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KJC3_011375-T1, KJC3_011375-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011375-T1
Unique NameKJC3_011375-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:435188..437453-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011375-T1 ID=KJC3_011375-T1|Name=KJC3_011375-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2266bp|location=Sequence derived from alignment at ch8:435188..437453- (Aspergillus niger KJC3)
CAGCCCGCGGAAAGCTTCACTCTCGCTCACTCCTCCTCCCTCTCTTGTTT
CTACGTCTACCCATCCCTCGCTGGTCGGACACCATTCGAACTGCACCCTT
CCCCCCGCTAACAACCATTCACTCCGATCCGAATCTGCAGGATTCCCGAC
AGGAACTCCCGCCAAACATCCGACTTCGCCTCACCTGGGCATCGCGCGAC
CTCTACATCCAATAGCTCCTGTATCCCATTCAGACTCTCGCGGGAAGGGT
CTCTGGAAGAAAACCTCTAGTTCTTCCCTTCTAAATTTTACGAGCGATTG
ATCCAGACACCTCTTTCAAAATGCCTGACGTGAGTTCCGCCTCCCTCTCC
GGGTTCAGCAATGGCACCCTCTCCCACTGGCGCTCGACGCGAACAAATTC
GGTCTTCTTTCACTCGATCGCATGACGCTGACGTGACGCTTTTTCTCTAC
TTCTACAGGTTAAAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTG
TACGTTGTATCCTACTAAATACTCCCGGTTCCCGAGTCATTCCTGAATGA
ATCACCGCCGCTTCTCTTCCTCGTCATCGCTGCCTATCCTTCTCCACCTT
CTTCTCGCATCCGTCGTTGGTCATCGCGCGATGGTTGTTCGCTGTGCGCT
TGGGCTCCCAACACGGTTACCTCTGCAGAGAATGGCACAAGGGCAGAAGC
TTGGAATGAGAAAGTCCTCCTTGCTGACCTAGTGCGCGTCTTCGCGTCTA
CAGGAACAAAGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAA
TTGAGATCTACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTC
TTCGATAAAGTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCAT
TCAGAGTACGTCACACCCTCTGCTCTTCGCACACCCCCGATCAGCGTCCG
GCCAGTGGGAACCGGACGACAGAGATGGTCGACTTTACAAGGGATAGGTG
AAATGGGTCACTAGCGGCTGCTGACCTCAGAATAGCCTTCAAGAATCCCC
CCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGATATGCAAATAGGA
CTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACGACCTGAACTTTGC
TCAGCCCCGTTACGAATCCAAGCACGTCATTGTGAGTAATTGGCCCTCGG
TGGAACACCATTGATTGTGCTAATTTTCTCTCTCCCGTATAGACGTTCAA
GAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCGAATCCGGACCCGTCC
CAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCCGCAGCCGGAGAGGAG
GGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTGTAAGCGACGACTCATT
CTCCTCAGAGAAGAAGAAAATAACAATAGAAACACCTCTGACATGATCAC
TATCCCAGGTTGACATGGACAAGCTGGCCGACGGTCTGCAGCGACTCGGC
GAAGATGACCTCCTCCAGGTAGTACAGATGGTGCACGACAACAAAGCCCC
AGACTCGTATACCAAGAACGATGTTGAGCGTAAGCTACCACCACCGCCGC
CCCTCGAAATTCCCATCCCACTAACCAATTCAATCCATAACAGAGGGAGA
ATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATGCTGT
GGGATTTCACGCAGGAGAAAGGCGCTTTGTGAAAAAAACAACTACTAGTT
ACCCCATATTTTTCCTTTTCAAACCTCCTTTTGGGCGAAACAATTGCTAT
TTTGTTGTATCTCTCTCTGGCTTGTCTTTTTTTTTTTCCTCCCTCCAACC
CACCCCTTATTCCACTCAAAGTTTCTAACTACTTACTACGGAGTACTTTA
CCTACTTTACTACATTTCGCATCTATGAACACTAGGAATTGTGTCTATCT
TTGCTTACTAGTTACTTTACTCTCCTTTACTGCTTACTTTCTACCTACTT
GTTTATCTGTCTATTAATCTCTCTACTAGCATCACCCGCGTTGTATCTTT
TATTGGATGTGTGCTTTTCCATGAAAAGAAAACAGGAAGAAAGAACAAGA
ATTGGATAGGCTAAATGGACGGATATGGGTAATAATGATCGTGCGATAAG
TAGCGCGGAACAGAGAGAGAGAAAAAGAGAAGGGGGTGGGAAAGGGTAGT
ATCAAACTGAAAACCATTTTGCATTGTATTGTGAGTAAAGACGATAATGA
AGTTTTATAGCATTGC
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Coding sequence (CDS) from alignment at ch8:435188..437453-

>KJC3_011375-T1 ID=KJC3_011375-T1|Name=KJC3_011375-T1|organism=Aspergillus niger KJC3|type=CDS|length=4893bp|location=Sequence derived from alignment at ch8:435188..437453- (Aspergillus niger KJC3)
AGGGAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAG
ATGCTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGA
CAAGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGG
TAGTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAAC
GATGTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCC
GCGAATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGC
GCCGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAG
TCCTTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTT
CGATATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGC
ACGACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAA
CAAAGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGA
TCTACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGAT
AAAGTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAG
TTAAAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACA
GGGAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGA
TGCTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGAC
AAGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGT
AGTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACG
ATGTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCG
CGAATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCG
CCGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGT
CCTTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTC
GATATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCA
CGACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAAC
AAAGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGAT
CTACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATA
AAGTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGT
TAAAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAG
GGAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGAT
GCTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACA
AGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTA
GTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGA
TGTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGC
GAATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGC
CGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTC
CTTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCG
ATATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCAC
GACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACA
AAGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATC
TACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAA
AGTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTT
AAAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGG
GAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATG
CTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAA
GCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAG
TACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGAT
GTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCG
AATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCC
GCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCC
TTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGA
TATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACG
ACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAA
AGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCT
ACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAA
GTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTA
AAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGGG
AGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATGC
TGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAAG
CTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAGT
ACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGATG
TTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCGA
ATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCCG
CAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCCT
TCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGAT
ATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACGA
CCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAAA
GACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTA
CGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAG
TGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTAA
AAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGGGA
GAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATGCT
GTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAAGC
TGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAGTA
CAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGATGT
TGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCGAA
TCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCCGC
AGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCCTT
CAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGATA
TGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACGAC
CTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAAAG
ACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTAC
GTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAGT
GACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTAAA
AGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGGGAG
AATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATGCTG
TGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAAGCT
GGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAGTAC
AGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGATGTT
GAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCGAAT
CCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCCGCA
GCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCCTTC
AAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGATAT
GCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACGACC
TGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAAAGA
CTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTACG
TTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAGTG
ACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTAAAA
GAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011375KJC3_011375Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011375-T1KJC3_011375-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011375-T1.cdsKJC3_011375-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011375-T1.utr3p1KJC3_011375-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011375-T1.exon7KJC3_011375-T1.exon7Aspergillus niger KJC3exon
KJC3_011375-T1.exon6KJC3_011375-T1.exon6Aspergillus niger KJC3exon
KJC3_011375-T1.exon5KJC3_011375-T1.exon5Aspergillus niger KJC3exon
KJC3_011375-T1.exon4KJC3_011375-T1.exon4Aspergillus niger KJC3exon
KJC3_011375-T1.exon3KJC3_011375-T1.exon3Aspergillus niger KJC3exon
KJC3_011375-T1.exon2KJC3_011375-T1.exon2Aspergillus niger KJC3exon
KJC3_011375-T1.exon1KJC3_011375-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011375-T1.utr5p1KJC3_011375-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038704
DBxrefInterPro:IPR005033
DBxrefInterPro:IPR016665
DBxrefPFAM:PF03366
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:435188..437453 -
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