATACAACAACAATCACCCCCAC
AAAACAATCCCCTCACAGACACCTAATACAAATACTCCATATCCACCTCA
TCCAACCCAAGAAATCACCAAACCAAAATGTCCGAATCCACCGCCGAAGC
CGTCCCTCCCCCACCAACAACCTCAACTCAAGTACGCCCCATCCCTGCTA
CTTAGTACCCGATGGAAAAAGATACCCACGAACGAAACAGCGCAGCTAAC
AGCCTTACCTTGATGTTAGAACTCCGACGCGCAAGGCCAATTCTCCGCCG
CAGTGGACGATCTTCTCGACCAGCTACAACATAAATTCGATGGTGTTTCG
CGGGAGATGTTTGGGAAGTGTACGTCTTTATCCTTCCTTCTTATACTTGT
TGATCTGAGAGAAGTGAGCGCTGATATTTATGGGTATCTGGACAGTGGAC
GATATGGCGAGACGGTTGGATGAGTTAGAGGCTTCGTTTACGGTTGTGGA
TGGGACGACGACGTCCGGGGCTGGTGGTGGTGGTGCTTCTGCGTCGCAGA
CGGGGACGGGGTCGGTGGTGGGGAGTGCGGCTGGGAGTGGGAGTCCTGAG
AAGTGATTGATCAAATGATTGAGAGTTAATCTTGTGGGATTTGCTTGGGG
TTATGGTGTTATCGGACTTGGGTTTCTGTTCATATTTGGGGTGGTTTCCT
CTTTCGTTGTCTATGAATTAGGGGGTGATGGTGATATATACTGCTGAGTT
GTGGTGATTTGAGGTGGAATGTGAAGATACGCTTTTTACTGTCAATTTAC
ATCTACTATATACTCTTATGTTCTTGTGTATACATACATGGGAATGGGAA
ATGGATGGTTTACTGTTCGCATC back to topCoding sequence (CDS) from alignment at ch8:416605..417477- >KJC3_011370-T1 ID=KJC3_011370-T1|Name=KJC3_011370-T1|organism=Aspergillus niger KJC3|type=CDS|length=945bp|location=Sequence derived from alignment at ch8:416605..417477- (Aspergillus niger KJC3)
TGGACGATATGGCGAGACGGTTGGATGAGTTAGAGGCTTCGTTTACGGTT
GTGGATGGGACGACGACGTCCGGGGCTGGTGGTGGTGGTGCTTCTGCGTC
GCAGACGGGGACGGGGTCGGTGGTGGGGAGTGCGGCTGGGAGTGGGAGTC
CTGAGAAGTGAAACTCCGACGCGCAAGGCCAATTCTCCGCCGCAGTGGAC
GATCTTCTCGACCAGCTACAACATAAATTCGATGGTGTTTCGCGGGAGAT
GTTTGGGAAGTATGTCCGAATCCACCGCCGAAGCCGTCCCTCCCCCACCA
ACAACCTCAACTCAATGGACGATATGGCGAGACGGTTGGATGAGTTAGAG
GCTTCGTTTACGGTTGTGGATGGGACGACGACGTCCGGGGCTGGTGGTGG
TGGTGCTTCTGCGTCGCAGACGGGGACGGGGTCGGTGGTGGGGAGTGCGG
CTGGGAGTGGGAGTCCTGAGAAGTGAAACTCCGACGCGCAAGGCCAATTC
TCCGCCGCAGTGGACGATCTTCTCGACCAGCTACAACATAAATTCGATGG
TGTTTCGCGGGAGATGTTTGGGAAGTATGTCCGAATCCACCGCCGAAGCC
GTCCCTCCCCCACCAACAACCTCAACTCAATGGACGATATGGCGAGACGG
TTGGATGAGTTAGAGGCTTCGTTTACGGTTGTGGATGGGACGACGACGTC
CGGGGCTGGTGGTGGTGGTGCTTCTGCGTCGCAGACGGGGACGGGGTCGG
TGGTGGGGAGTGCGGCTGGGAGTGGGAGTCCTGAGAAGTGAAACTCCGAC
GCGCAAGGCCAATTCTCCGCCGCAGTGGACGATCTTCTCGACCAGCTACA
ACATAAATTCGATGGTGTTTCGCGGGAGATGTTTGGGAAGTATGTCCGAA
TCCACCGCCGAAGCCGTCCCTCCCCCACCAACAACCTCAACTCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003714 | transcription corepressor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011370-T1.utr3p1 | KJC3_011370-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011370-T1.utr5p1 | KJC3_011370-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009643 |
| DBxref | PFAM:PF06825 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:416605..417477 - |
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