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KJC3_011394-T1, KJC3_011394-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011394-T1
Unique NameKJC3_011394-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:496951..497420-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011394-T1 ID=KJC3_011394-T1|Name=KJC3_011394-T1|organism=Aspergillus niger KJC3|type=mRNA|length=470bp|location=Sequence derived from alignment at ch8:496951..497420- (Aspergillus niger KJC3)
ATGGGTCCCCCTAGGCGCAAGGTTCTCGCTACGGCGGAAGAGACCATGTT
CCCGCCGGATGAGCTGTCTCAGGGCCATCTAATTGCCCGGGCTATCAAGG
CGACCGGAAACAACATCTACTCGGTGGAACTTCCCTCGAAGGAGTCGGTT
TTGGTGGAGCTCCCTGCCCGCTTCCGATCGACCATCTGGATCAAGCGGGG
TTCCTACGTGGTCATCGATACCAATGCTCTTGAGGGCCGCGACAACAAGC
TCAAGGGAGAAATAGTCAACATCGTTCGTGATGAGAAAGCGTGGCGCAAA
GCCCCGTTTTGGTGAGTGGATCCCTCAATCGCGGTGCCTGGGGCTACTAC
TGATCCCTCTGCAGGCCAAAGGAGTTCGCTAAGCAAGCTGCTGTTGTCGC
CGACGACTCGGACGAAGAGGATGAGTCCAATGTCGGCAAGATGCCTTCTT
CCGATGAGTCGGATGCTTGA
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Coding sequence (CDS) from alignment at ch8:496951..497420-

>KJC3_011394-T1 ID=KJC3_011394-T1|Name=KJC3_011394-T1|organism=Aspergillus niger KJC3|type=CDS|length=834bp|location=Sequence derived from alignment at ch8:496951..497420- (Aspergillus niger KJC3)
GCCAAAGGAGTTCGCTAAGCAAGCTGCTGTTGTCGCCGACGACTCGGACG
AAGAGGATGAGTCCAATGTCGGCAAGATGCCTTCTTCCGATGAGTCGGAT
GCTTGAATGGGTCCCCCTAGGCGCAAGGTTCTCGCTACGGCGGAAGAGAC
CATGTTCCCGCCGGATGAGCTGTCTCAGGGCCATCTAATTGCCCGGGCTA
TCAAGGCGACCGGAAACAACATCTACTCGGTGGAACTTCCCTCGAAGGAG
TCGGTTTTGGTGGAGCTCCCTGCCCGCTTCCGATCGACCATCTGGATCAA
GCGGGGTTCCTACGTGGTCATCGATACCAATGCTCTTGAGGGCCGCGACA
ACAAGCTCAAGGGAGAAATAGTCAACATCGTTCGTGATGAGAAAGCGTGG
CGCAAAGCCCCGTTTTGGCCAAAGGAGTTCGCTAAGCAAGCTGCTGTTGT
CGCCGACGACTCGGACGAAGAGGATGAGTCCAATGTCGGCAAGATGCCTT
CTTCCGATGAGTCGGATGCTTGAATGGGTCCCCCTAGGCGCAAGGTTCTC
GCTACGGCGGAAGAGACCATGTTCCCGCCGGATGAGCTGTCTCAGGGCCA
TCTAATTGCCCGGGCTATCAAGGCGACCGGAAACAACATCTACTCGGTGG
AACTTCCCTCGAAGGAGTCGGTTTTGGTGGAGCTCCCTGCCCGCTTCCGA
TCGACCATCTGGATCAAGCGGGGTTCCTACGTGGTCATCGATACCAATGC
TCTTGAGGGCCGCGACAACAAGCTCAAGGGAGAAATAGTCAACATCGTTC
GTGATGAGAAAGCGTGGCGCAAAGCCCCGTTTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011394KJC3_011394Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011394-T1KJC3_011394-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011394-T1.cdsKJC3_011394-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011394-T1.exon2KJC3_011394-T1.exon2Aspergillus niger KJC3exon
KJC3_011394-T1.exon1KJC3_011394-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR006196
DBxrefInterPro:IPR001253
DBxrefPFAM:PF01176
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:496951..497420 -
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