|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:456573..459717- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011383-T1 ID=KJC3_011383-T1|Name=KJC3_011383-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3145bp|location=Sequence derived from alignment at ch8:456573..459717- (Aspergillus niger KJC3)
GGAAGGGGAAATTTTTATTTTTCGGGGCCGATGTGGAGAAGGCCAGGAAA
GGATCCATCCAGGCCGCCGATAACTTTTTTTCCTGGATACATTCTCTTGT
ACCGCTCTCACCATTCCTACCCACTTGCATCCGCACTTCTTTGCTTAGCG
GTTTCGGTTTTTCGTCGAGTGTGCCTCGACCTCCCATCTCTCAAGATGGC
GATTCAGAAGAAGGTAATGCGGCATTGGTCTGGCTCGCGGCAATAGAAAA
CCCAGTACTGACAATGACTTAGCATGGTAAAGGTCGTTTGGATAAGTGGT
ATCGCCTGGCGAAGGAGAAGGGATACAGAGCGAGAGCTGCTTTCAAGCTG
ATCCAGCTGAACAAGAAGTATGGCTTTCTGGAGAAGAGCAAAGTCGTTCT
CGATCTTTGCGCGGCACCCGGTGTGAGTACAACCCCTCAGTTTGATTTCT
AACGCCTGGTCTGGTGGCTGACCATTCTCGCAACACAGTCGTGGTGTCAA
GTTGCTGCGGAATGCATGCCCGCACAGAGTATCATCGTCGGTGTCGATCT
TGCGCCTATTAAGCCGATTCCCCGAGTCATTACCTTCCAGAGCGATATCA
CGACCGAGAAGTGTCGCACAACAATCAGACAGCACCTGAAGCACTGGAAG
GCTGATACCGTTCTTCACGATGGTGCCCCCAATGTCGGTACCGCATGGGT
TCAGGATGCTTTCTCTCAGGCAGAGCTGGTGTTGCAGTCTTTGAAGTTGG
CTACGGAGTTCTTGGCGGAAGGCGGTACATTCGTTACGAAGGTCTTCAGA
TCCAAGGACTACAATCCGCTTTTGTGGGTTTTCAAGCAACTTTTTGCATC
CGTGGAGGCAACGAAACCCCCGTCTTCTCGAAATGTTTCCGCAGAAATCT
TCGTTGTTTGTCGGAATTACAAGGCACCAAAGCGCATTGATCCGAAGTTC
CTCGATCCTAAGCACGTCTTCGCAGAACTTGCGGACCCTACCCCCAACAA
TGAGGCTAAGGTGTTCAACCCGGAGAAGAAGAAGCGCAAGAGAGAGGGTT
ACGAAGAGGGCGATTATACGCAATTCAAGGAGATCCCAGTTACCGAGTTC
ATCAACACCACTGATCCGATTGCCATCCTGGGTTCATACAACAAACTCAG
TTTTCAACAGTCACCAAGTGGCGACCTTGCTCTCGCCACACTGGAGAGAC
TGGAAGATACGACCGACGAGATCAAAGCCTGCTGTGAGGATCTCAAGGTT
CTGGGTAAGAAGGAGTTCCGAAACCTGCTCAGGTGGCGACTGAAAGTGCG
GGAGAAGTTTGGTCTCGCTGTGAAGAAGGGGGCCCAAACCAAGGAGGATG
AGACTGAAGAAGTGGCGGAGGTCGCTCCCATGGATGATGAGCTGGCCATT
CAAGAGGAGTTGATGCGCCTTCGTGAGAAGGAAACCTCAAAGCAAAAGAA
AGAGCGCCGCAAGGAGAACGAGAGGAAGCGCAAGGAAATCGTCCGGTTAC
AGATGCACATGACGACCCCCATGGATATCGGAAAGGAGCAACTGGGACCT
AATGGCGAGGATGCTACATTCTCGCTCAAGCGCGCCGAGAGAGGCGGAGT
TAGGGACACCATTGCCGCCGGCCATGAAGCGTCGATTGAAAGTGATAGCG
AGGACAGTGCTTCCGAGTCTGAGACCGAGGAGAGCGATGACGAGGAAGAC
CGTCTGGAGCGGGAACTTGACAACCTGTACGAGCAATACCAGGACCGCAA
GGAAGACCGGGACACGAAGTTACGGGCAAAGAAGGCCAGGAAGGACTTCG
AAGCCGACTCCTGGGACGGCTTTTCCGATTCTGACAAGGAAGAAGGTGAA
GACTCCGATGATGAGGGTCTTGGAGTTAGCTCTGCCGTCGACAAAGCTCC
CAAGTCAGCTTCCCTTTCCAACAGTGCCTCGCTATTCTTCGACCAAGATA
TATTCCAAGGCCTAGAAGACATTGACGATGTGGAGGACGAAGATGAGGAA
GTGGAGGATGAAGATAGCGCCATCGAAGTTAAGGAGGATCGGCCTAAGGG
CAAGGAGTCTGAAAAGAAAAAGGCAAAGGAATCGAAGAAACCTGTGCAGG
CGATGGAAGACTCGGACGAAGAAGATCTTGAAGAGCTTGAGGATCCACGG
AAAAAGAATGGACAGCTCGGTAAGTTCGCAGAATGCGGCATATCATTGCA
TTGTACCCTGGATAACTAATGCTGACTCTACTATGTAGATATCGATATCA
TCACTGCGGAAGCCATGGCACTCGCTCAGCAGATGGCCACTGGAGAGAAG
AAGTCTCATGATGTGGTTGATGATGGCTTTAACCGATTTGCTTTCCGTGA
TAGTGATGGTCTCCCCGAGTGGTTCCTTGACGACGAGAACAAGCACAGTG
TCCAGAACCGTCCTATCACCAAGGCGGCCGCAGCCGCAATCAAGGAGAAG
ATGCGCGCCATCAACGCTCGGCCCATCAAGAAGGTTATGGAAGCCAAGGG
CCGCAAGAAGATGAAGGCCGCCCAGCGACTGGAGAAACTGCGCAAGAAGT
CTGCACTTTTGGCAGATGACGAAGCTCTCAGCGAGCGTGATAAGTCGCAG
GCCATTGCGAGGTTGATGAGCAGGGCTACCAAGAAGAAGCCCAAGCAGCA
GGTGAAGTTGGTGGTTGCCAAGGGAAACAACAGGGGTATTTCTGGACGTC
CTCGTGGTGTCAAGGGCAAGTACAAGATTGTGGATTCTCGTATGAAGAAG
GATATCCGGGCTCAGAAGCGCCTTGCCAAGAAGAAGAAGAATTAGTGATG
GGGCTTAGTTGTGGAACTCGAAGCGATCTTTTTCATCATTGTCCATGTAT
ATACCCGGTTAACATTATAGATCTCTGTATCATATCCATGGTGAAAGGGG
TACTACCTGTTATGGCAGACTGTAATGCGTTTCGATGGCCCGATGTGGTG
CGGGATGGGTGGCCCTGGAGTCCTCTCTATTCTCTATTCTCCTAGATGAA
GGTATGGCTTAGGACATGGATCTGTTTTCTCATTCAGGAATGCATATCAG
CATATGGCAACACCGATCACACTGGCCAATATTCTGCTTATGACTACAGT
ACTAGTAGTGATACTATTCGCCTCTAAACTTAAGATGTAACACAG back to topCoding sequence (CDS) from alignment at ch8:456573..459717- >KJC3_011383-T1 ID=KJC3_011383-T1|Name=KJC3_011383-T1|organism=Aspergillus niger KJC3|type=CDS|length=10284bp|location=Sequence derived from alignment at ch8:456573..459717- (Aspergillus niger KJC3)
ATATCGATATCATCACTGCGGAAGCCATGGCACTCGCTCAGCAGATGGCC
ACTGGAGAGAAGAAGTCTCATGATGTGGTTGATGATGGCTTTAACCGATT
TGCTTTCCGTGATAGTGATGGTCTCCCCGAGTGGTTCCTTGACGACGAGA
ACAAGCACAGTGTCCAGAACCGTCCTATCACCAAGGCGGCCGCAGCCGCA
ATCAAGGAGAAGATGCGCGCCATCAACGCTCGGCCCATCAAGAAGGTTAT
GGAAGCCAAGGGCCGCAAGAAGATGAAGGCCGCCCAGCGACTGGAGAAAC
TGCGCAAGAAGTCTGCACTTTTGGCAGATGACGAAGCTCTCAGCGAGCGT
GATAAGTCGCAGGCCATTGCGAGGTTGATGAGCAGGGCTACCAAGAAGAA
GCCCAAGCAGCAGGTGAAGTTGGTGGTTGCCAAGGGAAACAACAGGGGTA
TTTCTGGACGTCCTCGTGGTGTCAAGGGCAAGTACAAGATTGTGGATTCT
CGTATGAAGAAGGATATCCGGGCTCAGAAGCGCCTTGCCAAGAAGAAGAA
GAATTAGTCGTGGTGTCAAGTTGCTGCGGAATGCATGCCCGCACAGAGTA
TCATCGTCGGTGTCGATCTTGCGCCTATTAAGCCGATTCCCCGAGTCATT
ACCTTCCAGAGCGATATCACGACCGAGAAGTGTCGCACAACAATCAGACA
GCACCTGAAGCACTGGAAGGCTGATACCGTTCTTCACGATGGTGCCCCCA
ATGTCGGTACCGCATGGGTTCAGGATGCTTTCTCTCAGGCAGAGCTGGTG
TTGCAGTCTTTGAAGTTGGCTACGGAGTTCTTGGCGGAAGGCGGTACATT
CGTTACGAAGGTCTTCAGATCCAAGGACTACAATCCGCTTTTGTGGGTTT
TCAAGCAACTTTTTGCATCCGTGGAGGCAACGAAACCCCCGTCTTCTCGA
AATGTTTCCGCAGAAATCTTCGTTGTTTGTCGGAATTACAAGGCACCAAA
GCGCATTGATCCGAAGTTCCTCGATCCTAAGCACGTCTTCGCAGAACTTG
CGGACCCTACCCCCAACAATGAGGCTAAGGTGTTCAACCCGGAGAAGAAG
AAGCGCAAGAGAGAGGGTTACGAAGAGGGCGATTATACGCAATTCAAGGA
GATCCCAGTTACCGAGTTCATCAACACCACTGATCCGATTGCCATCCTGG
GTTCATACAACAAACTCAGTTTTCAACAGTCACCAAGTGGCGACCTTGCT
CTCGCCACACTGGAGAGACTGGAAGATACGACCGACGAGATCAAAGCCTG
CTGTGAGGATCTCAAGGTTCTGGGTAAGAAGGAGTTCCGAAACCTGCTCA
GGTGGCGACTGAAAGTGCGGGAGAAGTTTGGTCTCGCTGTGAAGAAGGGG
GCCCAAACCAAGGAGGATGAGACTGAAGAAGTGGCGGAGGTCGCTCCCAT
GGATGATGAGCTGGCCATTCAAGAGGAGTTGATGCGCCTTCGTGAGAAGG
AAACCTCAAAGCAAAAGAAAGAGCGCCGCAAGGAGAACGAGAGGAAGCGC
AAGGAAATCGTCCGGTTACAGATGCACATGACGACCCCCATGGATATCGG
AAAGGAGCAACTGGGACCTAATGGCGAGGATGCTACATTCTCGCTCAAGC
GCGCCGAGAGAGGCGGAGTTAGGGACACCATTGCCGCCGGCCATGAAGCG
TCGATTGAAAGTGATAGCGAGGACAGTGCTTCCGAGTCTGAGACCGAGGA
GAGCGATGACGAGGAAGACCGTCTGGAGCGGGAACTTGACAACCTGTACG
AGCAATACCAGGACCGCAAGGAAGACCGGGACACGAAGTTACGGGCAAAG
AAGGCCAGGAAGGACTTCGAAGCCGACTCCTGGGACGGCTTTTCCGATTC
TGACAAGGAAGAAGGTGAAGACTCCGATGATGAGGGTCTTGGAGTTAGCT
CTGCCGTCGACAAAGCTCCCAAGTCAGCTTCCCTTTCCAACAGTGCCTCG
CTATTCTTCGACCAAGATATATTCCAAGGCCTAGAAGACATTGACGATGT
GGAGGACGAAGATGAGGAAGTGGAGGATGAAGATAGCGCCATCGAAGTTA
AGGAGGATCGGCCTAAGGGCAAGGAGTCTGAAAAGAAAAAGGCAAAGGAA
TCGAAGAAACCTGTGCAGGCGATGGAAGACTCGGACGAAGAAGATCTTGA
AGAGCTTGAGGATCCACGGAAAAAGAATGGACAGCTCGCATGGTAAAGGT
CGTTTGGATAAGTGGTATCGCCTGGCGAAGGAGAAGGGATACAGAGCGAG
AGCTGCTTTCAAGCTGATCCAGCTGAACAAGAAGTATGGCTTTCTGGAGA
AGAGCAAAGTCGTTCTCGATCTTTGCGCGGCACCCGGTATGTGGAGAAGG
CCAGGAAAGGATCCATCCAGGCCGCCGATAACTTTTTTTCCTGGATACAT
TCTCTTGTACCGCTCTCACCATTCCTACCCACTTGCATCCGCACTTCTTT
GCTTAGCGGTTTCGGTTTTTCGTCGAGTGTGCCTCGACCTCCCATCTCTC
AAGATGGCGATTCAGAAGAAGATATCGATATCATCACTGCGGAAGCCATG
GCACTCGCTCAGCAGATGGCCACTGGAGAGAAGAAGTCTCATGATGTGGT
TGATGATGGCTTTAACCGATTTGCTTTCCGTGATAGTGATGGTCTCCCCG
AGTGGTTCCTTGACGACGAGAACAAGCACAGTGTCCAGAACCGTCCTATC
ACCAAGGCGGCCGCAGCCGCAATCAAGGAGAAGATGCGCGCCATCAACGC
TCGGCCCATCAAGAAGGTTATGGAAGCCAAGGGCCGCAAGAAGATGAAGG
CCGCCCAGCGACTGGAGAAACTGCGCAAGAAGTCTGCACTTTTGGCAGAT
GACGAAGCTCTCAGCGAGCGTGATAAGTCGCAGGCCATTGCGAGGTTGAT
GAGCAGGGCTACCAAGAAGAAGCCCAAGCAGCAGGTGAAGTTGGTGGTTG
CCAAGGGAAACAACAGGGGTATTTCTGGACGTCCTCGTGGTGTCAAGGGC
AAGTACAAGATTGTGGATTCTCGTATGAAGAAGGATATCCGGGCTCAGAA
GCGCCTTGCCAAGAAGAAGAAGAATTAGTCGTGGTGTCAAGTTGCTGCGG
AATGCATGCCCGCACAGAGTATCATCGTCGGTGTCGATCTTGCGCCTATT
AAGCCGATTCCCCGAGTCATTACCTTCCAGAGCGATATCACGACCGAGAA
GTGTCGCACAACAATCAGACAGCACCTGAAGCACTGGAAGGCTGATACCG
TTCTTCACGATGGTGCCCCCAATGTCGGTACCGCATGGGTTCAGGATGCT
TTCTCTCAGGCAGAGCTGGTGTTGCAGTCTTTGAAGTTGGCTACGGAGTT
CTTGGCGGAAGGCGGTACATTCGTTACGAAGGTCTTCAGATCCAAGGACT
ACAATCCGCTTTTGTGGGTTTTCAAGCAACTTTTTGCATCCGTGGAGGCA
ACGAAACCCCCGTCTTCTCGAAATGTTTCCGCAGAAATCTTCGTTGTTTG
TCGGAATTACAAGGCACCAAAGCGCATTGATCCGAAGTTCCTCGATCCTA
AGCACGTCTTCGCAGAACTTGCGGACCCTACCCCCAACAATGAGGCTAAG
GTGTTCAACCCGGAGAAGAAGAAGCGCAAGAGAGAGGGTTACGAAGAGGG
CGATTATACGCAATTCAAGGAGATCCCAGTTACCGAGTTCATCAACACCA
CTGATCCGATTGCCATCCTGGGTTCATACAACAAACTCAGTTTTCAACAG
TCACCAAGTGGCGACCTTGCTCTCGCCACACTGGAGAGACTGGAAGATAC
GACCGACGAGATCAAAGCCTGCTGTGAGGATCTCAAGGTTCTGGGTAAGA
AGGAGTTCCGAAACCTGCTCAGGTGGCGACTGAAAGTGCGGGAGAAGTTT
GGTCTCGCTGTGAAGAAGGGGGCCCAAACCAAGGAGGATGAGACTGAAGA
AGTGGCGGAGGTCGCTCCCATGGATGATGAGCTGGCCATTCAAGAGGAGT
TGATGCGCCTTCGTGAGAAGGAAACCTCAAAGCAAAAGAAAGAGCGCCGC
AAGGAGAACGAGAGGAAGCGCAAGGAAATCGTCCGGTTACAGATGCACAT
GACGACCCCCATGGATATCGGAAAGGAGCAACTGGGACCTAATGGCGAGG
ATGCTACATTCTCGCTCAAGCGCGCCGAGAGAGGCGGAGTTAGGGACACC
ATTGCCGCCGGCCATGAAGCGTCGATTGAAAGTGATAGCGAGGACAGTGC
TTCCGAGTCTGAGACCGAGGAGAGCGATGACGAGGAAGACCGTCTGGAGC
GGGAACTTGACAACCTGTACGAGCAATACCAGGACCGCAAGGAAGACCGG
GACACGAAGTTACGGGCAAAGAAGGCCAGGAAGGACTTCGAAGCCGACTC
CTGGGACGGCTTTTCCGATTCTGACAAGGAAGAAGGTGAAGACTCCGATG
ATGAGGGTCTTGGAGTTAGCTCTGCCGTCGACAAAGCTCCCAAGTCAGCT
TCCCTTTCCAACAGTGCCTCGCTATTCTTCGACCAAGATATATTCCAAGG
CCTAGAAGACATTGACGATGTGGAGGACGAAGATGAGGAAGTGGAGGATG
AAGATAGCGCCATCGAAGTTAAGGAGGATCGGCCTAAGGGCAAGGAGTCT
GAAAAGAAAAAGGCAAAGGAATCGAAGAAACCTGTGCAGGCGATGGAAGA
CTCGGACGAAGAAGATCTTGAAGAGCTTGAGGATCCACGGAAAAAGAATG
GACAGCTCGCATGGTAAAGGTCGTTTGGATAAGTGGTATCGCCTGGCGAA
GGAGAAGGGATACAGAGCGAGAGCTGCTTTCAAGCTGATCCAGCTGAACA
AGAAGTATGGCTTTCTGGAGAAGAGCAAAGTCGTTCTCGATCTTTGCGCG
GCACCCGGTATGTGGAGAAGGCCAGGAAAGGATCCATCCAGGCCGCCGAT
AACTTTTTTTCCTGGATACATTCTCTTGTACCGCTCTCACCATTCCTACC
CACTTGCATCCGCACTTCTTTGCTTAGCGGTTTCGGTTTTTCGTCGAGTG
TGCCTCGACCTCCCATCTCTCAAGATGGCGATTCAGAAGAAGATATCGAT
ATCATCACTGCGGAAGCCATGGCACTCGCTCAGCAGATGGCCACTGGAGA
GAAGAAGTCTCATGATGTGGTTGATGATGGCTTTAACCGATTTGCTTTCC
GTGATAGTGATGGTCTCCCCGAGTGGTTCCTTGACGACGAGAACAAGCAC
AGTGTCCAGAACCGTCCTATCACCAAGGCGGCCGCAGCCGCAATCAAGGA
GAAGATGCGCGCCATCAACGCTCGGCCCATCAAGAAGGTTATGGAAGCCA
AGGGCCGCAAGAAGATGAAGGCCGCCCAGCGACTGGAGAAACTGCGCAAG
AAGTCTGCACTTTTGGCAGATGACGAAGCTCTCAGCGAGCGTGATAAGTC
GCAGGCCATTGCGAGGTTGATGAGCAGGGCTACCAAGAAGAAGCCCAAGC
AGCAGGTGAAGTTGGTGGTTGCCAAGGGAAACAACAGGGGTATTTCTGGA
CGTCCTCGTGGTGTCAAGGGCAAGTACAAGATTGTGGATTCTCGTATGAA
GAAGGATATCCGGGCTCAGAAGCGCCTTGCCAAGAAGAAGAAGAATTAGT
CGTGGTGTCAAGTTGCTGCGGAATGCATGCCCGCACAGAGTATCATCGTC
GGTGTCGATCTTGCGCCTATTAAGCCGATTCCCCGAGTCATTACCTTCCA
GAGCGATATCACGACCGAGAAGTGTCGCACAACAATCAGACAGCACCTGA
AGCACTGGAAGGCTGATACCGTTCTTCACGATGGTGCCCCCAATGTCGGT
ACCGCATGGGTTCAGGATGCTTTCTCTCAGGCAGAGCTGGTGTTGCAGTC
TTTGAAGTTGGCTACGGAGTTCTTGGCGGAAGGCGGTACATTCGTTACGA
AGGTCTTCAGATCCAAGGACTACAATCCGCTTTTGTGGGTTTTCAAGCAA
CTTTTTGCATCCGTGGAGGCAACGAAACCCCCGTCTTCTCGAAATGTTTC
CGCAGAAATCTTCGTTGTTTGTCGGAATTACAAGGCACCAAAGCGCATTG
ATCCGAAGTTCCTCGATCCTAAGCACGTCTTCGCAGAACTTGCGGACCCT
ACCCCCAACAATGAGGCTAAGGTGTTCAACCCGGAGAAGAAGAAGCGCAA
GAGAGAGGGTTACGAAGAGGGCGATTATACGCAATTCAAGGAGATCCCAG
TTACCGAGTTCATCAACACCACTGATCCGATTGCCATCCTGGGTTCATAC
AACAAACTCAGTTTTCAACAGTCACCAAGTGGCGACCTTGCTCTCGCCAC
ACTGGAGAGACTGGAAGATACGACCGACGAGATCAAAGCCTGCTGTGAGG
ATCTCAAGGTTCTGGGTAAGAAGGAGTTCCGAAACCTGCTCAGGTGGCGA
CTGAAAGTGCGGGAGAAGTTTGGTCTCGCTGTGAAGAAGGGGGCCCAAAC
CAAGGAGGATGAGACTGAAGAAGTGGCGGAGGTCGCTCCCATGGATGATG
AGCTGGCCATTCAAGAGGAGTTGATGCGCCTTCGTGAGAAGGAAACCTCA
AAGCAAAAGAAAGAGCGCCGCAAGGAGAACGAGAGGAAGCGCAAGGAAAT
CGTCCGGTTACAGATGCACATGACGACCCCCATGGATATCGGAAAGGAGC
AACTGGGACCTAATGGCGAGGATGCTACATTCTCGCTCAAGCGCGCCGAG
AGAGGCGGAGTTAGGGACACCATTGCCGCCGGCCATGAAGCGTCGATTGA
AAGTGATAGCGAGGACAGTGCTTCCGAGTCTGAGACCGAGGAGAGCGATG
ACGAGGAAGACCGTCTGGAGCGGGAACTTGACAACCTGTACGAGCAATAC
CAGGACCGCAAGGAAGACCGGGACACGAAGTTACGGGCAAAGAAGGCCAG
GAAGGACTTCGAAGCCGACTCCTGGGACGGCTTTTCCGATTCTGACAAGG
AAGAAGGTGAAGACTCCGATGATGAGGGTCTTGGAGTTAGCTCTGCCGTC
GACAAAGCTCCCAAGTCAGCTTCCCTTTCCAACAGTGCCTCGCTATTCTT
CGACCAAGATATATTCCAAGGCCTAGAAGACATTGACGATGTGGAGGACG
AAGATGAGGAAGTGGAGGATGAAGATAGCGCCATCGAAGTTAAGGAGGAT
CGGCCTAAGGGCAAGGAGTCTGAAAAGAAAAAGGCAAAGGAATCGAAGAA
ACCTGTGCAGGCGATGGAAGACTCGGACGAAGAAGATCTTGAAGAGCTTG
AGGATCCACGGAAAAAGAATGGACAGCTCGCATGGTAAAGGTCGTTTGGA
TAAGTGGTATCGCCTGGCGAAGGAGAAGGGATACAGAGCGAGAGCTGCTT
TCAAGCTGATCCAGCTGAACAAGAAGTATGGCTTTCTGGAGAAGAGCAAA
GTCGTTCTCGATCTTTGCGCGGCACCCGGTATGTGGAGAAGGCCAGGAAA
GGATCCATCCAGGCCGCCGATAACTTTTTTTCCTGGATACATTCTCTTGT
ACCGCTCTCACCATTCCTACCCACTTGCATCCGCACTTCTTTGCTTAGCG
GTTTCGGTTTTTCGTCGAGTGTGCCTCGACCTCCCATCTCTCAAGATGGC
GATTCAGAAGAAGATATCGATATCATCACTGCGGAAGCCATGGCACTCGC
TCAGCAGATGGCCACTGGAGAGAAGAAGTCTCATGATGTGGTTGATGATG
GCTTTAACCGATTTGCTTTCCGTGATAGTGATGGTCTCCCCGAGTGGTTC
CTTGACGACGAGAACAAGCACAGTGTCCAGAACCGTCCTATCACCAAGGC
GGCCGCAGCCGCAATCAAGGAGAAGATGCGCGCCATCAACGCTCGGCCCA
TCAAGAAGGTTATGGAAGCCAAGGGCCGCAAGAAGATGAAGGCCGCCCAG
CGACTGGAGAAACTGCGCAAGAAGTCTGCACTTTTGGCAGATGACGAAGC
TCTCAGCGAGCGTGATAAGTCGCAGGCCATTGCGAGGTTGATGAGCAGGG
CTACCAAGAAGAAGCCCAAGCAGCAGGTGAAGTTGGTGGTTGCCAAGGGA
AACAACAGGGGTATTTCTGGACGTCCTCGTGGTGTCAAGGGCAAGTACAA
GATTGTGGATTCTCGTATGAAGAAGGATATCCGGGCTCAGAAGCGCCTTG
CCAAGAAGAAGAAGAATTAGTCGTGGTGTCAAGTTGCTGCGGAATGCATG
CCCGCACAGAGTATCATCGTCGGTGTCGATCTTGCGCCTATTAAGCCGAT
TCCCCGAGTCATTACCTTCCAGAGCGATATCACGACCGAGAAGTGTCGCA
CAACAATCAGACAGCACCTGAAGCACTGGAAGGCTGATACCGTTCTTCAC
GATGGTGCCCCCAATGTCGGTACCGCATGGGTTCAGGATGCTTTCTCTCA
GGCAGAGCTGGTGTTGCAGTCTTTGAAGTTGGCTACGGAGTTCTTGGCGG
AAGGCGGTACATTCGTTACGAAGGTCTTCAGATCCAAGGACTACAATCCG
CTTTTGTGGGTTTTCAAGCAACTTTTTGCATCCGTGGAGGCAACGAAACC
CCCGTCTTCTCGAAATGTTTCCGCAGAAATCTTCGTTGTTTGTCGGAATT
ACAAGGCACCAAAGCGCATTGATCCGAAGTTCCTCGATCCTAAGCACGTC
TTCGCAGAACTTGCGGACCCTACCCCCAACAATGAGGCTAAGGTGTTCAA
CCCGGAGAAGAAGAAGCGCAAGAGAGAGGGTTACGAAGAGGGCGATTATA
CGCAATTCAAGGAGATCCCAGTTACCGAGTTCATCAACACCACTGATCCG
ATTGCCATCCTGGGTTCATACAACAAACTCAGTTTTCAACAGTCACCAAG
TGGCGACCTTGCTCTCGCCACACTGGAGAGACTGGAAGATACGACCGACG
AGATCAAAGCCTGCTGTGAGGATCTCAAGGTTCTGGGTAAGAAGGAGTTC
CGAAACCTGCTCAGGTGGCGACTGAAAGTGCGGGAGAAGTTTGGTCTCGC
TGTGAAGAAGGGGGCCCAAACCAAGGAGGATGAGACTGAAGAAGTGGCGG
AGGTCGCTCCCATGGATGATGAGCTGGCCATTCAAGAGGAGTTGATGCGC
CTTCGTGAGAAGGAAACCTCAAAGCAAAAGAAAGAGCGCCGCAAGGAGAA
CGAGAGGAAGCGCAAGGAAATCGTCCGGTTACAGATGCACATGACGACCC
CCATGGATATCGGAAAGGAGCAACTGGGACCTAATGGCGAGGATGCTACA
TTCTCGCTCAAGCGCGCCGAGAGAGGCGGAGTTAGGGACACCATTGCCGC
CGGCCATGAAGCGTCGATTGAAAGTGATAGCGAGGACAGTGCTTCCGAGT
CTGAGACCGAGGAGAGCGATGACGAGGAAGACCGTCTGGAGCGGGAACTT
GACAACCTGTACGAGCAATACCAGGACCGCAAGGAAGACCGGGACACGAA
GTTACGGGCAAAGAAGGCCAGGAAGGACTTCGAAGCCGACTCCTGGGACG
GCTTTTCCGATTCTGACAAGGAAGAAGGTGAAGACTCCGATGATGAGGGT
CTTGGAGTTAGCTCTGCCGTCGACAAAGCTCCCAAGTCAGCTTCCCTTTC
CAACAGTGCCTCGCTATTCTTCGACCAAGATATATTCCAAGGCCTAGAAG
ACATTGACGATGTGGAGGACGAAGATGAGGAAGTGGAGGATGAAGATAGC
GCCATCGAAGTTAAGGAGGATCGGCCTAAGGGCAAGGAGTCTGAAAAGAA
AAAGGCAAAGGAATCGAAGAAACCTGTGCAGGCGATGGAAGACTCGGACG
AAGAAGATCTTGAAGAGCTTGAGGATCCACGGAAAAAGAATGGACAGCTC
GCATGGTAAAGGTCGTTTGGATAAGTGGTATCGCCTGGCGAAGGAGAAGG
GATACAGAGCGAGAGCTGCTTTCAAGCTGATCCAGCTGAACAAGAAGTAT
GGCTTTCTGGAGAAGAGCAAAGTCGTTCTCGATCTTTGCGCGGCACCCGG
TATGTGGAGAAGGCCAGGAAAGGATCCATCCAGGCCGCCGATAACTTTTT
TTCCTGGATACATTCTCTTGTACCGCTCTCACCATTCCTACCCACTTGCA
TCCGCACTTCTTTGCTTAGCGGTTTCGGTTTTTCGTCGAGTGTGCCTCGA
CCTCCCATCTCTCAAGATGGCGATTCAGAAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008649 | rRNA methyltransferase activity |
| GO:0008168 | methyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0001510 | RNA methylation |
| GO:0031167 | rRNA methylation |
| GO:0006364 | rRNA processing |
| GO:0032259 | methylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011383-T1.utr3p1 | KJC3_011383-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011383-T1.utr5p1 | KJC3_011383-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260V5Q |
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR015507 |
| DBxref | InterPro:IPR028589 |
| DBxref | InterPro:IPR024576 |
| DBxref | InterPro:IPR012920 |
| DBxref | InterPro:IPR002877 |
| DBxref | PFAM:PF07780 |
| DBxref | PFAM:PF01728 |
| DBxref | PFAM:PF11861 |
| Product | AdoMet-dependent rRNA methyltransferase spb1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:456573..459717 - |
|
