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KJC3_011382-T1, KJC3_011382-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011382-T1
Unique NameKJC3_011382-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:455427..456565+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011382-T1 ID=KJC3_011382-T1|Name=KJC3_011382-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1139bp|location=Sequence derived from alignment at ch8:455427..456565+ (Aspergillus niger KJC3)
GGTGGTTGATGTCGCCGTGGTATAACTTGCTTGGTCCCTTAGAAACATAG
CGGGCTTTTGTGTCATTAAACCATACGTCTCTACCTCGGCGACTCTGAGC
ATCACCATGGCTCCATGATATGAGGGGTCCGCCGTCCGTCCGCTAGATAG
ACTCACCTTATCATCACTGCTATCAAATGGCCCACTGGAAAGAGGAGTAC
TCCGCCGCGCTGGCGGCTCGTGATCGACGAGAGAAAGCCAGCATAGCTAT
CTACGATGCTTGTATGTCGATCACCCTCACTTTCTGGGGTAGTTCACATT
CCCGGAAGTATTCTGACCCTTCTCTGACTATTATGACCAAAATCATTAGA
TACCCAACTGGCCGATCGCACGGTTCACATAGGAGCAACGGCTAGCAACC
CACAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACCCGACACTTCA
GCATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCACAAGACCCATC
TTTACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCAGAGGCACAGC
GGTCACGCTCCGAACTGCAGGACCAGCTCACACGCATGACCACTGACCTA
GAGAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGATCCGCTTATT
CGAAACCGAGATTGCTCATCTTCAACTACGTTTGAAGGATCGAGATGAAG
AGTTGCGTGGGAAGGCAAAGCTACTGGAGGTTTGCTGCTCCGTTACCTCC
TTTTGTGACTCCTTCTGCTGTTGCTGACACCACTTTAGGATTTCCAAGAC
GAGCTGGCATCGTTGAATCTTCAACTGAATATGGCTGAAGAACGGTCATC
CCGACTGCAGAAAGAGAACCAAGATCTCGTTGATCGCTGGATGGCTAGAA
TGGGTAGGGAAGCAGAAGCCATGAACGCTGCCTCTGAGTTCTCATAGAGA
CGGCTACACGACGAACCGACAGGACCGTGATTTCCCCCGCCTGGTACGGG
ATGGCCTAACGATATATAAGACTTTCGTAGAATACATATTATATCCGAAT
GATGCTGTGTCTGTCAGAGGCACACGAGCAGAAGCTATGATTCTCAAGAA
ATGCCATTATTTACTATGTTCTATCATCTAACAAATATC
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Coding sequence (CDS) from alignment at ch8:455427..456565+

>KJC3_011382-T1 ID=KJC3_011382-T1|Name=KJC3_011382-T1|organism=Aspergillus niger KJC3|type=CDS|length=1872bp|location=Sequence derived from alignment at ch8:455427..456565+ (Aspergillus niger KJC3)
ATGGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCG
ACGAGAGAAAGCCAGCATAGCTATCTACGATGCTTATACCCAACTGGCCG
ATCGCACGGTTCACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGAT
CCGGTTGAAGCGCAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAG
CAAAACGCCGACAGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTC
TCCTAGCAACACGTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAA
CTGCAGGACCAGCTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAA
GAGAAGCACTCAGGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTG
CTCATCTTCAACTACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAG
GCAAAGCTACTGGAGGATTTCCAAGACGAGCTGGCATCGTTGAATCTTCA
ACTGAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCAAG
ATCTCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATG
AACGCTGCCTCTGAGTTCTCATAGATGGCCCACTGGAAAGAGGAGTACTC
CGCCGCGCTGGCGGCTCGTGATCGACGAGAGAAAGCCAGCATAGCTATCT
ACGATGCTTATACCCAACTGGCCGATCGCACGGTTCACATAGGAGCAACG
GCTAGCAACCCACAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACC
CGACACTTCAGCATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCAC
AAGACCCATCTTTACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCA
GAGGCACAGCGGTCACGCTCCGAACTGCAGGACCAGCTCACACGCATGAC
CACTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGA
TCCGCTTATTCGAAACCGAGATTGCTCATCTTCAACTACGTTTGAAGGAT
CGAGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTGGAGGATTTCCAAGA
CGAGCTGGCATCGTTGAATCTTCAACTGAATATGGCTGAAGAACGGTCAT
CCCGACTGCAGAAAGAGAACCAAGATCTCGTTGATCGCTGGATGGCTAGA
ATGGGTAGGGAAGCAGAAGCCATGAACGCTGCCTCTGAGTTCTCATAGAT
GGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCGAC
GAGAGAAAGCCAGCATAGCTATCTACGATGCTTATACCCAACTGGCCGAT
CGCACGGTTCACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGATCC
GGTTGAAGCGCAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAGCA
AAACGCCGACAGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTCTC
CTAGCAACACGTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAACT
GCAGGACCAGCTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAAGA
GAAGCACTCAGGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTGCT
CATCTTCAACTACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAGGC
AAAGCTACTGGAGGATTTCCAAGACGAGCTGGCATCGTTGAATCTTCAAC
TGAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCAAGAT
CTCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAA
CGCTGCCTCTGAGTTCTCATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG16KJC3_011382Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011382-T1KJC3_011382-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011382-T1.utr5p1KJC3_011382-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011382-T1.exon1KJC3_011382-T1.exon1Aspergillus niger KJC3exon
KJC3_011382-T1.exon2KJC3_011382-T1.exon2Aspergillus niger KJC3exon
KJC3_011382-T1.exon3KJC3_011382-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011382-T1.cdsKJC3_011382-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011382-T1.utr3p1KJC3_011382-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013923
DBxrefPFAM:PF08614
Product interacts with Atg12p-Atg5p
Productautophagy protein 16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:455427..456565 +
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